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| PREV NEXT | FRAMES NO FRAMES | |||||||||
| org.apache.* |
|---|
| org.apache.ctakes.assertion.attributes.subject.SubjectAttributeClassifier | ||
|---|---|---|
public static final java.lang.String |
DONOR_DEPPATH |
"donor_deppath" |
public static final java.lang.String |
DONOR_DEPTOK |
"donor_depsrl" |
public static final java.lang.String |
DONOR_OR |
"donor_or" |
public static final java.lang.String |
DONOR_SRLARG |
"donor_srlarg" |
public static final java.lang.String |
DONOR_TOKEN |
"donor_token" |
public static final java.lang.String |
FAMILY_DEPPATH |
"family_deppath" |
public static final java.lang.String |
FAMILY_DEPTOK |
"family_depsrl" |
public static final java.lang.String |
FAMILY_OR |
"family_or" |
public static final java.lang.String |
FAMILY_SRLARG |
"family_srlarg" |
public static final java.lang.String |
FAMILY_TOKEN |
"family_token" |
public static final java.lang.String |
OTHER_DEPPATH |
"other_deppath" |
public static final java.lang.String |
OTHER_DEPTOK |
"other_depsrl" |
public static final java.lang.String |
OTHER_OR |
"other_or" |
public static final java.lang.String |
OTHER_SRLARG |
"other_srlarg" |
public static final java.lang.String |
OTHER_TOKEN |
"other_token" |
| org.apache.ctakes.assertion.cr.GoldEntityAndAttributeReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
| org.apache.ctakes.assertion.cr.I2B2Challenge2010CollectionReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_FNMATCH |
"fnMatch" |
public static final java.lang.String |
PARAM_INPUTDIR |
"inputDir" |
| org.apache.ctakes.assertion.cr.XmiCollectionReaderCtakes | ||
|---|---|---|
public static final java.lang.String |
PARAM_FAILUNKNOWN |
"FailOnUnknownType" |
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
| org.apache.ctakes.assertion.eval.AssertionEvaluation | ||
|---|---|---|
public static final java.lang.String |
GOLD_VIEW_NAME |
"GoldView" |
| org.apache.ctakes.assertion.eval.XMIReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_FILES |
"files" |
| org.apache.ctakes.assertion.medfacts.ConceptLookup | ||
|---|---|---|
public static final java.lang.String |
REVERSE_LOOKUP_PROBLEM_TUI |
"T019" |
public static final java.lang.String |
REVERSE_LOOKUP_TEST_TUI |
"T059" |
public static final java.lang.String |
REVERSE_LOOKUP_TREATMENT_TUI |
"T116" |
| org.apache.ctakes.assertion.medfacts.cleartk.AssertionCleartkAnalysisEngine | ||
|---|---|---|
public static final java.lang.String |
PARAM_GOLD_VIEW_NAME |
"GoldViewName" |
public static final java.lang.String |
PARAM_PRINT_ERRORS |
"PrintErrors" |
public static final java.lang.String |
PARAM_PROBABILITY_OF_KEEPING_DEFAULT_EXAMPLE |
"ProbabilityOfKeepingADefaultExample" |
| org.apache.ctakes.assertion.medfacts.cleartk.TrainAssertionModel | ||
|---|---|---|
public static final java.lang.String |
PARAM_NAME_DECODING_INPUT_DIRECTORY |
"decoding-input-directory" |
public static final java.lang.String |
PARAM_NAME_DECODING_OUTPUT_DIRECTORY |
"decoding-output-directory" |
public static final java.lang.String |
PARAM_NAME_MODEL_DIRECTORY |
"model-directory" |
public static final java.lang.String |
PARAM_NAME_TRAINING_INPUT_DIRECTORY |
"training-input-directory" |
| org.apache.ctakes.chunker.ae.Chunker | ||
|---|---|---|
public static final java.lang.String |
CHUNKER_CREATOR_CLASS_PARAM |
"ChunkCreatorClass" |
public static final java.lang.String |
CHUNKER_MODEL_FILE_PARAM |
"ChunkerModelFile" |
| org.apache.ctakes.chunker.ae.adjuster.ChunkAdjuster | ||
|---|---|---|
public static final java.lang.String |
PARAM_CHUNK_PATTERN |
"ChunkPattern" |
public static final java.lang.String |
PARAM_EXTEND_TO_INCLUDE_TOKEN |
"IndexOfTokenToInclude" |
| org.apache.ctakes.constituency.parser.ae.ConstituencyParser | ||
|---|---|---|
public static final java.lang.String |
defaultModel |
"org/apache/ctakes/constituency/parser/models/sharpacq-1.5.bin" |
public static final java.lang.String |
PARAM_MODELFILE |
"modelFilename" |
| org.apache.ctakes.core.ae.OverlapAnnotator | ||
|---|---|---|
public static final byte |
OVERLAP_A_ENV_B |
3 |
public static final byte |
OVERLAP_B_ENV_A |
4 |
public static final byte |
OVERLAP_EXACT |
2 |
public static final byte |
OVERLAP_NONE |
0 |
public static final byte |
OVERLAP_PARTIAL |
1 |
| org.apache.ctakes.core.ae.org.apache.ctakes.core.ae.OverlapAnnotator.DeleteActionImpl | ||
|---|---|---|
public static final byte |
SELECT_A |
0 |
public static final byte |
SELECT_A_B |
2 |
public static final byte |
SELECT_B |
1 |
| org.apache.ctakes.core.ae.org.apache.ctakes.core.ae.OverlapAnnotator.ModifyActionImpl | ||
|---|---|---|
public static final byte |
SELECT_A |
0 |
public static final byte |
SELECT_B |
1 |
| org.apache.ctakes.core.ae.SentenceDetector | ||
|---|---|---|
public static final java.lang.String |
PARAM_SEGMENTS_TO_SKIP |
"SegmentsToSkip" |
| org.apache.ctakes.core.ae.SHARPKnowtatorXMLReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_SET_DEFAULTS |
"SetDefaults" |
public static final java.lang.String |
PARAM_TEXT_DIRECTORY |
"TextDirectory" |
| org.apache.ctakes.core.ae.TokenizerAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_SEGMENTS_TO_SKIP |
"SegmentsToSkip" |
public static final int |
TOKEN_CAP_ALL |
3 |
public static final int |
TOKEN_CAP_FIRST_ONLY |
1 |
public static final int |
TOKEN_CAP_MIXED |
2 |
public static final int |
TOKEN_CAP_NONE |
0 |
public static final int |
TOKEN_NUM_POS_FIRST |
1 |
public static final int |
TOKEN_NUM_POS_LAST |
3 |
public static final int |
TOKEN_NUM_POS_MIDDLE |
2 |
public static final int |
TOKEN_NUM_POS_NONE |
0 |
public static final int |
TOKEN_NUM_TYPE_DECIMAL |
2 |
public static final int |
TOKEN_NUM_TYPE_INTEGER |
1 |
public static final int |
TOKEN_NUM_TYPE_UNKNOWN |
0 |
| org.apache.ctakes.core.ae.TokenizerAnnotatorPTB | ||
|---|---|---|
public static final java.lang.String |
PARAM_SEGMENTS_TO_SKIP |
"SegmentsToSkip" |
| org.apache.ctakes.core.cc.FilesInDirectoryCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTDIR |
"OutputDirectory" |
| org.apache.ctakes.core.cc.NormalizedFilesInDirectoryCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTDIR |
"OutputDirectory" |
| org.apache.ctakes.core.cc.TokenFreqCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_WORD_FREQ_FILE |
"TokenFreqFile" |
| org.apache.ctakes.core.cc.TokenOffsetsCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTDIR |
"OutputDirectory" |
| org.apache.ctakes.core.cc.XmiWriterCasConsumerCtakes | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTDIR |
"OutputDirectory" |
| org.apache.ctakes.core.cr.FilesInDirectoryCollectionCyclicalReads | ||
|---|---|---|
public static final java.lang.String |
PARAM_ENCODING |
"Encoding" |
public static final java.lang.String |
PARAM_EXTENSIONS |
"Extensions" |
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
public static final java.lang.String |
PARAM_LANGUAGE |
"Language" |
public static final java.lang.String |
PARAM_NUMREADS |
"NumberOfIterations" |
public static final java.lang.String |
PARAM_RECURSE |
"Recurse" |
| org.apache.ctakes.core.cr.FilesInDirectoryCollectionReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_ENCODING |
"Encoding" |
public static final java.lang.String |
PARAM_EXTENSIONS |
"Extensions" |
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
public static final java.lang.String |
PARAM_LANGUAGE |
"Language" |
public static final java.lang.String |
PARAM_RECURSE |
"Recurse" |
| org.apache.ctakes.core.cr.JdbcCollectionReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_DB_CONN_RESRC |
"DbConnResrcName" |
public static final java.lang.String |
PARAM_DOCID_COLS |
"DocIdColNames" |
public static final java.lang.String |
PARAM_DOCID_DELIMITER |
"DocIdDelimiter" |
public static final java.lang.String |
PARAM_DOCTEXT_COL |
"DocTextColName" |
public static final java.lang.String |
PARAM_SQL |
"SqlStatement" |
public static final java.lang.String |
PARAM_VALUE_FILE_RESRC |
"ValueFileResrcName" |
| org.apache.ctakes.core.cr.LinesFromFileCollectionReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_COMMENT_STRING |
"CommentString" |
public static final java.lang.String |
PARAM_ID_DELIMETER |
"IdDelimeter" |
public static final java.lang.String |
PARAM_IGNORE_BLANK_LINES |
"IgnoreBlankLines" |
public static final java.lang.String |
PARAM_INPUT_FILE_NAME |
"InputFileName" |
public static final java.lang.String |
PARAM_LANGUAGE |
"Language" |
| org.apache.ctakes.core.cr.XmiCollectionReaderCtakes | ||
|---|---|---|
public static final java.lang.String |
PARAM_FAILUNKNOWN |
"FailOnUnknownType" |
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
| org.apache.ctakes.core.cr.XMIReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_FILES |
"files" |
| org.apache.ctakes.core.fsm.output.StatusIndicator | ||
|---|---|---|
public static final int |
FAMILY_HISTORY_STATUS |
2 |
public static final int |
HISTORY_STATUS |
1 |
public static final int |
PROBABLE_STATUS |
3 |
| org.apache.ctakes.core.fsm.token.WordToken | ||
|---|---|---|
public static final byte |
CAPS_ALL |
4 |
public static final byte |
CAPS_FIRST_ONLY |
3 |
public static final byte |
CAPS_MIXED |
2 |
public static final byte |
CAPS_NONE |
1 |
public static final byte |
CAPS_UNKNOWN |
0 |
public static final byte |
NUM_FIRST |
1 |
public static final byte |
NUM_LAST |
3 |
public static final byte |
NUM_MIDDLE |
2 |
public static final byte |
NUM_NONE |
0 |
| org.apache.ctakes.core.nlp.tokenizer.Token | ||
|---|---|---|
public static final byte |
CAPS_ALL |
4 |
public static final byte |
CAPS_FIRST_ONLY |
3 |
public static final byte |
CAPS_MIXED |
2 |
public static final byte |
CAPS_NONE |
1 |
public static final byte |
CAPS_UNKNOWN |
0 |
public static final byte |
NUM_FIRST |
1 |
public static final byte |
NUM_LAST |
3 |
public static final byte |
NUM_MIDDLE |
2 |
public static final byte |
NUM_NONE |
0 |
public static final byte |
TYPE_CONTRACTION |
5 |
public static final byte |
TYPE_EOL |
4 |
public static final byte |
TYPE_NUMBER |
2 |
public static final byte |
TYPE_PUNCT |
3 |
public static final byte |
TYPE_SYMBOL |
6 |
public static final byte |
TYPE_UNKNOWN |
0 |
public static final byte |
TYPE_WORD |
1 |
| org.apache.ctakes.core.nlp.tokenizer.TokenizerHelper | ||
|---|---|---|
static final char |
APOSTROPHE |
39 |
static final char |
COMMA |
44 |
static final char |
CR |
13 |
static final char |
HYPHEN_OR_MINUS_SIGN |
45 |
static final char |
NEWLINE |
10 |
static final char |
PERIOD |
46 |
| org.apache.ctakes.core.resource.JdbcConnectionResourceImpl | ||
|---|---|---|
public static final java.lang.String |
PARAM_DRIVER_CLASS |
"DriverClassName" |
public static final java.lang.String |
PARAM_ISOLATION |
"TransactionIsolation" |
public static final java.lang.String |
PARAM_KEEP_ALIVE |
"KeepConnectionAlive" |
public static final java.lang.String |
PARAM_PASSWORD |
"Password" |
public static final java.lang.String |
PARAM_URL |
"URL" |
public static final java.lang.String |
PARAM_USERNAME |
"Username" |
| org.apache.ctakes.core.sentence.SentenceDetectorCtakes | ||
|---|---|---|
public static final java.lang.String |
NO_SPLIT |
"F" |
public static final java.lang.String |
SPLIT |
"T" |
| org.apache.ctakes.coreference.cc.ODIEVectorFileWriter | ||
|---|---|---|
public static final java.lang.String |
PARAM_FRAGS |
"treeFrags" |
public static final java.lang.String |
PARAM_GOLD_DIR |
"goldStandardDir" |
public static final java.lang.String |
PARAM_OUTPUT_DIR |
"outputDir" |
public static final java.lang.String |
PARAM_STOPS |
"stopWords" |
public static final java.lang.String |
PARAM_TREES |
"writeTrees" |
public static final java.lang.String |
PARAM_VECTORS |
"writeVectors" |
| org.apache.ctakes.coreference.util.CorefConsts | ||
|---|---|---|
public static final double |
COREF_THRESHOLD |
0.5 |
public static final java.lang.String |
DEM |
"dem" |
public static final java.lang.String |
NE |
"ne" |
public static final int |
NEDIST |
20 |
public static final int |
PRODIST |
3 |
public static final java.lang.String |
PRON |
"pronoun" |
public static final int |
SENTDIST |
20 |
public static final int |
TOKDIST |
600 |
| org.apache.ctakes.coreference.util.SvmVectorCreator | ||
|---|---|---|
static final int |
NUM_WIKI_HITS |
5 |
| org.apache.ctakes.dependency.parser.ae.ClearNLPDependencyParserAE | ||
|---|---|---|
public static final java.lang.String |
DEFAULT_MODEL_FILE_NAME |
"org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar" |
public static final java.lang.String |
ENG_LEMMATIZER_DATA_FILE |
"org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar" |
final java.lang.String |
language |
"en" |
public static final java.lang.String |
PARAM_LEMMATIZER_DATA_FILE |
"LemmatizerDataFile" |
public static final java.lang.String |
PARAM_PARSER_MODEL_FILE_NAME |
"ParserModelFileName" |
public static final java.lang.String |
PARAM_USE_LEMMATIZER |
"UseLemmatizer" |
| org.apache.ctakes.dependency.parser.ae.ClearNLPPOSTaggerAE | ||
|---|---|---|
public static final java.lang.String |
DEFAULT_MODEL_FILE_NAME |
"org/apache/ctakes/dependency/parser/models/pos/mayo-en-pos-1.3.0.tgz" |
final java.lang.String |
language |
"en" |
public static final java.lang.String |
PARAM_PARSER_MODEL_FILE_NAME |
"ParserModelFileName" |
| org.apache.ctakes.dependency.parser.ae.ClearNLPSemanticRoleLabelerAE | ||
|---|---|---|
public static final java.lang.String |
DEFAULT_PRED_MODEL_FILE_NAME |
"org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar" |
public static final java.lang.String |
DEFAULT_ROLE_MODEL_FILE_NAME |
"org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar" |
public static final java.lang.String |
DEFAULT_SRL_MODEL_FILE_NAME |
"org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar" |
final java.lang.String |
language |
"en" |
public static final java.lang.String |
PARAM_LEMMATIZER_DATA_FILE |
"LemmatizerDataFile" |
public static final java.lang.String |
PARAM_PARSER_MODEL_FILE_NAME |
"ParserModelFileName" |
public static final java.lang.String |
PARAM_PRED_MODEL_FILE_NAME |
"ParserPredFileName" |
public static final java.lang.String |
PARAM_ROLE_MODEL_FILE_NAME |
"ParserRoleFileName" |
| org.apache.ctakes.dependency.parser.ae.util.WriteClearNLPDescriptors | ||
|---|---|---|
public static final java.lang.String |
DEP_NAME |
"ClearNLPDependencyParser" |
public static final java.lang.String |
LVG_BASE_TOKEN_ANNOTATOR_PATH |
"desc/analysis_engine/LvgBaseTokenAnnotator.xml" |
public static final java.lang.String |
POS_TAGGER_PATH |
"../ctakes-pos-tagger/desc/POSTagger.xml" |
public static final java.lang.String |
SENTENCE_DETECTOR_PATH |
"../ctakes-core/desc/analysis_engine/SentenceDetectorAnnotator.xml" |
public static final java.lang.String |
SIMPLE_SEGMENTER_PATH |
"../ctakes-clinical-pipeline/desc/analysis_engine/SimpleSegmentAnnotator.xml" |
public static final java.lang.String |
SRL_NAME |
"ClearNLPSRL" |
public static final java.lang.String |
TOKENIZER_PATH |
"../ctakes-core/desc/analysis_engine/TokenizerAnnotator.xml" |
| org.apache.ctakes.dependency.parser.ae.util.XMIReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_FILES |
"files" |
| org.apache.ctakes.dependency.parser.cr.DependencyFileCollectionReader | ||
|---|---|---|
public static final java.lang.String |
DEPENDENCY_FILE_PARAM |
"DependencyFile" |
public static final java.lang.String |
INPUT_FORMAT_PARAM |
"InputFormat" |
public static final java.lang.String |
TRAINING_MODE_PARAM |
"TrainingMode" |
| org.apache.ctakes.dictionary.assertion.CreateAssertionLuceneIndexFromDelimitedFile | ||
|---|---|---|
public static final java.lang.String |
CUE_PHRASE_CATEGORY_FIELD_NAME |
"cuePhraseCategory" |
public static final java.lang.String |
CUE_PHRASE_FAMILY_FIELD_NAME |
"cuePhraseFamily" |
public static final java.lang.String |
CUE_PHRASE_FIELD_NAME |
"cuePhrase" |
public static final java.lang.String |
CUE_PHRASE_FIRST_WORD_FIELD_NAME |
"cuePhraseFirstWord" |
| org.apache.ctakes.dictionary.lookup.MetaDataHitConst | ||
|---|---|---|
public static final int |
EQ_OP |
0 |
public static final int |
FLOAT_TYPE |
1 |
public static final int |
GT_OP |
3 |
public static final int |
GTEQ_OP |
4 |
public static final int |
INTEGER_TYPE |
0 |
public static final int |
LT_OP |
1 |
public static final int |
LTEQ_OP |
2 |
public static final int |
STRING_TYPE |
2 |
| org.apache.ctakes.dictionary.lookup.ae.AssertionCuePhraseConsumerImpl | ||
|---|---|---|
public static final java.lang.String |
CUE_PHRASE_CATEGORY_FIELD_NAME |
"cuePhraseCategory" |
public static final java.lang.String |
CUE_PHRASE_FAMILY_FIELD_NAME |
"cuePhraseFamily" |
public static final java.lang.String |
CUE_PHRASE_FIELD_NAME |
"cuePhrase" |
public static final java.lang.String |
CUE_PHRASE_FIRST_WORD_FIELD_NAME |
"cuePhraseFirstWord" |
| org.apache.ctakes.dictionary.lookup.algorithms.FirstTokenPermutationImpl | ||
|---|---|---|
public static final java.lang.String |
CTX_KEY_WINDOW_ANNOTATIONS |
"WINDOW_ANNOTATIONS" |
public static final java.lang.String |
LT_KEY_USE_FOR_LOOKUP |
"USE_FOR_LOOKUP" |
| org.apache.ctakes.dictionary.lookup.filter.PostLookupFilterGroupImpl | ||
|---|---|---|
public static final int |
AND_RELATION |
1 |
public static final int |
OR_RELATION |
0 |
| org.apache.ctakes.dictionary.lookup.strtable.FieldConstraintImpl | ||
|---|---|---|
public static final int |
EQ_OP |
0 |
public static final int |
GT_OP |
3 |
public static final int |
GTEQ_OP |
4 |
public static final int |
LT_OP |
1 |
public static final int |
LTEQ_OP |
2 |
| org.apache.ctakes.drugner.ae.CopyDrugAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_SEGMENTS_TO_SKIP |
"sectionOverrideSet" |
| org.apache.ctakes.drugner.ae.DrugMentionAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_SEGMENTS_MEDICATION_RELATED |
"medicationRelatedSection" |
| org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl | ||
|---|---|---|
public static final java.lang.String |
NEGATION_IND_FSM_CLASS |
"NegationIndicatorFSMClass" |
public static final java.lang.String |
PARAM_ANNOTATION_TYPE |
"AnnotationType" |
| org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTDIR |
"OutputDirectory" |
| org.apache.ctakes.drugner.elements.DrugChangeStatusElement | ||
|---|---|---|
public static final java.lang.String |
DECREASE_STATUS |
"decrease" |
public static final java.lang.String |
INCREASE_STATUS |
"increase" |
public static final java.lang.String |
MAXIMUM_STATUS |
"maximum" |
public static final java.lang.String |
NOCHANGE_STATUS |
"noChange" |
public static final java.lang.String |
START_STATUS |
"start" |
public static final java.lang.String |
STOP_STATUS |
"stop" |
public static final java.lang.String |
SUMMATION_STATUS |
"add" |
| org.apache.ctakes.drugner.elements.FormElement | ||
|---|---|---|
public static final java.lang.String |
AEROSOL |
"aerosol" |
public static final java.lang.String |
CAPSULE |
"capsule" |
public static final java.lang.String |
CREAM |
"cream" |
public static final java.lang.String |
ELIXIR |
"elixir" |
public static final java.lang.String |
EMULSION |
"emulsion" |
public static final java.lang.String |
ENEMA |
"enema" |
public static final java.lang.String |
GEL |
"gel" |
public static final java.lang.String |
IMPLANT |
"implant" |
public static final java.lang.String |
INHALANT |
"inhalant" |
public static final java.lang.String |
INJECTION |
"injection" |
public static final java.lang.String |
LIQUID |
"liquid" |
public static final java.lang.String |
LOTION |
"lotion" |
public static final java.lang.String |
LOZENGE |
"lozenge" |
public static final java.lang.String |
OINTMENT |
"ointment" |
public static final java.lang.String |
PATCH |
"patch" |
public static final java.lang.String |
PILL |
"pill" |
public static final java.lang.String |
POWDER |
"powder" |
public static final java.lang.String |
SHAMPOO |
"shampoo" |
public static final java.lang.String |
SOAP |
"soap" |
public static final java.lang.String |
SOLUTION |
"solution" |
public static final java.lang.String |
SPRAY |
"spray" |
public static final java.lang.String |
SUPPOSITORY |
"suppository" |
public static final java.lang.String |
SYRINGE |
"syringe" |
public static final java.lang.String |
SYRUP |
"syrup" |
public static final java.lang.String |
TABLET |
"tablet" |
| org.apache.ctakes.drugner.elements.FrequencyUnitElement | ||
|---|---|---|
public static final java.lang.String |
ASNEEDED |
"as-needed" |
public static final java.lang.String |
DAILY |
"day" |
public static final java.lang.String |
EVERYOTHERDAY |
"every-other-day" |
public static final java.lang.String |
HOURLY |
"hour" |
public static final java.lang.String |
MONTHLY |
"month" |
public static final java.lang.String |
OTHER |
"other" |
public static final java.lang.String |
WEEKLY |
"week" |
| org.apache.ctakes.drugner.elements.RouteElement | ||
|---|---|---|
public static final java.lang.String |
GASTRIC |
"Enteral_Gastric" |
public static final java.lang.String |
INTRAARTERIAL |
"Parenteral_Intra-arterial" |
public static final java.lang.String |
INTRACARDIAC |
"Parenteral_Intracardiac" |
public static final java.lang.String |
INTRAMUSCULAR |
"Parenteral_Intramuscular" |
public static final java.lang.String |
INTRAPERITONEAL |
"Parenteral_Intraperitoneal" |
public static final java.lang.String |
INTRATHECAL |
"Parenteral_Intrathecal" |
public static final java.lang.String |
INTRAVENOUS |
"Parenteral_Intravenous" |
public static final java.lang.String |
ORAL |
"Enteral_Oral" |
public static final java.lang.String |
RECTAL |
"Enteral_Rectal" |
public static final java.lang.String |
SUBCUTANEOUS |
"Parenteral_Subcutaneous" |
public static final java.lang.String |
TOPICAL |
"Topical" |
public static final java.lang.String |
TRANSDERMAL |
"Parenteral_Transdermal" |
public static final java.lang.String |
TRANSMUCOSAL |
"Parenteral_Transmucosal" |
| org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken | ||
|---|---|---|
public static final java.lang.String |
DECREASE |
"decrease" |
public static final java.lang.String |
DECREASEFROM |
"decreasefrom" |
public static final java.lang.String |
INCREASE |
"increase" |
public static final java.lang.String |
INCREASEFROM |
"increasefrom" |
public static final java.lang.String |
MAX |
"maximum" |
public static final java.lang.String |
NOCHANGE |
"noChange" |
public static final java.lang.String |
OTHER |
"change" |
public static final java.lang.String |
START |
"start" |
public static final java.lang.String |
STOP |
"stop" |
public static final java.lang.String |
SUM |
"add" |
| org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken | ||
|---|---|---|
public static final double |
QUANTITY_24 |
24.0 |
public static final double |
QUANTITY_BIWEEKLY |
0.07 |
public static final double |
QUANTITY_EIGHT |
8.0 |
public static final double |
QUANTITY_ELEVEN |
11.0 |
public static final double |
QUANTITY_EVERY_OTHER_DAY |
0.5 |
public static final double |
QUANTITY_FIVE |
5.0 |
public static final double |
QUANTITY_FOUR |
4.0 |
public static final double |
QUANTITY_MONTHLY |
0.03 |
public static final double |
QUANTITY_NINE |
9.0 |
public static final double |
QUANTITY_ONE |
1.0 |
public static final double |
QUANTITY_PRN |
0.0 |
public static final double |
QUANTITY_SEVEN |
7.0 |
public static final double |
QUANTITY_SIX |
6.0 |
public static final double |
QUANTITY_TEN |
10.0 |
public static final double |
QUANTITY_THREE |
3.0 |
public static final double |
QUANTITY_TWO |
2.0 |
public static final double |
QUANTITY_WEEKLY |
0.14 |
public static final double |
QUANTITY_YEARLY |
0.0030 |
| org.apache.ctakes.drugner.fsm.output.elements.RouteToken | ||
|---|---|---|
public static final int |
GASTRIC |
2 |
public static final int |
INTRAARTERIAL |
5 |
public static final int |
INTRACARDIAC |
7 |
public static final int |
INTRAMUSCULAR |
6 |
public static final int |
INTRAPERITONEAL |
10 |
public static final int |
INTRATHECAL |
9 |
public static final int |
INTRAVENOUS |
4 |
public static final int |
ORAL |
1 |
public static final int |
RECTAL |
3 |
public static final int |
SUBCUTANEOUS |
8 |
public static final int |
TOPICAL |
0 |
public static final int |
TRANSDERMAL |
11 |
public static final int |
TRANSMUCOSAL |
12 |
| org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator | ||
|---|---|---|
public static final int |
CONFIRMED_STATUS |
0 |
public static final int |
FAMILY_HISTORY_STATUS |
2 |
public static final int |
HISTORY_STATUS |
1 |
public static final int |
PROBABLE_STATUS |
3 |
| org.apache.ctakes.lvg.ae.LvgAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_LEMMA_CACHE_FILE_LOCATION |
"LemmaCacheFileLocation" |
public static final java.lang.String |
PARAM_LEMMA_CACHE_FREQUENCY_CUTOFF |
"LemmaCacheFrequencyCutoff" |
public static final java.lang.String |
PARAM_POST_LEMMAS |
"PostLemmas" |
public static final java.lang.String |
PARAM_USE_LEMMA_CACHE |
"UseLemmaCache" |
| org.apache.ctakes.lvg.ae.LvgBaseTokenAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_LEMMA_CACHE_FILE_LOCATION |
"LemmaCacheFileLocation" |
public static final java.lang.String |
PARAM_LEMMA_CACHE_FREQUENCY_CUTOFF |
"LemmaCacheFrequencyCutoff" |
public static final java.lang.String |
PARAM_POST_LEMMAS |
"PostLemmas" |
public static final java.lang.String |
PARAM_USE_LEMMA_CACHE |
"UseLemmaCache" |
| org.apache.ctakes.necontexts.ContextAnnotator | ||
|---|---|---|
public static final int |
ALL_SCOPE |
4 |
public static final java.lang.String |
CONTEXT_ANALYZER_CLASS_PARAM |
"ContextAnalyzerClass" |
public static final java.lang.String |
CONTEXT_ANNOTATION_CLASS_PARAM |
"ContextAnnotationClass" |
public static final java.lang.String |
CONTEXT_HIT_CONSUMER_CLASS_PARAM |
"ContextHitConsumerClass" |
public static final java.lang.String |
FOCUS_ANNOTATION_CLASS_PARAM |
"FocusAnnotationClass" |
public static final int |
LEFT_SCOPE |
1 |
public static final java.lang.String |
MAX_LEFT_SCOPE_SIZE_PARAM |
"MaxLeftScopeSize" |
public static final java.lang.String |
MAX_RIGHT_SCOPE_SIZE_PARAM |
"MaxRightScopeSize" |
public static final int |
MIDDLE_SCOPE |
2 |
public static final int |
RIGHT_SCOPE |
3 |
public static final java.lang.String |
SCOPE_ORDER_PARAM |
"ScopeOrder" |
public static final java.lang.String |
WINDOW_ANNOTATION_CLASS_PARAM |
"WindowAnnotationClass" |
| org.apache.ctakes.necontexts.status.StatusContextAnalyzer | ||
|---|---|---|
public static final java.lang.String |
CTX_HIT_KEY_STATUS_TYPE |
"STATUS_TYPE" |
| org.apache.ctakes.padtermspotter.cc.PADOffSetsRecord | ||
|---|---|---|
public static final java.lang.String |
CAT_Scan |
"CT_EXAM" |
public static final java.lang.String |
CAT_Scan_one_side_only |
"CT_EXAM_SOLO" |
public static final java.lang.String |
COLLECTION_SEPARATOR |
"|" |
public static final java.lang.String |
COUNT_PLACE_HOLDER |
"@@COUNT@@" |
public static final java.lang.String |
FIELD_SEPARATOR |
":" |
public static final java.lang.String |
lower_extremity |
"LOWER_EXT" |
public static final java.lang.String |
OS_NAME |
"os.name" |
public static final java.lang.String |
OS_WINDOWS |
"Windows" |
public static final java.lang.String |
PARAM_ALTERNATE_ALGOR |
"usingAlternateAlgorithm" |
public static final java.lang.String |
PARAM_OUTPUTFILE |
"outputFileName" |
public static final java.lang.String |
ultrasound |
"US_EXAM" |
public static final java.lang.String |
ultrasound_lower_extremity |
"US_LOWER_EXT" |
public static final java.lang.String |
ultrasound_lower_extremity_one_side_only |
"US_LOWER_SOLO" |
| org.apache.ctakes.padtermspotter.cc.RadialogyTermLookup | ||
|---|---|---|
public static final java.lang.String |
PARAM_OUTPUTFILE |
"outputFileName" |
| org.apache.ctakes.padtermspotter.cr.RadiologyRecordsCollectionReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_COMMENT_STRING |
"CommentString" |
public static final java.lang.String |
PARAM_EXAM_COLUMN |
"FilterExamColumnNumber" |
public static final java.lang.String |
PARAM_FILTER_EXAMS |
"FilterExamTypes" |
public static final java.lang.String |
PARAM_ID_DELIMETER |
"IdDelimeter" |
public static final java.lang.String |
PARAM_IGNORE_BLANK_LINES |
"IgnoreBlankLines" |
public static final java.lang.String |
PARAM_INPUT_FILE_NAME |
"InputFileName" |
public static final java.lang.String |
PARAM_LANGUAGE |
"Language" |
public static final java.lang.String |
PARAM_TOTAL_COLUMNS |
"ColumnCount" |
| org.apache.ctakes.padtermspotter.fsm.output.IllnessDxIndicator | ||
|---|---|---|
public static final int |
BRAIN_STATUS |
5 |
public static final int |
BREAST_STATUS |
4 |
public static final int |
COLON_STATUS |
6 |
public static final int |
PAD_STATUS |
7 |
| org.apache.ctakes.padtermspotter.fsm.output.SubSectionIndicator | ||
|---|---|---|
public static final int |
CONFIRMED_STATUS |
0 |
public static final int |
FAMILY_HISTORY_STATUS |
2 |
public static final int |
NEGATED_STATUS |
1 |
public static final int |
PROBABLE_STATUS |
3 |
| org.apache.ctakes.padtermspotter.impl.DxContextAnalyzerImpl | ||
|---|---|---|
public static final java.lang.String |
CTX_HIT_KEY_ILLNESS_TYPE |
"ILLNESS_TYPE" |
| org.apache.ctakes.postagger.OpenNLPPOSCollectionReader | ||
|---|---|---|
public static final java.lang.String |
LOAD_WORDS_ONLY_PARAM |
"LoadWordsOnly" |
public static final java.lang.String |
POS_DATA_FILE_PARAM |
"PosDataFile" |
| org.apache.ctakes.postagger.POSTagger | ||
|---|---|---|
public static final java.lang.String |
CASE_SENSITIVE_PARAM |
"CaseSensitive" |
public static final java.lang.String |
POS_MODEL_FILE_PARAM |
"PosModelFile" |
public static final java.lang.String |
TAG_DICTIONARY_PARAM |
"TagDictionary" |
| org.apache.ctakes.preprocessor.ClinicalNotePreProcessor | ||
|---|---|---|
public static final java.lang.String |
MD_KEY_ADMIT_DATE |
"ADMIT_DATE" |
public static final java.lang.String |
MD_KEY_CUSTOMER_ID |
"CLINICAL_NUMBER" |
public static final java.lang.String |
MD_KEY_DISCHARGE_DATE |
"DISCHARGE_DATE" |
public static final java.lang.String |
MD_KEY_DOC_CONFIDENTIAL_IND |
"DOC_CONFIDENTIAL_IND" |
public static final java.lang.String |
MD_KEY_DOC_ID |
"DOC_ID" |
public static final java.lang.String |
MD_KEY_DOC_LINK_ID |
"DOC_LINK_ID" |
public static final java.lang.String |
MD_KEY_DOC_REVISION_ID |
"DOC_REVISION_ID" |
public static final java.lang.String |
MD_KEY_DOC_STATUS_CODE |
"DOC_STATUS_CODE" |
public static final java.lang.String |
MD_KEY_EVENT_TYPE_CODE |
"EVENT_TYPE_CODE" |
public static final java.lang.String |
MD_KEY_FACILITY_CODE |
"FACILITY_CODE" |
public static final java.lang.String |
MD_KEY_HISTORY_SECTION |
"HISTORY_SECTION" |
public static final java.lang.String |
MD_KEY_LOCATION |
"LOCATION" |
public static final java.lang.String |
MD_KEY_MINUTES_COUNSELING |
"MINUTES_COUNSELING" |
public static final java.lang.String |
MD_KEY_NOTE_DATE |
"NOTE_DATE" |
public static final java.lang.String |
MD_KEY_PATIENT_CITY |
"PATIENT_CITY" |
public static final java.lang.String |
MD_KEY_PATIENT_CNT |
"PATIENT_CNT" |
public static final java.lang.String |
MD_KEY_PATIENT_STATE |
"PATIENT_STATE" |
public static final java.lang.String |
MD_KEY_PATIENT_STREET_ADDR |
"PATIENT_ADDR" |
public static final java.lang.String |
MD_KEY_PATIENT_ZIP |
"PATIENT_ZIP" |
public static final java.lang.String |
MD_KEY_PROVIDER_ID |
"PROVIDER_ID" |
public static final java.lang.String |
MD_KEY_PROVIDER2_ID |
"PROVIDER2_ID" |
public static final java.lang.String |
MD_KEY_PT_BILLING_CODE |
"PT_BILLING_CODE" |
public static final java.lang.String |
MD_KEY_PT_BIRTH_DATE |
"PT_BIRTH_DATE" |
public static final java.lang.String |
MD_KEY_PT_BMI |
"PT_BMI" |
public static final java.lang.String |
MD_KEY_PT_BSA |
"PT_BSA" |
public static final java.lang.String |
MD_KEY_PT_GENDER |
"PT_GENDER" |
public static final java.lang.String |
MD_KEY_PT_HEAD_CIRCUMFERENCE |
"PT_HEAD_CIRCUMFERENCE" |
public static final java.lang.String |
MD_KEY_PT_HEIGHT |
"PT_HEIGHT" |
public static final java.lang.String |
MD_KEY_PT_RESPIRATORY_RATE |
"PT_RESPIRATORY_RATE" |
public static final java.lang.String |
MD_KEY_PT_TEMPERATURE |
"PT_TEMPERATURE" |
public static final java.lang.String |
MD_KEY_PT_WEIGHT |
"PT_WEIGHT" |
public static final java.lang.String |
MD_KEY_REV_DATE |
"REV_DATE" |
public static final java.lang.String |
MD_KEY_SERVICE_CODE |
"SERVICE_CODE" |
public static final java.lang.String |
MD_KEY_SIGNATURE_DATE |
"SIGNATURE_DATE" |
public static final java.lang.String |
MD_KEY_SIGNATURE_ID |
"SIGNATURE_ID" |
public static final java.lang.String |
MD_KEY_SITE_CODE |
"SITE_CODE" |
public static final java.lang.String |
MD_KEY_TOTAL_TIME |
"TOTAL_TIME" |
public static final java.lang.String |
MD_KEY_TRANSCRIBER_ID |
"TRANSCRIBER_ID" |
public static final java.lang.String |
MD_KEY_TRANSCRIPTION_DATE |
"TRANSCRIPTION_DATE" |
public static final int |
UNKNOWN_TABLE_TYPE |
0 |
| org.apache.ctakes.relationextractor.ae.EntityMentionPairRelationExtractorAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_CLASSIFY_BOTH_DIRECTIONS |
"ClassifyBothDirections" |
| org.apache.ctakes.relationextractor.ae.RelationExtractorAnnotator | ||
|---|---|---|
public static final java.lang.String |
NO_RELATION_CATEGORY |
"-NONE-" |
public static final java.lang.String |
PARAM_PROBABILITY_OF_KEEPING_A_NEGATIVE_EXAMPLE |
"ProbabilityOfKeepingANegativeExample" |
| org.apache.ctakes.relationextractor.ae.features.WordNetUtils | ||
|---|---|---|
public static final java.lang.String |
wordNetPath |
"/usr/share/wordnet" |
| org.apache.ctakes.relationextractor.cr.Constants | ||
|---|---|---|
public static final java.lang.String |
mipacqEntityMentionRole |
"" |
public static final java.lang.String |
mipacqModifierRole |
"" |
public static final java.lang.String |
shareEntityMentionRole |
"Argument" |
public static final java.lang.String |
shareModifierRole |
"Related_to" |
public static final java.lang.String |
sharpEntityMentionRole |
"" |
public static final java.lang.String |
sharpModifierRole |
"" |
| org.apache.ctakes.relationextractor.cr.GoldEntityAndRelationReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
| org.apache.ctakes.relationextractor.cr.GoldEntityReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_INPUTDIR |
"InputDirectory" |
| org.apache.ctakes.relationextractor.data.CategoricalDistribution | ||
|---|---|---|
public final int |
OUTCOME1 |
1 |
public final int |
OUTCOME2 |
2 |
public final int |
OUTCOME3 |
3 |
| org.apache.ctakes.relationextractor.data.Constants | ||
|---|---|---|
public static final java.lang.String |
mipacDevXmlPath |
"/home/dima/sharp/cloud/mipacq/xml/dev/" |
public static final java.lang.String |
mipacqAllXmlPath |
"/home/dima/sharp/cloud/mipacq/xml/all/" |
public static final java.lang.String |
mipacqTestXmlPath |
"/home/dima/sharp/cloud/mipacq/xml/test/" |
public static final java.lang.String |
mipacqTrainXmlPath |
"/home/dima/sharp/cloud/mipacq/xml/train/" |
public static final java.lang.String |
shareAllXmlPath |
"/home/dima/sharp/cloud/share/xml/all/" |
public static final java.lang.String |
shareDevXmlPath |
"/home/dima/sharp/cloud/share/xml/dev/" |
public static final java.lang.String |
shareTestXmlPath |
"/home/dima/sharp/cloud/share/xml/test/" |
public static final java.lang.String |
shareTrainXmlPath |
"/home/dima/sharp/cloud/share/xml/train/" |
public static final java.lang.String |
sharpAllXmlPath |
"/home/dima/sharp/cloud/sharp/xml/all/" |
public static final java.lang.String |
sharpDevXmlPath |
"/home/dima/sharp/cloud/sharp/xml/dev/" |
public static final java.lang.String |
sharpTestXmlPath |
"/home/dima/sharp/cloud/sharp/xml/test/" |
public static final java.lang.String |
sharpTrainXmlPath |
"/home/dima/sharp/cloud/sharp/xml/train/" |
| org.apache.ctakes.relationextractor.data.GoldAnnotationStatsCalculator | ||
|---|---|---|
public static final java.lang.String |
goldViewName |
"GoldView" |
| org.apache.ctakes.relationextractor.data.Splitter | ||
|---|---|---|
public final java.lang.String |
ALLFILELOC |
"/home/dima/sharp/cloud/share/xml/all/" |
public final java.lang.String |
DEVLOC |
"/home/dima/sharp/cloud/share/xml/dev/" |
public final java.lang.String |
TESTLOC |
"/home/dima/sharp/cloud/share/xml/test/" |
public final java.lang.String |
TRAINLOC |
"/home/dima/sharp/cloud/share/xml/train/" |
| org.apache.ctakes.relationextractor.data.Stats | ||
|---|---|---|
public static final boolean |
readOnlySharpRelations |
true |
| org.apache.ctakes.relationextractor.eval.PrintRelationStatistics | ||
|---|---|---|
public static final java.lang.String |
GOLD_VIEW_NAME |
"GoldView" |
| org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation | ||
|---|---|---|
public static final java.lang.String |
GOLD_VIEW_NAME |
"GoldView" |
| org.apache.ctakes.relationextractor.eval.RelationExtractorEvaluation.RemoveOtherRelations | ||
|---|---|---|
public static final java.lang.String |
PARAM_RELATION_CATEGORY |
"RelationCategory" |
| org.apache.ctakes.relationextractor.eval.XMIReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_FILES |
"files" |
| org.apache.ctakes.relationextractor.pipelines.RelationExtractorConsumer | ||
|---|---|---|
public final boolean |
displayContext |
false |
public final boolean |
displayEntities |
false |
| org.apache.ctakes.relationextractor.pipelines.TreeFeatureConsumer | ||
|---|---|---|
protected final boolean |
classifyBothDirections |
false |
public static final java.lang.String |
PARAM_CLASSIFY_BOTH_DIRECTIONS |
"ClassifyBothDirections" |
public static final java.lang.String |
PARAM_OUTFILE |
"outputFilename" |
| org.apache.ctakes.sideeffect.ae.PSESentenceAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_IGNORE_SECTIONS |
"SectionsToIgnore" |
| org.apache.ctakes.sideeffect.cc.SideEffectCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_DELIMITER |
"Delimiter" |
public static final java.lang.String |
PARAM_OUTPUT_FILE |
"OutputFile" |
| org.apache.ctakes.sideeffect.cc.SideEffectSentenceCasConsumer | ||
|---|---|---|
public static final java.lang.String |
PARAM_DELIMITER |
"Delimiter" |
public static final java.lang.String |
PARAM_OUTPUT_FILE |
"OutputFile" |
| org.apache.ctakes.smokingstatus.Const | ||
|---|---|---|
public static final java.lang.String |
CLASS_CURR_SMOKER |
"CURRENT_SMOKER" |
public static final int |
CLASS_CURR_SMOKER_INT |
1 |
public static final java.lang.String |
CLASS_KNOWN |
"KNOWN" |
public static final java.lang.String |
CLASS_NON_SMOKER |
"NON_SMOKER" |
public static final java.lang.String |
CLASS_PAST_SMOKER |
"PAST_SMOKER" |
public static final int |
CLASS_PAST_SMOKER_INT |
2 |
public static final java.lang.String |
CLASS_SMOKER |
"SMOKER" |
public static final int |
CLASS_SMOKER_INT |
3 |
public static final java.lang.String |
CLASS_UNKNOWN |
"UNKNOWN" |
| org.apache.ctakes.smokingstatus.ae.ClassifiableEntries | ||
|---|---|---|
public static final java.lang.String |
PARAM_ALLOWED_CLASSES |
"AllowedClassifications" |
public static final java.lang.String |
PARAM_IGNORE_SECTIONS |
"SectionsToIgnore" |
public static final java.lang.String |
PARAM_PARSE_SECTIONS |
"ParseSections" |
public static final java.lang.String |
PARAM_SMOKING_STATUS_DESC_STEP1KEY |
"UimaDescriptorStep1Key" |
public static final java.lang.String |
PARAM_SMOKING_STATUS_DESC_STEP2KEY |
"UimaDescriptorStep2Key" |
public static final java.lang.String |
PARAM_TRUTH_FILE |
"TruthFile" |
public static final java.lang.String |
PARAM_TRUTH_FILE_DELIMITER |
"TruthFileDelimiter" |
| org.apache.ctakes.smokingstatus.ae.SentenceAdjuster | ||
|---|---|---|
public static final java.lang.String |
PARAM_IGNORE_WORDS |
"WordsToIgnore" |
public static final java.lang.String |
PARAM_WORDS_IN_PATTERN |
"WordsInPattern" |
| org.apache.ctakes.smokingstatus.cc.RecordResolutionCasConsumer | ||
|---|---|---|
public static final java.lang.String |
CDA_PROCESSING |
"ProcessingCDADocument" |
public static final java.lang.String |
FINAL_CLASS_FILE |
"FinalClassificationOutputFile" |
public static final java.lang.String |
PARAM_DELIMITER |
"Delimiter" |
public static final java.lang.String |
PARAM_OUTPUT_FILE |
"OutputFile" |
public static final java.lang.String |
PATIENT_LEVEL_PROCESSING |
"RunPatientLevelClassification" |
| org.apache.ctakes.temporal.ae.EventAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_FEATURE_SELECTION_THRESHOLD |
"WhetherToDoFeatureSelection" |
public static final java.lang.String |
PARAM_FEATURE_SELECTION_URI |
"FeatureSelectionURI" |
public static final java.lang.String |
PARAM_PROBABILITY_OF_KEEPING_A_NEGATIVE_EXAMPLE |
"ProbabilityOfKeepingANegativeExample" |
public static final java.lang.String |
PARAM_SMOTE_NUM_NEIGHBORS |
"NumOfNeighborForSMOTE" |
| org.apache.ctakes.temporal.ae.THYMEKnowtatorXMLReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_KNOWTATOR_XML_DIRECTORY |
"knowtatorXMLDirectory" |
| org.apache.ctakes.temporal.eval.Evaluation_ImplBase<STATISTICS_TYPE> | ||
|---|---|---|
public static final java.lang.String |
GOLD_VIEW_NAME |
"GoldView" |
| org.apache.ctakes.temporal.eval.Evaluation_ImplBase.CopyFromGold | ||
|---|---|---|
public static final java.lang.String |
PARAM_ANNOTATION_CLASSES |
"AnnotationClasses" |
| org.apache.ctakes.temporal.eval.Evaluation_ImplBase.XMIReader | ||
|---|---|---|
public static final java.lang.String |
PARAM_XMI_DIRECTORY |
"XMIDirectory" |
| org.apache.ctakes.temporal.eval.Evaluation_ImplBase.XMIWriter | ||
|---|---|---|
public static final java.lang.String |
PARAM_XMI_DIRECTORY |
"XMIDirectory" |
| org.apache.ctakes.temporal.eval.EvaluationOfTemporalRelations.RemoveCrossSentenceRelations | ||
|---|---|---|
public static final java.lang.String |
PARAM_RELATION_VIEW |
"RelationView" |
| org.apache.ctakes.typesystem.type.constants.CONST | ||
|---|---|---|
public static final java.lang.String |
ATTR_BODYLATERALITY_DISTAL |
"distal" |
public static final java.lang.String |
ATTR_BODYLATERALITY_DORSAL |
"dorsal" |
public static final java.lang.String |
ATTR_BODYLATERALITY_INFERIOR |
"inferior" |
public static final java.lang.String |
ATTR_BODYLATERALITY_LATERAL |
"lateral" |
public static final java.lang.String |
ATTR_BODYLATERALITY_MEDIAL |
"medial" |
public static final java.lang.String |
ATTR_BODYLATERALITY_PROXIMAL |
"proximal" |
public static final java.lang.String |
ATTR_BODYLATERALITY_SUPERIOR |
"superior" |
public static final java.lang.String |
ATTR_BODYLATERALITY_UNMARKED |
"unmarked" |
public static final java.lang.String |
ATTR_BODYLATERALITY_VENTRAL |
"ventral" |
public static final java.lang.String |
ATTR_BODYSIDE_BILATERAL |
"bilateral" |
public static final java.lang.String |
ATTR_BODYSIDE_LEFT |
"left" |
public static final java.lang.String |
ATTR_BODYSIDE_RIGHT |
"right" |
public static final java.lang.String |
ATTR_BODYSIDE_UNMARKED |
"unmarked" |
public static final java.lang.String |
ATTR_HISTORYOF_INDICATOR_ABSENT |
"historyOf_absent" |
public static final java.lang.String |
ATTR_HISTORYOF_INDICATOR_PRESENT |
"historyOf_present" |
public static final java.lang.String |
ATTR_LAB_ABNORMAL_TRUE |
"abnormal" |
public static final java.lang.String |
ATTR_LAB_ABNORMAL_VERYTRUE |
"very_abnormal" |
public static final java.lang.String |
ATTR_LAB_DELTAFLAG_CHANGEDOWN |
"change_down" |
public static final java.lang.String |
ATTR_LAB_DELTAFLAG_CHANGEUP |
"change_up" |
public static final java.lang.String |
ATTR_LAB_DELTAFLAG_NOCHANGE |
"no_change" |
public static final boolean |
ATTR_LAB_ESTIMATED_FLAG_FALSE |
false |
public static final boolean |
ATTR_LAB_ESTIMATED_FLAG_TRUE |
true |
public static final java.lang.String |
ATTR_LAB_ORDINAL_1ORMORE |
"1+" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_2ORMORE |
"2+" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_3ORMORE |
"3+" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_4ORMORE |
"4+" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_ANTICOMPLEMENTARYPRESENT |
"anti_complementary_substance_present" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_CYTOTOXICPRESENT |
"cytotoxic_substance_present" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_DETECTED |
"detected" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_INTERMEDIATE |
"intermediate" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_INTERMEDIATERESISTANCE |
"intermediate_resistance" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_MODERATELYSUSCEPTIBLE |
"moderately_susceptible" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_NEGATIVE |
"negative" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_NO_OR_NA_RANGE |
"no_range_or_normal_range_n/a" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_NORMAL |
"normal" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_NOTDETECTED |
"not_detected" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_POSITIVE |
"positive" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_QUALITYCONTROLFAIL |
"quality_control_failure" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_REACTIVE |
"reactive" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_RESISTANT |
"resistant" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_SMALL |
"small" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_SUSCEPTIBLE |
"susceptible" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_TRACE |
"trace" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_VERYSUSCEPTIBLE |
"very_susceptible" |
public static final java.lang.String |
ATTR_LAB_ORDINAL_WEAKLY_REACTIVE |
"weakly_reactive" |
public static final java.lang.String |
ATTR_MEDICATION_ALLERGY_INDICATOR_ABSENT |
"allergy_absent" |
public static final java.lang.String |
ATTR_MEDICATION_ALLERGY_INDICATOR_PRESENT |
"allergy_present" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_1 |
"1" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_2 |
"2" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_3 |
"3" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_4 |
"4" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_5 |
"5" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_OTHER |
"other" |
public static final java.lang.String |
ATTR_MEDICATION_DOSAGE_UNDETERMINED |
"undetermined" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_AEROSOL |
"aerosol" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_CAPSULE |
"capsule" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_CREAM |
"cream" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_ELIXIR |
"elixir" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_EMULSION |
"emulsion" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_ENEMA |
"enema" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_GEL |
"gel" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_IMPLANT |
"implant" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_INHALANT |
"inhalant" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_INJECTION |
"injection" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_LIQUID |
"liquid" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_LOTION |
"lotion" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_LOZENGE |
"lozenge" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_OINTMENT |
"ointment" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_OTHER |
"other" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_PATCH |
"patch" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_PELLET |
"pellet" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_PILL |
"pill" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_POWDER |
"powder" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SHAMPOO |
"shampoo" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SOAP |
"soap" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SOLUTION |
"solution" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SPRAY |
"spray" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SUPPOSITORY |
"suppository" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_SYRUP |
"syrup" |
public static final java.lang.String |
ATTR_MEDICATION_FORM_TABLET |
"tablet" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_ENTERAL_GASTRIC |
"gastric" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_ENTERAL_ORAL |
"oral" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_ENTERAL_RECTAL |
"rectal" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_OTHER |
"other" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRAARTERIAL |
"intra-arterial" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRACARDIAC |
"intracardiac" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRAMUSCULAR |
"intramuscular" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRAPERIOTONEAL |
"intraperiotoneal" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRATHECAL |
"intrathecal" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_INTRAVENOUS |
"intravenous" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_SUBCUTANEOUS |
"subcutaneous" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_TRANSDERMAL |
"transdermal" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_PARENTERAL_TRANSMUCOSAL |
"transmucosal" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_TOPICAL |
"topical" |
public static final java.lang.String |
ATTR_MEDICATION_ROUTE_UNDETERMINED |
"undetermined" |
public static final java.lang.String |
ATTR_MEDICATION_STATUSCHANGE_DECREASE |
"decrease" |
public static final java.lang.String |
ATTR_MEDICATION_STATUSCHANGE_INCREASE |
"increase" |
public static final java.lang.String |
ATTR_MEDICATION_STATUSCHANGE_NOCHANGE |
"noChange" |
public static final java.lang.String |
ATTR_MEDICATION_STATUSCHANGE_START |
"start" |
public static final java.lang.String |
ATTR_MEDICATION_STATUSCHANGE_STOP |
"stop" |
public static final java.lang.String |
ATTR_SEVERITY_MODERATE |
"moderate" |
public static final java.lang.String |
ATTR_SEVERITY_SEVERE |
"severe" |
public static final java.lang.String |
ATTR_SEVERITY_SLIGHT |
"slight" |
public static final java.lang.String |
ATTR_SEVERITY_UNMARKED |
"unmarked" |
public static final java.lang.String |
ATTR_SUBJECT_DONOR_FAMILY_MEMBER |
"donor_family_member" |
public static final java.lang.String |
ATTR_SUBJECT_DONOR_OTHER |
"donor_other" |
public static final java.lang.String |
ATTR_SUBJECT_FAMILY_MEMBER |
"family_member" |
public static final java.lang.String |
ATTR_SUBJECT_OTHER |
"other" |
public static final java.lang.String |
ATTR_SUBJECT_PATIENT |
"patient" |
public static final java.lang.String |
MED_STATUS_CHANGE_DECREASE |
"decrease" |
public static final java.lang.String |
MED_STATUS_CHANGE_DECREASEFROM |
"decreasefrom" |
public static final java.lang.String |
MED_STATUS_CHANGE_INCREASE |
"increase" |
public static final java.lang.String |
MED_STATUS_CHANGE_INCREASEFROM |
"increasefrom" |
public static final java.lang.String |
MED_STATUS_CHANGE_MAX |
"maximum" |
public static final java.lang.String |
MED_STATUS_CHANGE_NOCHANGE |
"noChange" |
public static final java.lang.String |
MED_STATUS_CHANGE_OTHER |
"change" |
public static final java.lang.String |
MED_STATUS_CHANGE_START |
"start" |
public static final java.lang.String |
MED_STATUS_CHANGE_STOP |
"stop" |
public static final java.lang.String |
MED_STATUS_CHANGE_SUM |
"add" |
public static final int |
MODIFIER_TYPE_ID_COURSE_CLASS |
1 |
public static final int |
MODIFIER_TYPE_ID_LAB_INTERPRETATION_INDICATOR |
3 |
public static final int |
MODIFIER_TYPE_ID_SEVERITY_CLASS |
2 |
public static final int |
MODIFIER_TYPE_ID_UNKNOWN |
0 |
public static final int |
NE_CERTAINTY_NEGATED |
-1 |
public static final int |
NE_CERTAINTY_POSITIVE |
1 |
public static final boolean |
NE_CONDITIONAL_FALSE |
false |
public static final boolean |
NE_CONDITIONAL_TRUE |
true |
public static final int |
NE_DIAG_STATUS_CONFIRMED |
0 |
public static final int |
NE_DIAG_STATUS_FAM_HISTORY_OF |
2 |
public static final int |
NE_DIAG_STATUS_HISTORY_OF |
1 |
public static final int |
NE_DIAG_STATUS_PROBABLE |
3 |
public static final int |
NE_DISCOVERY_TECH_DICT_LOOKUP |
1 |
public static final int |
NE_DISCOVERY_TECH_GOLD_ANNOTATION |
2 |
public static final boolean |
NE_GENERIC_FALSE |
false |
public static final boolean |
NE_GENERIC_TRUE |
true |
public static final int |
NE_HISTORY_OF_ABSENT |
0 |
public static final int |
NE_HISTORY_OF_PRESENT |
1 |
public static final int |
NE_POLARITY_NEGATION_ABSENT |
1 |
public static final int |
NE_POLARITY_NEGATION_PRESENT |
-1 |
public static final int |
NE_TYPE_ID_ANATOMICAL_SITE |
6 |
public static final int |
NE_TYPE_ID_CLINICAL_ATTRIBUTE |
7 |
public static final int |
NE_TYPE_ID_DEVICE |
8 |
public static final int |
NE_TYPE_ID_DISORDER |
2 |
public static final int |
NE_TYPE_ID_DRUG |
1 |
public static final int |
NE_TYPE_ID_FINDING |
3 |
public static final int |
NE_TYPE_ID_LAB |
9 |
public static final int |
NE_TYPE_ID_PHENOMENA |
10 |
public static final int |
NE_TYPE_ID_PROCEDURE |
5 |
public static final int |
NE_TYPE_ID_UNKNOWN |
0 |
public static final int |
NE_UNCERTAINTY_ABSENT |
0 |
public static final int |
NE_UNCERTAINTY_PRESENT |
1 |
public static final int |
REL_DISCOVERY_TECH_GOLD_ANNOTATION |
1 |
| org.mitre.* |
|---|
| org.mitre.medfacts.uima.ZoneAnnotator | ||
|---|---|---|
public static final java.lang.String |
PARAM_SECTION_REGEX_FILE_URI |
"SectionRegex" |
|
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