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Apache cTAKES 4.0.0 API

Packages 
Package Description
org.apache.ctakes.assertion.attributes  
org.apache.ctakes.assertion.attributes.features  
org.apache.ctakes.assertion.attributes.features.selection  
org.apache.ctakes.assertion.attributes.generic  
org.apache.ctakes.assertion.attributes.history  
org.apache.ctakes.assertion.attributes.subject  
org.apache.ctakes.assertion.cc  
org.apache.ctakes.assertion.cr  
org.apache.ctakes.assertion.eval  
org.apache.ctakes.assertion.medfacts  
org.apache.ctakes.assertion.medfacts.cleartk  
org.apache.ctakes.assertion.medfacts.cleartk.extractors  
org.apache.ctakes.assertion.medfacts.i2b2.api  
org.apache.ctakes.assertion.medfacts.types  
org.apache.ctakes.assertion.pipelines  
org.apache.ctakes.assertion.stub  
org.apache.ctakes.assertion.train  
org.apache.ctakes.assertion.util  
org.apache.ctakes.assertion.zoner.types  
org.apache.ctakes.chunker.ae  
org.apache.ctakes.chunker.ae.adjuster  
org.apache.ctakes.clinicalpipeline  
org.apache.ctakes.clinicalpipeline.ae  
org.apache.ctakes.clinicalpipeline.runtime  
org.apache.ctakes.constituency.parser  
org.apache.ctakes.constituency.parser.ae  
org.apache.ctakes.constituency.parser.treekernel  
org.apache.ctakes.constituency.parser.uima.co  
org.apache.ctakes.constituency.parser.uima.type  
org.apache.ctakes.constituency.parser.util  
org.apache.ctakes.contexttokenizer.ae  
org.apache.ctakes.core.ae  
org.apache.ctakes.core.cc  
org.apache.ctakes.core.cc.pretty  
org.apache.ctakes.core.cc.pretty.cell  
org.apache.ctakes.core.cc.pretty.html  
org.apache.ctakes.core.cc.pretty.plaintext  
org.apache.ctakes.core.cc.pretty.row  
org.apache.ctakes.core.cc.pretty.textspan  
org.apache.ctakes.core.cc.property.plaintext  
org.apache.ctakes.core.ci  
org.apache.ctakes.core.cleartk  
org.apache.ctakes.core.config  
org.apache.ctakes.core.cpe  
org.apache.ctakes.core.cr  
org.apache.ctakes.core.fsm.adapters
This package contains adapters for JCas token objects comforming to the input interfaces used by the FSM project.
org.apache.ctakes.core.fsm.condition  
org.apache.ctakes.core.fsm.machine  
org.apache.ctakes.core.fsm.output  
org.apache.ctakes.core.fsm.state  
org.apache.ctakes.core.fsm.token  
org.apache.ctakes.core.fsm.token.adapter  
org.apache.ctakes.core.knowtator  
org.apache.ctakes.core.nlp.tokenizer  
org.apache.ctakes.core.pipeline  
org.apache.ctakes.core.resource  
org.apache.ctakes.core.sentence  
org.apache.ctakes.core.util  
org.apache.ctakes.core.util.collection  
org.apache.ctakes.core.util.regex  
org.apache.ctakes.coreference.ae  
org.apache.ctakes.coreference.ae.features  
org.apache.ctakes.coreference.ae.features.cluster  
org.apache.ctakes.coreference.ae.features.salience  
org.apache.ctakes.coreference.ae.pairing  
org.apache.ctakes.coreference.ae.pairing.cluster  
org.apache.ctakes.coreference.cc  
org.apache.ctakes.coreference.eval  
org.apache.ctakes.coreference.eval.helpers  
org.apache.ctakes.coreference.extractors  
org.apache.ctakes.coreference.factory  
org.apache.ctakes.coreference.treekernel.training  
org.apache.ctakes.coreference.type  
org.apache.ctakes.coreference.util  
org.apache.ctakes.dependency.parser  
org.apache.ctakes.dependency.parser.ae  
org.apache.ctakes.dependency.parser.ae.util  
org.apache.ctakes.dependency.parser.cr  
org.apache.ctakes.dependency.parser.util  
org.apache.ctakes.dictionary.assertion  
org.apache.ctakes.dictionary.lookup  
org.apache.ctakes.dictionary.lookup.ae  
org.apache.ctakes.dictionary.lookup.algorithms  
org.apache.ctakes.dictionary.lookup.filter  
org.apache.ctakes.dictionary.lookup.jdbc  
org.apache.ctakes.dictionary.lookup.lucene  
org.apache.ctakes.dictionary.lookup.phrasebuilder  
org.apache.ctakes.dictionary.lookup.strtable  
org.apache.ctakes.dictionary.lookup.vo  
org.apache.ctakes.dictionary.lookup2.ae  
org.apache.ctakes.dictionary.lookup2.concept  
org.apache.ctakes.dictionary.lookup2.consumer  
org.apache.ctakes.dictionary.lookup2.dictionary  
org.apache.ctakes.dictionary.lookup2.term  
org.apache.ctakes.dictionary.lookup2.textspan  
org.apache.ctakes.dictionary.lookup2.util  
org.apache.ctakes.drugner  
org.apache.ctakes.drugner.ae  
org.apache.ctakes.drugner.ae.impl  
org.apache.ctakes.drugner.cc  
org.apache.ctakes.drugner.elements  
org.apache.ctakes.drugner.fsm.elements.conditions  
org.apache.ctakes.drugner.fsm.machines.elements  
org.apache.ctakes.drugner.fsm.machines.util  
org.apache.ctakes.drugner.fsm.output.elements  
org.apache.ctakes.drugner.fsm.output.util  
org.apache.ctakes.drugner.fsm.states.util  
org.apache.ctakes.drugner.type  
org.apache.ctakes.examples.ae  
org.apache.ctakes.examples.pipeline  
org.apache.ctakes.gui.action  
org.apache.ctakes.gui.component  
org.apache.ctakes.gui.dictionary  
org.apache.ctakes.gui.dictionary.umls  
org.apache.ctakes.gui.dictionary.util  
org.apache.ctakes.gui.pipeline  
org.apache.ctakes.gui.pipeline.bit  
org.apache.ctakes.gui.pipeline.bit.available  
org.apache.ctakes.gui.pipeline.bit.info  
org.apache.ctakes.gui.pipeline.bit.parameter  
org.apache.ctakes.gui.pipeline.bit.user  
org.apache.ctakes.gui.pipeline.piper  
org.apache.ctakes.gui.util  
org.apache.ctakes.jdl
Copied from https://code.google.com/p/jdl-prj/ Following modifications: fixed batch insert support specification of tab as delimiter disable text encapsulators by defalt in CsvLoader change package names
org.apache.ctakes.jdl.common
Common utility.
org.apache.ctakes.jdl.data.base
Database.
org.apache.ctakes.jdl.data.loader
Loader of data.
org.apache.ctakes.jdl.data.xml
XML data.
org.apache.ctakes.jdl.data.xml.jaxb
JAXB utility.
org.apache.ctakes.jdl.schema.xdl  
org.apache.ctakes.lvg.ae  
org.apache.ctakes.lvg.resource  
org.apache.ctakes.necontexts  
org.apache.ctakes.necontexts.negation  
org.apache.ctakes.necontexts.status  
org.apache.ctakes.postagger  
org.apache.ctakes.preprocessor  
org.apache.ctakes.preprocessor.ae  
org.apache.ctakes.preprocessor.test  
org.apache.ctakes.relationextractor.ae  
org.apache.ctakes.relationextractor.ae.baselines  
org.apache.ctakes.relationextractor.ae.features  
org.apache.ctakes.relationextractor.data  
org.apache.ctakes.relationextractor.data.analysis  
org.apache.ctakes.relationextractor.eval  
org.apache.ctakes.relationextractor.knowtator  
org.apache.ctakes.relationextractor.metastasis  
org.apache.ctakes.relationextractor.pipelines  
org.apache.ctakes.sideeffect.ae  
org.apache.ctakes.sideeffect.cc  
org.apache.ctakes.sideeffect.type  
org.apache.ctakes.sideeffect.util  
org.apache.ctakes.smokingstatus  
org.apache.ctakes.smokingstatus.ae  
org.apache.ctakes.smokingstatus.cc  
org.apache.ctakes.smokingstatus.context  
org.apache.ctakes.smokingstatus.context.negation  
org.apache.ctakes.smokingstatus.i2b2.type  
org.apache.ctakes.smokingstatus.lookup.ae  
org.apache.ctakes.smokingstatus.machine  
org.apache.ctakes.smokingstatus.MLutil  
org.apache.ctakes.smokingstatus.patientLevel  
org.apache.ctakes.smokingstatus.type  
org.apache.ctakes.smokingstatus.type.libsvm  
org.apache.ctakes.smokingstatus.util  
org.apache.ctakes.template.filler.ae  
org.apache.ctakes.temporal.ae  
org.apache.ctakes.temporal.ae.baselines  
org.apache.ctakes.temporal.ae.feature  
org.apache.ctakes.temporal.ae.feature.duration  
org.apache.ctakes.temporal.ae.feature.selection  
org.apache.ctakes.temporal.ae.feature.treekernel  
org.apache.ctakes.temporal.data.analysis  
org.apache.ctakes.temporal.duration  
org.apache.ctakes.temporal.eval  
org.apache.ctakes.temporal.keras  
org.apache.ctakes.temporal.nn.ae  
org.apache.ctakes.temporal.nn.data  
org.apache.ctakes.temporal.nn.eval  
org.apache.ctakes.temporal.pipelines  
org.apache.ctakes.temporal.utils  
org.apache.ctakes.typesystem.type.constants  
org.apache.ctakes.typesystem.type.refsem  
org.apache.ctakes.typesystem.type.relation  
org.apache.ctakes.typesystem.type.structured  
org.apache.ctakes.typesystem.type.syntax  
org.apache.ctakes.typesystem.type.temporary.assertion  
org.apache.ctakes.typesystem.type.textsem  
org.apache.ctakes.typesystem.type.textspan  
org.apache.ctakes.typesystem.type.util  
org.apache.ctakes.utils.distsem  
org.apache.ctakes.utils.env  
org.apache.ctakes.utils.kernel  
org.apache.ctakes.utils.struct  
org.apache.ctakes.utils.test  
org.apache.ctakes.utils.tree  
org.apache.ctakes.utils.wiki  
org.apache.ctakes.utils.xcas_comparison  
org.apache.ctakes.ytex  
org.apache.ctakes.ytex.dao  
org.apache.ctakes.ytex.kernel  
org.apache.ctakes.ytex.kernel.dao  
org.apache.ctakes.ytex.kernel.evaluator  
org.apache.ctakes.ytex.kernel.metric  
org.apache.ctakes.ytex.kernel.model  
org.apache.ctakes.ytex.kernel.pagerank  
org.apache.ctakes.ytex.kernel.tree  
org.apache.ctakes.ytex.kernel.wsd  
org.apache.ctakes.ytex.libsvm  
org.apache.ctakes.ytex.R  
org.apache.ctakes.ytex.semil  
org.apache.ctakes.ytex.sparsematrix  
org.apache.ctakes.ytex.svmlight  
org.apache.ctakes.ytex.tools  
org.apache.ctakes.ytex.tools.docanalyzer  
org.apache.ctakes.ytex.uima  
org.apache.ctakes.ytex.uima.annotators  
org.apache.ctakes.ytex.uima.dao  
org.apache.ctakes.ytex.uima.lookup.ae  
org.apache.ctakes.ytex.uima.mapper  
org.apache.ctakes.ytex.uima.model  
org.apache.ctakes.ytex.uima.resource  
org.apache.ctakes.ytex.uima.types  
org.apache.ctakes.ytex.umls.dao  
org.apache.ctakes.ytex.umls.model  
org.apache.ctakes.ytex.web.search  
org.apache.ctakes.ytex.weka  
org.apache.ctakes.ytex.ws  
org.mitre.medfacts.uima  
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