org.apache.ctakes.sideeffect.ae
Class SideEffectAnnotator

java.lang.Object
  org.apache.uima.analysis_component.AnalysisComponent_ImplBase
      org.apache.uima.analysis_component.Annotator_ImplBase
          org.apache.uima.analysis_component.JCasAnnotator_ImplBase
              org.apache.ctakes.sideeffect.ae.SideEffectAnnotator

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

public class SideEffectAnnotator
extends org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Rule-based side effect extraction. Identify side effects and causative drugs and add them to SideEffectAnnotation

Author:

Mayo Clinic

Constructor Summary

SideEffectAnnotator()

Method Summary

void	initialize(org.apache.uima.UimaContext annotCtx)
void	process(org.apache.uima.jcas.JCas jcas)

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SideEffectAnnotator

public SideEffectAnnotator()

Method Detail

initialize

public void initialize(org.apache.uima.UimaContext annotCtx)
                throws org.apache.uima.resource.ResourceInitializationException

Specified by:

initialize in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

initialize in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

Throws:

org.apache.uima.resource.ResourceInitializationException

process

public void process(org.apache.uima.jcas.JCas jcas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException