A B C D E F G H I L M N O P Q R S T W

A

AEROSOL - Static variable in class org.apache.ctakes.drugner.elements.FormElement

al - Variable in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

ASNEEDED - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

AssociatedCodeElement - Class in org.apache.ctakes.drugner.elements

AssociatedCodeElement() - Constructor for class org.apache.ctakes.drugner.elements.AssociatedCodeElement

AssociatedCodeElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.AssociatedCodeElement

associatedCodePrimary - Variable in class org.apache.ctakes.drugner.DrugMention

associatedCodeSecondary - Variable in class org.apache.ctakes.drugner.DrugMention

terminology unique identifier (e.g.

AssociatedCodeToken - Class in org.apache.ctakes.drugner.fsm.output.elements

AssociatedCodeToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.AssociatedCodeToken

AssociatedPrimaryCodeElement - Class in org.apache.ctakes.drugner.elements

AssociatedPrimaryCodeElement() - Constructor for class org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement

AssociatedPrimaryCodeElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement

AssociatedSecondaryCodeElement - Class in org.apache.ctakes.drugner.elements

AssociatedSecondaryCodeElement() - Constructor for class org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement

AssociatedSecondaryCodeElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement

B

BaseTokenImpl - Class in org.apache.ctakes.drugner.fsm.output.elements

BaseTokenImpl(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.BaseTokenImpl

BOUNDARY_ANN_TYPE - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

Annotation type that defines the boundary within which the dictionary hits should be present.

C

CAPSULE - Static variable in class org.apache.ctakes.drugner.elements.FormElement

changeStatus - Variable in class org.apache.ctakes.drugner.DrugMention

aka change.

ChunkAnnotation - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013 XML source: C:/build-Apache-cTAKES/ctakes-3.1.1/rc2/checkout/ctakes/target/checkout/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml

ChunkAnnotation() - Constructor for class org.apache.ctakes.drugner.type.ChunkAnnotation

Never called.

ChunkAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.ChunkAnnotation

Internal - constructor used by generator

ChunkAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.ChunkAnnotation

ChunkAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.ChunkAnnotation

ChunkAnnotation_Type - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013

ChunkAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

initialize variables to correspond with Cas Type and Features

confidence - Variable in class org.apache.ctakes.drugner.DrugMention

ConfidenceScoreElement - Class in org.apache.ctakes.drugner.elements

ConfidenceScoreElement() - Constructor for class org.apache.ctakes.drugner.elements.ConfidenceScoreElement

ConfidenceScoreElement(double, int, int) - Constructor for class org.apache.ctakes.drugner.elements.ConfidenceScoreElement

ConfidenceScoreToken - Class in org.apache.ctakes.drugner.fsm.output.elements

ConfidenceScoreToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.ConfidenceScoreToken

CONFIRMED_STATUS - Static variable in class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

ConsumeNamedEntityRecordModel - Class in org.apache.ctakes.drugner.cc

UIMA annotator that preps the CAS for extraction into DB2.

ConsumeNamedEntityRecordModel() - Constructor for class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

ContainsSetTextValueCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Finds numeric values w/in tokens containing mixed text (integers contained in a string).

ContainsSetTextValueCondition(Set, boolean) - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.ContainsSetTextValueCondition

Constructor

convertFromTextToNum(String) - Method in class org.apache.ctakes.drugner.DrugMention

convertToChangeStatus(String) - Method in class org.apache.ctakes.drugner.DrugMention

CopyDrugAnnotator - Class in org.apache.ctakes.drugner.ae

Utility annotator that copy's data from an existing JCas object into a new JCas object.

CopyDrugAnnotator() - Constructor for class org.apache.ctakes.drugner.ae.CopyDrugAnnotator

CREAM - Static variable in class org.apache.ctakes.drugner.elements.FormElement

D

DAILY - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

DecimalStrengthAnnotation - Class in org.apache.ctakes.drugner.type

The decimal portion of dosages stength determination for the Drug NER profile.

DecimalStrengthAnnotation() - Constructor for class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

Never called.

DecimalStrengthAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

Internal - constructor used by generator

DecimalStrengthAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

DecimalStrengthAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

DecimalStrengthAnnotation_Type - Class in org.apache.ctakes.drugner.type

The decimal portion of dosages stength determination for the Drug NER profile.

DecimalStrengthAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type

initialize variables to correspond with Cas Type and Features

DecimalStrengthFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect decimal fractions in the given input of tokens.

DecimalStrengthFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.DecimalStrengthFSM

Constructor

DecimalStrengthStatusCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a FractionToken.

DecimalStrengthStatusCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.DecimalStrengthStatusCondition

DecimalStrengthToken - Class in org.apache.ctakes.drugner.fsm.output.util

DecimalStrengthToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.DecimalStrengthToken

DECREASE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

DECREASE_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

DECREASEFROM - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

DISTANCE - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

DISTANCE_ANN_TYPE - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

Annotation type that is used to count the distance.

dosage - Variable in class org.apache.ctakes.drugner.DrugMention

e.g.

DosageCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a DosageToken.

DosageCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.DosageCondition

DosageElement - Class in org.apache.ctakes.drugner.elements

DosageElement() - Constructor for class org.apache.ctakes.drugner.elements.DosageElement

DosageElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.DosageElement

DosagesAnnotation - Class in org.apache.ctakes.drugner.type

The dosage determination for the Drug NER profile.

DosagesAnnotation() - Constructor for class org.apache.ctakes.drugner.type.DosagesAnnotation

Never called.

DosagesAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.DosagesAnnotation

Internal - constructor used by generator

DosagesAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.DosagesAnnotation

DosagesAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.DosagesAnnotation

DosagesAnnotation_Type - Class in org.apache.ctakes.drugner.type

The dosage determination for the Drug NER profile.

DosagesAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.DosagesAnnotation_Type

initialize variables to correspond with Cas Type and Features

DosagesFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect dosages in the given input of tokens.

DosagesFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.DosagesFSM

Constructor

DosageToken - Class in org.apache.ctakes.drugner.fsm.output.elements

DosageToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.DosageToken

DrugChangeStatusAnnotation - Class in org.apache.ctakes.drugner.type

The change status of dosages determination for the Drug NER profile.

DrugChangeStatusAnnotation() - Constructor for class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

Never called.

DrugChangeStatusAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

Internal - constructor used by generator

DrugChangeStatusAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

DrugChangeStatusAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

DrugChangeStatusAnnotation_Type - Class in org.apache.ctakes.drugner.type

The change status of dosages determination for the Drug NER profile.

DrugChangeStatusAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

initialize variables to correspond with Cas Type and Features

DrugChangeStatusCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a DrugChangeStatusToken.

DrugChangeStatusCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.DrugChangeStatusCondition

DrugChangeStatusElement - Class in org.apache.ctakes.drugner.elements

DrugChangeStatusElement() - Constructor for class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

DrugChangeStatusElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

DrugChangeStatusFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect change status data in the given input of tokens.

DrugChangeStatusFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.DrugChangeStatusFSM

Constructor

DrugChangeStatusToken - Class in org.apache.ctakes.drugner.fsm.output.elements

DrugChangeStatusToken(int, int, String) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

DrugLookupWindowAnnotation - Class in org.apache.ctakes.typesystem.type.textspan

Similar to LookupWindowAnnotation however, these annotations are restricted to the segments/sections specified in the parameter - sectionOverrideSet - in DrugCNP2LookupWindow Updated by JCasGen Thu Nov 28 10:33:02 CST 2013 XML source: C:/build-Apache-cTAKES/ctakes-3.1.1/rc2/checkout/ctakes/target/checkout/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml

DrugLookupWindowAnnotation() - Constructor for class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

Never called.

DrugLookupWindowAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

Internal - constructor used by generator

DrugLookupWindowAnnotation(JCas) - Constructor for class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

DrugLookupWindowAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

DrugLookupWindowAnnotation_Type - Class in org.apache.ctakes.typesystem.type.textspan

Similar to LookupWindowAnnotation however, these annotations are restricted to the segments/sections specified in the parameter - sectionOverrideSet - in DrugCNP2LookupWindow Updated by JCasGen Thu Nov 28 10:33:02 CST 2013

DrugLookupWindowAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type

initialize variables to correspond with Cas Type and Features

DrugMention - Class in org.apache.ctakes.drugner

Contains information from a single document - is not the result of data mining.

DrugMention(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.DrugMention

DrugMentionAnnotation - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013 XML source: C:/build-Apache-cTAKES/ctakes-3.1.1/rc2/checkout/ctakes/target/checkout/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml

DrugMentionAnnotation() - Constructor for class org.apache.ctakes.drugner.type.DrugMentionAnnotation

Never called.

DrugMentionAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.DrugMentionAnnotation

Internal - constructor used by generator

DrugMentionAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.DrugMentionAnnotation

DrugMentionAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.DrugMentionAnnotation

DrugMentionAnnotation_Type - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013

DrugMentionAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

initialize variables to correspond with Cas Type and Features

DrugMentionAnnotator - Class in org.apache.ctakes.drugner.ae

Finds tokens based on context.

DrugMentionAnnotator() - Constructor for class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

drugMentionText - Variable in class org.apache.ctakes.drugner.DrugMention

The word(s) in the note that indicate the drug.

DrugModel - Interface in org.apache.ctakes.drugner

duration - Variable in class org.apache.ctakes.drugner.DrugMention

e.g.

DurationAnnotation - Class in org.apache.ctakes.drugner.type

The duration determination for the Drug NER profile.

DurationAnnotation() - Constructor for class org.apache.ctakes.drugner.type.DurationAnnotation

Never called.

DurationAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.DurationAnnotation

Internal - constructor used by generator

DurationAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.DurationAnnotation

DurationAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.DurationAnnotation

DurationAnnotation_Type - Class in org.apache.ctakes.drugner.type

The duration determination for the Drug NER profile.

DurationAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.DurationAnnotation_Type

initialize variables to correspond with Cas Type and Features

DurationElement - Class in org.apache.ctakes.drugner.elements

DurationElement() - Constructor for class org.apache.ctakes.drugner.elements.DurationElement

DurationElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.DurationElement

DurationFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect duration data in the given input of tokens.

DurationFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.DurationFSM

Constructor

DurationToken - Class in org.apache.ctakes.drugner.fsm.output.elements

DurationToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.DurationToken

E

ELIXIR - Static variable in class org.apache.ctakes.drugner.elements.FormElement

EMULSION - Static variable in class org.apache.ctakes.drugner.elements.FormElement

endDate - Variable in class org.apache.ctakes.drugner.DrugMention

ENEMA - Static variable in class org.apache.ctakes.drugner.elements.FormElement

enter(Object) - Method in class org.apache.ctakes.drugner.fsm.states.util.IndentStartState

EVERYOTHERDAY - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DecimalStrengthFSM

Executes the finite state machines.

execute(List, Set, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DosagesFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DosagesFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DrugChangeStatusFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DurationFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.DurationFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FormFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FormFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FractionStrengthFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyFSM

Executes the finite state machines.

execute(List, Set, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyUnitFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyUnitFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.RangeStrengthFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.RangeStrengthFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.RouteFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.RouteFSM

Executes the finite state machines.

execute(List, Set, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.StrengthFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.StrengthFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.StrengthFSM

Executes the finite state machines.

execute(List, Set, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.StrengthUnitFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.elements.StrengthUnitFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.HyphenatedDrugFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.NegIndicatorFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.NonIndicatorFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.StatusIndicatorFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.SubSectionIndicatorFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.util.SuffixFrequencyFSM

Executes the finite state machines.

execute(List) - Method in class org.apache.ctakes.drugner.fsm.machines.util.SuffixFrequencyFSM

Executes the finite state machines.

execute(List, Set) - Method in class org.apache.ctakes.drugner.fsm.machines.util.SuffixStrengthFSM

Executes the finite state machines.

exit() - Method in class org.apache.ctakes.drugner.fsm.states.util.IndentStartState

F

FAMILY_HISTORY_STATUS - Static variable in class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

featOkTst - Static variable in class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.DosagesAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.DurationAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.FormAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.FrequencyAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.RouteAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.StrengthAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type

featOkTst - Static variable in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type

findMaxValue - Variable in class org.apache.ctakes.drugner.DrugMention

form - Variable in class org.apache.ctakes.drugner.DrugMention

Span the drug form, if available.

FormAnnotation - Class in org.apache.ctakes.drugner.type

The value represents the form portion of the drug mention.

FormAnnotation() - Constructor for class org.apache.ctakes.drugner.type.FormAnnotation

Never called.

FormAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.FormAnnotation

Internal - constructor used by generator

FormAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.FormAnnotation

FormAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.FormAnnotation

FormAnnotation_Type - Class in org.apache.ctakes.drugner.type

The value represents the form portion of the drug mention.

FormAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.FormAnnotation_Type

initialize variables to correspond with Cas Type and Features

FormCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a FormToken.

FormCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.FormCondition

FormElement - Class in org.apache.ctakes.drugner.elements

FormElement() - Constructor for class org.apache.ctakes.drugner.elements.FormElement

FormElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.FormElement

FormFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect form tokens in the given input of tokens.

FormFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.FormFSM

Constructor

FormToken - Class in org.apache.ctakes.drugner.fsm.output.elements

FormToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.FormToken

FractionCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a FractionToken.

FractionCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.FractionCondition

FractionStrengthAnnotation - Class in org.apache.ctakes.drugner.type

The fraction portion of dosages strength determination for the Drug NER profile.

FractionStrengthAnnotation() - Constructor for class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

Never called.

FractionStrengthAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

Internal - constructor used by generator

FractionStrengthAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

FractionStrengthAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

FractionStrengthAnnotation_Type - Class in org.apache.ctakes.drugner.type

The fraction portion of dosages strength determination for the Drug NER profile.

FractionStrengthAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type

initialize variables to correspond with Cas Type and Features

FractionStrengthCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a FractionStrengthToken.

FractionStrengthCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.FractionStrengthCondition

FractionStrengthFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect fraction strength tokens in the given input of tokens.

FractionStrengthFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.FractionStrengthFSM

Constructor

FractionStrengthToken - Class in org.apache.ctakes.drugner.fsm.output.util

FractionStrengthToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.FractionStrengthToken

FractionToken - Class in org.apache.ctakes.drugner.fsm.output.util

FractionToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.FractionToken

frequency - Variable in class org.apache.ctakes.drugner.DrugMention

e.g.

FrequencyAnnotation - Class in org.apache.ctakes.drugner.type

The frequency determination for the Drug NER profile.

FrequencyAnnotation() - Constructor for class org.apache.ctakes.drugner.type.FrequencyAnnotation

Never called.

FrequencyAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.FrequencyAnnotation

Internal - constructor used by generator

FrequencyAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.FrequencyAnnotation

FrequencyAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.FrequencyAnnotation

FrequencyAnnotation_Type - Class in org.apache.ctakes.drugner.type

The frequency determination for the Drug NER profile.

FrequencyAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.FrequencyAnnotation_Type

initialize variables to correspond with Cas Type and Features

FrequencyElement - Class in org.apache.ctakes.drugner.elements

FrequencyElement() - Constructor for class org.apache.ctakes.drugner.elements.FrequencyElement

FrequencyElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.FrequencyElement

FrequencyFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect frequency data in the given input of tokens.

FrequencyFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyFSM

Constructor

FrequencyToken - Class in org.apache.ctakes.drugner.fsm.output.elements

FrequencyToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.FrequencyToken

frequencyUnit - Variable in class org.apache.ctakes.drugner.DrugMention

e.g.

FrequencyUnitAnnotation - Class in org.apache.ctakes.drugner.type

The value represents the unit portion of the drug frequency.

FrequencyUnitAnnotation() - Constructor for class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

Never called.

FrequencyUnitAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

Internal - constructor used by generator

FrequencyUnitAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

FrequencyUnitAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

FrequencyUnitAnnotation_Type - Class in org.apache.ctakes.drugner.type

The value represents the unit portion of the drug frequency.

FrequencyUnitAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

initialize variables to correspond with Cas Type and Features

FrequencyUnitCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a FrequencyUnitToken.

FrequencyUnitCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.FrequencyUnitCondition

FrequencyUnitElement - Class in org.apache.ctakes.drugner.elements

FrequencyUnitElement() - Constructor for class org.apache.ctakes.drugner.elements.FrequencyUnitElement

FrequencyUnitElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.FrequencyUnitElement

FrequencyUnitFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect frequency unit data in the given input of tokens.

FrequencyUnitFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.FrequencyUnitFSM

Constructor

FrequencyUnitToken - Class in org.apache.ctakes.drugner.fsm.output.elements

FrequencyUnitToken(int, int, double) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

G

GASTRIC - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

GASTRIC - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

GEL - Static variable in class org.apache.ctakes.drugner.elements.FormElement

getAnnotationIterator(JCas) - Method in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedCodeElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.ConfidenceScoreElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.DosageElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.DurationElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.FormElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.FrequencyElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.RouteElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.StartDateElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.StrengthElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.StrengthUnitElement

getBeginOffset() - Method in class org.apache.ctakes.drugner.elements.TextMentionElement

getChangeStatus() - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

getter for changeStatus - gets Indicates the drug change status of 'stop', 'start', 'increase', 'decrease', or 'noChange'.

getChangeStatus(int) - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

getChangeStatusBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getChangeStatusBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for changeStatusBegin - gets

getChangeStatusBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getChangeStatusEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getChangeStatusEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for changeStatusEnd - gets

getChangeStatusEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getConfidence() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for confidence - gets The confidence of the annotation.

getConfidence(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getConfidenceScoreElement() - Method in class org.apache.ctakes.drugner.DrugMention

getConfidenceScoreElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getConfidenceScoreElement() - Method in class org.apache.ctakes.drugner.elements.ConfidenceScoreElement

getContextHit(List, int) - Method in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

getCuiCode() - Method in class org.apache.ctakes.drugner.elements.AssociatedCodeElement

getCuiCode() - Method in class org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement

getCuiCode() - Method in class org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement

getDate() - Method in class org.apache.ctakes.drugner.elements.StartDateElement

getDosage() - Method in class org.apache.ctakes.drugner.elements.DosageElement

getDosage() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for dosage - gets Dosage refers to how many of each drug the patient is taking.

getDosage(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDosageBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getDosageBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for dosageBegin - gets

getDosageBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDosageElement() - Method in class org.apache.ctakes.drugner.DrugMention

getDosageElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getDosageEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getDosageEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for dosageEnd - gets

getDosageEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDrugChangeStatus() - Method in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

getDrugChangeStatus() - Method in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

getDrugChangeStatus() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for drugChangeStatus - gets Status refers to the whether the medication is currently being taken or not.

getDrugChangeStatus(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDrugChangeStatusElement() - Method in class org.apache.ctakes.drugner.DrugMention

getDrugChangeStatusElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getDuratationBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getDuratationEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getDuration() - Method in class org.apache.ctakes.drugner.elements.DurationElement

getDuration() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for duration - gets Duration refers to for how long the patient is expected to take the drug.

getDuration(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDurationBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for durationBegin - gets

getDurationBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getDurationElement() - Method in class org.apache.ctakes.drugner.DrugMention

getDurationElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getDurationEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for durationEnd - gets

getDurationEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getEndDateElement() - Method in class org.apache.ctakes.drugner.DrugMention

getEndDateElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedCodeElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedPrimaryCodeElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.AssociatedSecondaryCodeElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.ConfidenceScoreElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.DosageElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.DurationElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.FormElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.FrequencyElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.RouteElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.StartDateElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.StrengthElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.StrengthUnitElement

getEndOffset() - Method in class org.apache.ctakes.drugner.elements.TextMentionElement

getEndOffset() - Method in class org.apache.ctakes.drugner.fsm.output.elements.BaseTokenImpl

getForm() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for form - gets Form refers to the physical appearance of the drug.

getForm(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFormBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getFormBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for formBegin - gets

getFormBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFormElement() - Method in class org.apache.ctakes.drugner.DrugMention

getFormElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getFormEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getFormEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for formEnd - gets

getFormEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFormMention() - Method in class org.apache.ctakes.drugner.elements.FormElement

getFormMethod() - Method in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

getFrequency() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for frequency - gets Frequency refers to how often the patient needs to take the drug.

getFrequency(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFrequencyBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getFrequencyBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for frequencyBegin - gets

getFrequencyBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFrequencyElement() - Method in class org.apache.ctakes.drugner.DrugMention

getFrequencyElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getFrequencyEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getFrequencyEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for frequencyEnd - gets

getFrequencyEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFrequencyMention() - Method in class org.apache.ctakes.drugner.elements.FrequencyElement

getFrequencyUnit() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for frequencyUnit - gets

getFrequencyUnit(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFrequencyUnitElement() - Method in class org.apache.ctakes.drugner.DrugMention

getFrequencyUnitElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getFrequencyUnitMention() - Method in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

getFrequencyUnitQuantity() - Method in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.DosagesAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.DurationAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.FormAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.FrequencyAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.RouteAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.StrengthAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type

getFSGenerator() - Method in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type

getFUBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getFuBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for fuBegin - gets

getFuBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getFUENd() - Method in class org.apache.ctakes.drugner.DrugMention

getFuEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for fuEnd - gets

getFuEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getIntakeMethod() - Method in class org.apache.ctakes.drugner.type.RouteAnnotation

getter for intakeMethod - gets Means by which the drug was taken.

getIntakeMethod(int) - Method in class org.apache.ctakes.drugner.type.RouteAnnotation_Type

getParentSectionId() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for parentSectionId - gets The section in which the subsection was found.

getParentSectionId(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getPeriod() - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

getter for period - gets The periodic unit used, e.g day, month, hour, etc.

getPeriod(int) - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

getPrimaryAssociatedCodeElement() - Method in class org.apache.ctakes.drugner.DrugMention

getPrimaryAssociatedCodeElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getReason() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for reason - gets

getReason(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

indexed getter for reason - gets an indexed value -

getReason(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getReason(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getRoute() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for route - gets Medication route refers to the way that a drug is introduced into the body.

getRoute(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getRouteBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getRouteBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for routeBegin - gets

getRouteBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getRouteElement() - Method in class org.apache.ctakes.drugner.DrugMention

getRouteElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getRouteEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getRouteEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for routeEnd - gets

getRouteEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getRouteMention() - Method in class org.apache.ctakes.drugner.elements.RouteElement

getSecondaryAssociatedCodeElement() - Method in class org.apache.ctakes.drugner.DrugMention

getSecondaryAssociatedCodeElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getSentenceID() - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation

getter for sentenceID - gets

getSentenceID(int) - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

getStartDate() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for startDate - gets

getStartDate(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStartDateElement() - Method in class org.apache.ctakes.drugner.DrugMention

getStartDateElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getStartOffset() - Method in class org.apache.ctakes.drugner.fsm.output.elements.BaseTokenImpl

getStatus() - Method in class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

getStatus() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for status - gets

getStatus(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStatus() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for status - gets Status of 'possible', 'history of', or 'family history of'.

getStatus(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getStrength() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for strength - gets

getStrength(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStrengthBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getStrengthBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for strengthBegin - gets

getStrengthBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStrengthElement() - Method in class org.apache.ctakes.drugner.DrugMention

getStrengthElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getStrengthEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getStrengthEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for strengthEnd - gets

getStrengthEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStrengthMention() - Method in class org.apache.ctakes.drugner.elements.StrengthElement

getStrengthMention() - Method in class org.apache.ctakes.drugner.elements.StrengthUnitElement

getStrengthUnit() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for strengthUnit - gets

getStrengthUnit(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getStrengthUnitBegin() - Method in class org.apache.ctakes.drugner.DrugMention

getStrengthUnitElement() - Method in class org.apache.ctakes.drugner.DrugMention

getStrengthUnitElement() - Method in interface org.apache.ctakes.drugner.DrugModel

getStrengthUnitEnd() - Method in class org.apache.ctakes.drugner.DrugMention

getSuBegin() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for suBegin - gets

getSuBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getSubSectionBodyBegin() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for subSectionBodyBegin - gets Sub-section body begin offset.

getSubSectionBodyBegin(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getSubSectionBodyEnd() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for subSectionBodyEnd - gets Sub-section body end offset.

getSubSectionBodyEnd(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getSubSectionHeaderBegin() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for subSectionHeaderBegin - gets Begin offset of subSection header

getSubSectionHeaderBegin(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getSubSectionHeaderEnd() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getter for subSectionHeaderEnd - gets Ending offset of subsection header

getSubSectionHeaderEnd(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

getSuEnd() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getter for suEnd - gets

getSuEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

getTextMention() - Method in class org.apache.ctakes.drugner.elements.TextMentionElement

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.DosagesAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.DurationAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.FormAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.FrequencyAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.RouteAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.StrengthAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

getTypeIndexID() - Method in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

H

HISTORY_STATUS - Static variable in class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

HOURLY - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

HyphenatedDrugFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect hyphenated drug information adjoined to dosage data in the given input of tokens.

HyphenatedDrugFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.HyphenatedDrugFSM

Constructor

HyphenatedDrugToken - Class in org.apache.ctakes.drugner.fsm.output.util

HyphenatedDrugToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.HyphenatedDrugToken

I

iAnnotationType - Variable in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

IMPLANT - Static variable in class org.apache.ctakes.drugner.elements.FormElement

INCREASE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

INCREASE_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

INCREASEFROM - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

IndentStartState - Class in org.apache.ctakes.drugner.fsm.states.util

IndentStartState(String) - Constructor for class org.apache.ctakes.drugner.fsm.states.util.IndentStartState

indexOfRegex(String, Pattern) - Static method in class org.apache.ctakes.drugner.DrugMention

Scan a string for the first occurrence of some regex Pattern.

INHALANT - Static variable in class org.apache.ctakes.drugner.elements.FormElement

initialize(UimaContext) - Method in class org.apache.ctakes.drugner.ae.CopyDrugAnnotator

initialize(UimaContext) - Method in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

initialize(UimaContext) - Method in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

initialize() - Method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

INJECTION - Static variable in class org.apache.ctakes.drugner.elements.FormElement

INTRAARTERIAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRAARTERIAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

INTRACARDIAC - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRACARDIAC - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

INTRAMUSCULAR - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRAMUSCULAR - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

INTRAPERITONEAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRAPERITONEAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

INTRATHECAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRATHECAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

INTRAVENOUS - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

INTRAVENOUS - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

iv_logger - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

L

LIQUID - Static variable in class org.apache.ctakes.drugner.elements.FormElement

load(String) - Static method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

Loads text from a file.

LOTION - Static variable in class org.apache.ctakes.drugner.elements.FormElement

LOZENGE - Static variable in class org.apache.ctakes.drugner.elements.FormElement

M

MAX - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

MAXIMUM_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

MONTHLY - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

N

NEGATION_IND_FSM_CLASS - Static variable in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

Specifies the NegationIndicatorFSMClass that needs to be used

NegContextInitializerImpl - Class in org.apache.ctakes.drugner.ae.impl

NegContextInitializerImpl() - Constructor for class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

NegIndicatorFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect dates in the given input of tokens.

NegIndicatorFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.NegIndicatorFSM

Constructor

NO_ANNOTATION_TYPE_SPECIFIED - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

NO_WINDOW_SIZE_SPECIFIED - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

NOCHANGE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

NOCHANGE_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

NonIndicator - Class in org.apache.ctakes.drugner.fsm.output.util

NonIndicator(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.NonIndicator

NonIndicatorFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect dates in the given input of tokens.

NonIndicatorFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.NonIndicatorFSM

Constructor

O

OINTMENT - Static variable in class org.apache.ctakes.drugner.elements.FormElement

ORAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

ORAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

org.apache.ctakes.drugner - package org.apache.ctakes.drugner

org.apache.ctakes.drugner.ae - package org.apache.ctakes.drugner.ae

org.apache.ctakes.drugner.ae.impl - package org.apache.ctakes.drugner.ae.impl

org.apache.ctakes.drugner.cc - package org.apache.ctakes.drugner.cc

org.apache.ctakes.drugner.elements - package org.apache.ctakes.drugner.elements

org.apache.ctakes.drugner.fsm.elements.conditions - package org.apache.ctakes.drugner.fsm.elements.conditions

org.apache.ctakes.drugner.fsm.machines.elements - package org.apache.ctakes.drugner.fsm.machines.elements

org.apache.ctakes.drugner.fsm.machines.util - package org.apache.ctakes.drugner.fsm.machines.util

org.apache.ctakes.drugner.fsm.output.elements - package org.apache.ctakes.drugner.fsm.output.elements

org.apache.ctakes.drugner.fsm.output.util - package org.apache.ctakes.drugner.fsm.output.util

org.apache.ctakes.drugner.fsm.states.util - package org.apache.ctakes.drugner.fsm.states.util

org.apache.ctakes.drugner.type - package org.apache.ctakes.drugner.type

org.apache.ctakes.typesystem.type.textspan - package org.apache.ctakes.typesystem.type.textspan

OTHER - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

OTHER - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

P

PARAM_ANNOTATION_TYPE - Static variable in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

Specifies the parameter AnnotationType to iterate on, specified in the descriptor file.

PARAM_OUTPUTDIR - Static variable in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

PARAM_SEGMENTS_MEDICATION_RELATED - Static variable in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

This identifies the section ids that will be considered in generating DrugMentionAnnotaitons

PARAM_SEGMENTS_TO_SKIP - Static variable in class org.apache.ctakes.drugner.ae.CopyDrugAnnotator

Value is "sectionOverrideSet".

parseDoubleValue(Object) - Method in class org.apache.ctakes.drugner.DrugMention

parseIntValue(Object) - Method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

parseIntValue(Object) - Method in class org.apache.ctakes.drugner.DrugMention

parseStengthValue(Object) - Method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

PATCH - Static variable in class org.apache.ctakes.drugner.elements.FormElement

PILL - Static variable in class org.apache.ctakes.drugner.elements.FormElement

POWDER - Static variable in class org.apache.ctakes.drugner.elements.FormElement

PROBABLE_STATUS - Static variable in class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

process(JCas) - Method in class org.apache.ctakes.drugner.ae.CopyDrugAnnotator

process(JCas) - Method in class org.apache.ctakes.drugner.ae.DrugMentionAnnotator

processCas(CAS) - Method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

Q

QUANTITY_24 - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_BIWEEKLY - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_EIGHT - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_ELEVEN - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_EVERY_OTHER_DAY - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_FIVE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_FOUR - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_MONTHLY - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_NINE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_ONE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_PRN - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_SEVEN - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_SIX - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_TEN - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_THREE - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_TWO - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_WEEKLY - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

QUANTITY_YEARLY - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.FrequencyUnitToken

R

RangeDosageCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a RangeStrengthToken.

RangeDosageCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.RangeDosageCondition

RangeStrengthAnnotation - Class in org.apache.ctakes.drugner.type

The range portion of dosages stength determination for the Drug NER profile.

RangeStrengthAnnotation() - Constructor for class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

Never called.

RangeStrengthAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

Internal - constructor used by generator

RangeStrengthAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

RangeStrengthAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

RangeStrengthAnnotation_Type - Class in org.apache.ctakes.drugner.type

The range portion of dosages stength determination for the Drug NER profile.

RangeStrengthAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type

initialize variables to correspond with Cas Type and Features

RangeStrengthCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a RangeStrengthToken.

RangeStrengthCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.RangeStrengthCondition

RangeStrengthFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect range strength tokens in the given input of tokens.

RangeStrengthFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.RangeStrengthFSM

Constructor

RangeStrengthToken - Class in org.apache.ctakes.drugner.fsm.output.util

RangeStrengthToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.RangeStrengthToken

RangeToken - Class in org.apache.ctakes.drugner.fsm.output.util

RangeToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.RangeToken

RECTAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

RECTAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

route - Variable in class org.apache.ctakes.drugner.DrugMention

e.g oral Topical Examples include medications applied onto the skin, asthma medications, enema, eye or ear drops, decongestants, vaginal creams.

RouteAnnotation - Class in org.apache.ctakes.drugner.type

The route determination for the Drug NER profile.

RouteAnnotation() - Constructor for class org.apache.ctakes.drugner.type.RouteAnnotation

Never called.

RouteAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.RouteAnnotation

Internal - constructor used by generator

RouteAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.RouteAnnotation

RouteAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.RouteAnnotation

RouteAnnotation_Type - Class in org.apache.ctakes.drugner.type

The route determination for the Drug NER profile.

RouteAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.RouteAnnotation_Type

initialize variables to correspond with Cas Type and Features

RouteCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a RouteToken.

RouteCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.RouteCondition

RouteElement - Class in org.apache.ctakes.drugner.elements

RouteElement() - Constructor for class org.apache.ctakes.drugner.elements.RouteElement

RouteElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.RouteElement

RouteFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect route data in the given input of tokens.

RouteFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.RouteFSM

Constructor

RouteToken - Class in org.apache.ctakes.drugner.fsm.output.elements

RouteToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

S

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.ContainsSetTextValueCondition

Called to check if the conditional meets the criteria defined by this state.

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.DecimalStrengthStatusCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.DosageCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.DrugChangeStatusCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.FormCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.FractionCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.FractionStrengthCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.FrequencyUnitCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.RangeDosageCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.RangeStrengthCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.RouteCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCombinedCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCondition

satisfiedBy(Object) - Method in class org.apache.ctakes.drugner.fsm.elements.conditions.TimeCondition

setChangeStatus(String) - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

setter for changeStatus - sets Indicates the drug change status of 'stop', 'start', 'increase', 'decrease', or 'noChange'.

setChangeStatus(int, String) - Method in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

setChangeStatusBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for changeStatusBegin - sets

setChangeStatusBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setChangeStatusEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for changeStatusEnd - sets

setChangeStatusEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setConfidence(float) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for confidence - sets The confidence of the annotation.

setConfidence(int, float) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setConfidenceScoreElement(double, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setConfidenceScoreElement(double, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setDosage(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for dosage - sets Dosage refers to how many of each drug the patient is taking.

setDosage(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDosageBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for dosageBegin - sets

setDosageBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDosageElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setDosageElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setDosageEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for dosageEnd - sets

setDosageEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDrugChangeStatus(String) - Method in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

setDrugChangeStatus(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for drugChangeStatus - sets Status refers to the whether the medication is currently being taken or not.

setDrugChangeStatus(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDrugChangeStatusElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setDrugChangeStatusElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setDuration(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for duration - sets Duration refers to for how long the patient is expected to take the drug.

setDuration(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDurationBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for durationBegin - sets

setDurationBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setDurationElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setDurationElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setDurationEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for durationEnd - sets

setDurationEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setEndDateElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setEndDateElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setForm(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for form - sets Form refers to the physical appearance of the drug.

setForm(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFormBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for formBegin - sets

setFormBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFormElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setFormElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setFormEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for formEnd - sets

setFormEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFormMethod(int) - Method in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

setFrequency(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for frequency - sets Frequency refers to how often the patient needs to take the drug.

setFrequency(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFrequencyBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for frequencyBegin - sets

setFrequencyBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFrequencyElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setFrequencyElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setFrequencyEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for frequencyEnd - sets

setFrequencyEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFrequencyUnit(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for frequencyUnit - sets

setFrequencyUnit(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFrequencyUnitElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setFrequencyUnitElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setFuBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for fuBegin - sets

setFuBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setFuEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for fuEnd - sets

setFuEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setIntakeMethod(String) - Method in class org.apache.ctakes.drugner.type.RouteAnnotation

setter for intakeMethod - sets Means by which the drug was taken.

setIntakeMethod(int, String) - Method in class org.apache.ctakes.drugner.type.RouteAnnotation_Type

setParentSectionId(String) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for parentSectionId - sets The section in which the subsection was found.

setParentSectionId(int, String) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setPeriod(float) - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

setter for period - sets The periodic unit used, e.g day, month, hour, etc.

setPeriod(int, float) - Method in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

setPrimaryAssociatedCodeElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setPrimaryAssociatedCodeElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setReason(FSArray) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for reason - sets

setReason(int, TOP) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

indexed setter for reason - sets an indexed value -

setReason(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setReason(int, int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setRoute(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for route - sets Medication route refers to the way that a drug is introduced into the body.

setRoute(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setRouteBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for routeBegin - sets

setRouteBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setRouteElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setRouteElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setRouteEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for routeEnd - sets

setRouteEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setSecondaryAssociatedCodeElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setSecondaryAssociatedCodeElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setSentenceID(String) - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation

setter for sentenceID - sets

setSentenceID(int, String) - Method in class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

setStartDate(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for startDate - sets

setStartDate(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStartDateElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setStartDateElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setStatus(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for status - sets

setStatus(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStatus(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for status - sets Status of 'possible', 'history of', or 'family history of'.

setStatus(int, int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setStrength(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for strength - sets

setStrength(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStrengthBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for strengthBegin - sets

setStrengthBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStrengthElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setStrengthElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setStrengthEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for strengthEnd - sets

setStrengthEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStrengthUnit(String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for strengthUnit - sets

setStrengthUnit(int, String) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setStrengthUnitElement(String, int, int) - Method in class org.apache.ctakes.drugner.DrugMention

setStrengthUnitElement(String, int, int) - Method in interface org.apache.ctakes.drugner.DrugModel

setSuBegin(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for suBegin - sets

setSuBegin(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

setSubSectionBodyBegin(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for subSectionBodyBegin - sets Sub-section body begin offset.

setSubSectionBodyBegin(int, int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setSubSectionBodyEnd(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for subSectionBodyEnd - sets Sub-section body end offset.

setSubSectionBodyEnd(int, int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setSubSectionHeaderBegin(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for subSectionHeaderBegin - sets Begin offset of subSection header

setSubSectionHeaderBegin(int, int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setSubSectionHeaderEnd(int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation

setter for subSectionHeaderEnd - sets Ending offset of subsection header

setSubSectionHeaderEnd(int, int) - Method in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

setSuEnd(int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

setter for suEnd - sets

setSuEnd(int, int) - Method in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

SHAMPOO - Static variable in class org.apache.ctakes.drugner.elements.FormElement

SOAP - Static variable in class org.apache.ctakes.drugner.elements.FormElement

SOLUTION - Static variable in class org.apache.ctakes.drugner.elements.FormElement

SPRAY - Static variable in class org.apache.ctakes.drugner.elements.FormElement

START - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

START_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

startDate - Variable in class org.apache.ctakes.drugner.DrugMention

If there is a specific date in the note associated with the drug mention, the specific date.

StartDateElement - Class in org.apache.ctakes.drugner.elements

StartDateElement() - Constructor for class org.apache.ctakes.drugner.elements.StartDateElement

StartDateElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.StartDateElement

StatusIndicatorFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect ???

StatusIndicatorFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.StatusIndicatorFSM

Constructor

STOP - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

STOP_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

store(String, String) - Method in class org.apache.ctakes.drugner.cc.ConsumeNamedEntityRecordModel

Loads text from a file.

strength - Variable in class org.apache.ctakes.drugner.DrugMention

StrengthAnnotation - Class in org.apache.ctakes.drugner.type

Holds the value representing the unit of the drug dosage.

StrengthAnnotation() - Constructor for class org.apache.ctakes.drugner.type.StrengthAnnotation

Never called.

StrengthAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.StrengthAnnotation

Internal - constructor used by generator

StrengthAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.StrengthAnnotation

StrengthAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.StrengthAnnotation

StrengthAnnotation_Type - Class in org.apache.ctakes.drugner.type

Holds the value representing the unit of the drug dosage.

StrengthAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.StrengthAnnotation_Type

initialize variables to correspond with Cas Type and Features

StrengthCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a StrengthToken.

StrengthCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthCondition

StrengthElement - Class in org.apache.ctakes.drugner.elements

StrengthElement() - Constructor for class org.apache.ctakes.drugner.elements.StrengthElement

StrengthElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.StrengthElement

StrengthFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect dosages in the given input of tokens.

StrengthFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.StrengthFSM

Constructor

StrengthToken - Class in org.apache.ctakes.drugner.fsm.output.elements

StrengthToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.StrengthToken

strengthUnit - Variable in class org.apache.ctakes.drugner.DrugMention

Span the drug form, if available.

StrengthUnitAnnotation - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013 XML source: C:/build-Apache-cTAKES/ctakes-3.1.1/rc2/checkout/ctakes/target/checkout/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml

StrengthUnitAnnotation() - Constructor for class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

Never called.

StrengthUnitAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

Internal - constructor used by generator

StrengthUnitAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

StrengthUnitAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

StrengthUnitAnnotation_Type - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013

StrengthUnitAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type

initialize variables to correspond with Cas Type and Features

StrengthUnitCombinedCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a StrengthToken.

StrengthUnitCombinedCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCombinedCondition

StrengthUnitCombinedToken - Class in org.apache.ctakes.drugner.fsm.output.elements

StrengthUnitCombinedToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.StrengthUnitCombinedToken

StrengthUnitCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a StrengthToken.

StrengthUnitCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.StrengthUnitCondition

StrengthUnitElement - Class in org.apache.ctakes.drugner.elements

StrengthUnitElement() - Constructor for class org.apache.ctakes.drugner.elements.StrengthUnitElement

StrengthUnitElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.StrengthUnitElement

StrengthUnitFSM - Class in org.apache.ctakes.drugner.fsm.machines.elements

Uses one or more finite state machines to detect dosages in the given input of tokens.

StrengthUnitFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.elements.StrengthUnitFSM

Constructor

StrengthUnitToken - Class in org.apache.ctakes.drugner.fsm.output.elements

StrengthUnitToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.elements.StrengthUnitToken

SUBCUTANEOUS - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

SUBCUTANEOUS - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

SubSectionAnnotation - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013 XML source: C:/build-Apache-cTAKES/ctakes-3.1.1/rc2/checkout/ctakes/target/checkout/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/types/TypeSystem.xml

SubSectionAnnotation() - Constructor for class org.apache.ctakes.drugner.type.SubSectionAnnotation

Never called.

SubSectionAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.SubSectionAnnotation

Internal - constructor used by generator

SubSectionAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.SubSectionAnnotation

SubSectionAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.SubSectionAnnotation

SubSectionAnnotation_Type - Class in org.apache.ctakes.drugner.type

Updated by JCasGen Thu Nov 28 10:33:02 CST 2013

SubSectionAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

initialize variables to correspond with Cas Type and Features

SubSectionIndicator - Class in org.apache.ctakes.drugner.fsm.output.util

SubSectionIndicator(int, int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.SubSectionIndicator

SubSectionIndicatorFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect sub-sections in the given input of tokens.

SubSectionIndicatorFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.SubSectionIndicatorFSM

Constructor

SuffixFrequencyFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect frequency suffix data in the given input of tokens.

SuffixFrequencyFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.SuffixFrequencyFSM

Constructor

SuffixFrequencyToken - Class in org.apache.ctakes.drugner.fsm.output.util

SuffixFrequencyToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.SuffixFrequencyToken

SuffixStrengthAnnotation - Class in org.apache.ctakes.drugner.type

The suffix portion of dosage strength determination for the Drug NER profile.

SuffixStrengthAnnotation() - Constructor for class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

Never called.

SuffixStrengthAnnotation(int, TOP_Type) - Constructor for class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

Internal - constructor used by generator

SuffixStrengthAnnotation(JCas) - Constructor for class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

SuffixStrengthAnnotation(JCas, int, int) - Constructor for class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

SuffixStrengthAnnotation_Type - Class in org.apache.ctakes.drugner.type

The suffix portion of dosage strength determination for the Drug NER profile.

SuffixStrengthAnnotation_Type(JCas, Type) - Constructor for class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type

initialize variables to correspond with Cas Type and Features

SuffixStrengthFSM - Class in org.apache.ctakes.drugner.fsm.machines.util

Uses one or more finite state machines to detect strength suffix information adjoined to dosage data in the given input of tokens.

SuffixStrengthFSM() - Constructor for class org.apache.ctakes.drugner.fsm.machines.util.SuffixStrengthFSM

Constructor

SuffixStrengthToken - Class in org.apache.ctakes.drugner.fsm.output.util

SuffixStrengthToken(int, int) - Constructor for class org.apache.ctakes.drugner.fsm.output.util.SuffixStrengthToken

SUM - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.DrugChangeStatusToken

SUMMATION_STATUS - Static variable in class org.apache.ctakes.drugner.elements.DrugChangeStatusElement

SUPPOSITORY - Static variable in class org.apache.ctakes.drugner.elements.FormElement

SYRINGE - Static variable in class org.apache.ctakes.drugner.elements.FormElement

SYRUP - Static variable in class org.apache.ctakes.drugner.elements.FormElement

T

TABLET - Static variable in class org.apache.ctakes.drugner.elements.FormElement

TextMentionElement - Class in org.apache.ctakes.drugner.elements

TextMentionElement() - Constructor for class org.apache.ctakes.drugner.elements.TextMentionElement

TextMentionElement(String, int, int) - Constructor for class org.apache.ctakes.drugner.elements.TextMentionElement

TimeCondition - Class in org.apache.ctakes.drugner.fsm.elements.conditions

Checks whether a token is a TimeToken.

TimeCondition() - Constructor for class org.apache.ctakes.drugner.fsm.elements.conditions.TimeCondition

TOPICAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

TOPICAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

TRANSDERMAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

TRANSDERMAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

TRANSMUCOSAL - Static variable in class org.apache.ctakes.drugner.elements.RouteElement

TRANSMUCOSAL - Static variable in class org.apache.ctakes.drugner.fsm.output.elements.RouteToken

type - Static variable in class org.apache.ctakes.drugner.type.ChunkAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.DosagesAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.DurationAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.FormAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.FrequencyAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.RouteAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.StrengthAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.SubSectionAnnotation

type - Static variable in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

type - Static variable in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.ChunkAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.ChunkAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DecimalStrengthAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DosagesAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DosagesAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DrugChangeStatusAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DrugMentionAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DrugMentionAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DurationAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.DurationAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FormAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FormAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FractionStrengthAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FrequencyAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FrequencyAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.FrequencyUnitAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.RangeStrengthAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.RouteAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.RouteAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.StrengthAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.StrengthAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.StrengthUnitAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.SubSectionAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.SubSectionAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation

typeIndexID - Static variable in class org.apache.ctakes.drugner.type.SuffixStrengthAnnotation_Type

typeIndexID - Static variable in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation

typeIndexID - Static variable in class org.apache.ctakes.typesystem.type.textspan.DrugLookupWindowAnnotation_Type

W

WEEKLY - Static variable in class org.apache.ctakes.drugner.elements.FrequencyUnitElement

wrapAsFsmTokens(List) - Method in class org.apache.ctakes.drugner.ae.impl.NegContextInitializerImpl

A B C D E F G H I L M N O P Q R S T W