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Package Hierarchies:
org.apache.ctakes.assertion.attributes
,
org.apache.ctakes.assertion.attributes.features
,
org.apache.ctakes.assertion.attributes.features.selection
,
org.apache.ctakes.assertion.attributes.generic
,
org.apache.ctakes.assertion.attributes.history
,
org.apache.ctakes.assertion.attributes.subject
,
org.apache.ctakes.assertion.cc
,
org.apache.ctakes.assertion.cr
,
org.apache.ctakes.assertion.eval
,
org.apache.ctakes.assertion.medfacts
,
org.apache.ctakes.assertion.medfacts.cleartk
,
org.apache.ctakes.assertion.medfacts.cleartk.extractors
,
org.apache.ctakes.assertion.medfacts.i2b2.api
,
org.apache.ctakes.assertion.medfacts.types
,
org.apache.ctakes.assertion.pipelines
,
org.apache.ctakes.assertion.train
,
org.apache.ctakes.assertion.util
,
org.apache.ctakes.assertion.zoner.types
,
org.apache.ctakes.chunker.ae
,
org.apache.ctakes.chunker.ae.adjuster
,
org.apache.ctakes.clinicalpipeline
,
org.apache.ctakes.clinicalpipeline.ae
,
org.apache.ctakes.clinicalpipeline.runtime
,
org.apache.ctakes.constituency.parser
,
org.apache.ctakes.constituency.parser.ae
,
org.apache.ctakes.constituency.parser.treekernel
,
org.apache.ctakes.constituency.parser.uima.co
,
org.apache.ctakes.constituency.parser.uima.type
,
org.apache.ctakes.constituency.parser.util
,
org.apache.ctakes.contexttokenizer.ae
,
org.apache.ctakes.core.ae
,
org.apache.ctakes.core.cc
,
org.apache.ctakes.core.ci
,
org.apache.ctakes.core.cpe
,
org.apache.ctakes.core.cr
,
org.apache.ctakes.core.fsm.adapters
,
org.apache.ctakes.core.fsm.condition
,
org.apache.ctakes.core.fsm.machine
,
org.apache.ctakes.core.fsm.output
,
org.apache.ctakes.core.fsm.state
,
org.apache.ctakes.core.fsm.token
,
org.apache.ctakes.core.fsm.token.adapter
,
org.apache.ctakes.core.knowtator
,
org.apache.ctakes.core.nlp.tokenizer
,
org.apache.ctakes.core.resource
,
org.apache.ctakes.core.sentence
,
org.apache.ctakes.core.util
,
org.apache.ctakes.coreference.ae
,
org.apache.ctakes.coreference.cc
,
org.apache.ctakes.coreference.eval.helpers
,
org.apache.ctakes.coreference.treekernel.training
,
org.apache.ctakes.coreference.type
,
org.apache.ctakes.coreference.util
,
org.apache.ctakes.dependency.parser
,
org.apache.ctakes.dependency.parser.ae
,
org.apache.ctakes.dependency.parser.ae.util
,
org.apache.ctakes.dependency.parser.cr
,
org.apache.ctakes.dependency.parser.util
,
org.apache.ctakes.dictionary.assertion
,
org.apache.ctakes.dictionary.lookup
,
org.apache.ctakes.dictionary.lookup.ae
,
org.apache.ctakes.dictionary.lookup.algorithms
,
org.apache.ctakes.dictionary.lookup.filter
,
org.apache.ctakes.dictionary.lookup.jdbc
,
org.apache.ctakes.dictionary.lookup.lucene
,
org.apache.ctakes.dictionary.lookup.phrasebuilder
,
org.apache.ctakes.dictionary.lookup.strtable
,
org.apache.ctakes.dictionary.lookup.vo
,
org.apache.ctakes.dictionary.lookup2.ae
,
org.apache.ctakes.dictionary.lookup2.concept
,
org.apache.ctakes.dictionary.lookup2.consumer
,
org.apache.ctakes.dictionary.lookup2.dictionary
,
org.apache.ctakes.dictionary.lookup2.term
,
org.apache.ctakes.dictionary.lookup2.textspan
,
org.apache.ctakes.dictionary.lookup2.util
,
org.apache.ctakes.dictionary.lookup2.util.collection
,
org.apache.ctakes.drugner
,
org.apache.ctakes.drugner.ae
,
org.apache.ctakes.drugner.ae.impl
,
org.apache.ctakes.drugner.cc
,
org.apache.ctakes.drugner.elements
,
org.apache.ctakes.drugner.fsm.elements.conditions
,
org.apache.ctakes.drugner.fsm.machines.elements
,
org.apache.ctakes.drugner.fsm.machines.util
,
org.apache.ctakes.drugner.fsm.output.elements
,
org.apache.ctakes.drugner.fsm.output.util
,
org.apache.ctakes.drugner.fsm.states.util
,
org.apache.ctakes.drugner.type
,
org.apache.ctakes.examples.ae
,
org.apache.ctakes.examples.pipelines
,
org.apache.ctakes.jdl
,
org.apache.ctakes.jdl.common
,
org.apache.ctakes.jdl.data.base
,
org.apache.ctakes.jdl.data.loader
,
org.apache.ctakes.jdl.data.xml
,
org.apache.ctakes.jdl.data.xml.jaxb
,
org.apache.ctakes.lvg.ae
,
org.apache.ctakes.lvg.resource
,
org.apache.ctakes.necontexts
,
org.apache.ctakes.necontexts.negation
,
org.apache.ctakes.necontexts.status
,
org.apache.ctakes.postagger
,
org.apache.ctakes.preprocessor
,
org.apache.ctakes.preprocessor.ae
,
org.apache.ctakes.preprocessor.test
,
org.apache.ctakes.relationextractor.ae
,
org.apache.ctakes.relationextractor.ae.baselines
,
org.apache.ctakes.relationextractor.ae.features
,
org.apache.ctakes.relationextractor.data
,
org.apache.ctakes.relationextractor.data.analysis
,
org.apache.ctakes.relationextractor.eval
,
org.apache.ctakes.relationextractor.knowtator
,
org.apache.ctakes.relationextractor.pipelines
,
org.apache.ctakes.sideeffect.ae
,
org.apache.ctakes.sideeffect.cc
,
org.apache.ctakes.sideeffect.type
,
org.apache.ctakes.sideeffect.util
,
org.apache.ctakes.smokingstatus
,
org.apache.ctakes.smokingstatus.ae
,
org.apache.ctakes.smokingstatus.cc
,
org.apache.ctakes.smokingstatus.context
,
org.apache.ctakes.smokingstatus.context.negation
,
org.apache.ctakes.smokingstatus.i2b2.type
,
org.apache.ctakes.smokingstatus.lookup.ae
,
org.apache.ctakes.smokingstatus.machine
,
org.apache.ctakes.smokingstatus.MLutil
,
org.apache.ctakes.smokingstatus.patientLevel
,
org.apache.ctakes.smokingstatus.type
,
org.apache.ctakes.smokingstatus.type.libsvm
,
org.apache.ctakes.smokingstatus.util
,
org.apache.ctakes.template.filler.ae
,
org.apache.ctakes.temporal.ae
,
org.apache.ctakes.temporal.ae.baselines
,
org.apache.ctakes.temporal.ae.feature
,
org.apache.ctakes.temporal.ae.feature.duration
,
org.apache.ctakes.temporal.ae.feature.selection
,
org.apache.ctakes.temporal.ae.feature.treekernel
,
org.apache.ctakes.temporal.data.analysis
,
org.apache.ctakes.temporal.duration
,
org.apache.ctakes.temporal.eval
,
org.apache.ctakes.temporal.pipelines
,
org.apache.ctakes.temporal.utils
,
org.apache.ctakes.typesystem.type.constants
,
org.apache.ctakes.typesystem.type.refsem
,
org.apache.ctakes.typesystem.type.relation
,
org.apache.ctakes.typesystem.type.structured
,
org.apache.ctakes.typesystem.type.syntax
,
org.apache.ctakes.typesystem.type.temporary.assertion
,
org.apache.ctakes.typesystem.type.textsem
,
org.apache.ctakes.typesystem.type.textspan
,
org.apache.ctakes.typesystem.type.util
,
org.apache.ctakes.utils.build
,
org.apache.ctakes.utils.distsem
,
org.apache.ctakes.utils.env
,
org.apache.ctakes.utils.kernel
,
org.apache.ctakes.utils.struct
,
org.apache.ctakes.utils.test
,
org.apache.ctakes.utils.tree
,
org.apache.ctakes.utils.wiki
,
org.apache.ctakes.utils.xcas_comparison
,
org.apache.ctakes.ytex
,
org.apache.ctakes.ytex.dao
,
org.apache.ctakes.ytex.kernel
,
org.apache.ctakes.ytex.kernel.dao
,
org.apache.ctakes.ytex.kernel.evaluator
,
org.apache.ctakes.ytex.kernel.metric
,
org.apache.ctakes.ytex.kernel.model
,
org.apache.ctakes.ytex.kernel.pagerank
,
org.apache.ctakes.ytex.kernel.tree
,
org.apache.ctakes.ytex.kernel.wsd
,
org.apache.ctakes.ytex.libsvm
,
org.apache.ctakes.ytex.R
,
org.apache.ctakes.ytex.semil
,
org.apache.ctakes.ytex.sparsematrix
,
org.apache.ctakes.ytex.svmlight
,
org.apache.ctakes.ytex.tools
,
org.apache.ctakes.ytex.tools.docanalyzer
,
org.apache.ctakes.ytex.uima
,
org.apache.ctakes.ytex.uima.annotators
,
org.apache.ctakes.ytex.uima.dao
,
org.apache.ctakes.ytex.uima.lookup.ae
,
org.apache.ctakes.ytex.uima.mapper
,
org.apache.ctakes.ytex.uima.model
,
org.apache.ctakes.ytex.uima.resource
,
org.apache.ctakes.ytex.uima.types
,
org.apache.ctakes.ytex.umls.dao
,
org.apache.ctakes.ytex.umls.model
,
org.apache.ctakes.ytex.web.search
,
org.apache.ctakes.ytex.weka
,
org.apache.ctakes.ytex.ws
Class Hierarchy
java.lang.Object
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
ConditionalCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
GenericCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
HistoryCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
PolarityCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
PolarityFedaCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
SubjectCleartkAnalysisEngine
org.apache.ctakes.assertion.medfacts.cleartk.
UncertaintyCleartkAnalysisEngine
org.apache.ctakes.assertion.eval.
AssertionEvaluation
org.apache.ctakes.assertion.eval.
AssertionEvaluation.StringInstanceDataWriter
org.apache.ctakes.temporal.ae.
ContextualModalityAnnotator
org.apache.ctakes.temporal.ae.
DocTimeRelAnnotator
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase
<STATISTICS_TYPE>
org.apache.ctakes.temporal.eval.
EvaluationOfAnnotationSpans_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKEventSpans
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKTimeSpans
org.apache.ctakes.temporal.eval.
EvaluationOfEventSpans
org.apache.ctakes.temporal.eval.
EvaluationOfMetaTimeExpressionExtractor
org.apache.ctakes.temporal.eval.
EvaluationOfNEPredicateEventSpans
org.apache.ctakes.temporal.eval.
EvaluationOfTimeSpans
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKEventProperties
org.apache.ctakes.temporal.eval.
EvaluationOfEventProperties
org.apache.ctakes.temporal.eval.
EvaluationOfTemporalRelations_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKRelations
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventRelations
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations
org.apache.ctakes.temporal.ae.
EventAdmissionTimeAnnotator
org.apache.ctakes.temporal.ae.
EventDischargeTimeAnnotator
org.apache.ctakes.assertion.attributes.features.selection.
FeatureSelection
<OUTCOME_T>
org.apache.ctakes.assertion.attributes.features.selection.
Chi2FeatureSelection
<OUTCOME_T>
org.apache.ctakes.assertion.attributes.features.selection.
MutualInformationFeatureSelection
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
FeatureSelection
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
BinaryAlphaFeatureSelection
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
Chi2FeatureSelection
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
MutualInformationFeatureSelection
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
OddsRatioFeatureSelection
<OUTCOME_T>
org.apache.ctakes.relationextractor.ae.
ModifierExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline1EntityMentionPairRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline2DegreeOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline2EntityMentionPairRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline3DegreeOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline3EntityMentionPairRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline4EntityMentionPairRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
CausesBringsAboutRelationExtractorAnnotator
org.apache.ctakes.temporal.ae.
ConsecutiveSentencesEventEventRelationAnnotator
org.apache.ctakes.temporal.ae.
ConsecutiveSentencesEventTimeRelationAnnotator
org.apache.ctakes.relationextractor.ae.
DegreeOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline1DegreeOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.baselines.
Baseline4DegreeOfRelationExtractorAnnotator
org.apache.ctakes.temporal.ae.
EventEventI2B2RelationAnnotator
org.apache.ctakes.temporal.ae.
EventEventRelationAnnotator
org.apache.ctakes.temporal.ae.
EventTimeI2B2RelationAnnotator
org.apache.ctakes.temporal.ae.
EventTimeRelationAnnotator
org.apache.ctakes.temporal.ae.
EventTimeSelfRelationAnnotator
org.apache.ctakes.temporal.ae.baselines.
F1BaselineEventTimeRelationAnnotator
org.apache.ctakes.relationextractor.ae.
LocationOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
ManagesTreatsRelationExtractorAnnotator
org.apache.ctakes.temporal.ae.baselines.
PrecisionBaselineEventTimeRelationAnnotator
org.apache.ctakes.temporal.ae.baselines.
RecallBaselineEventEventRelationAnnotator
org.apache.ctakes.temporal.ae.baselines.
RecallBaselineEventTimeRelationAnnotator
org.apache.ctakes.temporal.ae.baselines.
TimidBaselineEventTimeRelationAnnotator
org.apache.ctakes.temporal.ae.baselines.
TreeHeightBaseline
org.apache.ctakes.relationextractor.eval.
SHARPXMI.Evaluation_ImplBase
org.apache.ctakes.relationextractor.eval.
ModifierExtractorEvaluation
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation
org.apache.ctakes.temporal.ae.
TemporalEntityAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
BackwardsTimeAnnotator
org.apache.ctakes.temporal.ae.
ConstituencyBasedTimeAnnotator
org.apache.ctakes.temporal.ae.
EventAnnotator
org.apache.ctakes.temporal.ae.
NEPredicateEventAnnotator
org.apache.ctakes.temporal.ae.
TimeAnnotator
org.apache.ctakes.temporal.ae.
TemporalSequenceAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
CRFTimeAnnotator
org.apache.ctakes.temporal.ae.
MetaTimeAnnotator
org.apache.ctakes.temporal.ae.
TimexAdmissionTimeAnnotator
org.apache.ctakes.temporal.ae.
TimexDischargeTimeAnnotator
org.apache.ctakes.ytex.kernel.
AbstractBagOfWordsExporter
org.apache.ctakes.ytex.weka.
WekaBagOfWordsExporterImpl
(implements org.apache.ctakes.ytex.weka.
WekaBagOfWordsExporter
)
org.apache.ctakes.ytex.weka.
GramMatrixExporterImpl
(implements org.apache.ctakes.ytex.weka.
GramMatrixExporter
)
org.apache.ctakes.dictionary.lookup.
AbstractBaseDictionary
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.jdbc.
JdbcDictionaryImpl
org.apache.ctakes.dictionary.lookup.lucene.
LuceneDictionaryImpl
org.apache.ctakes.dictionary.lookup.strtable.
StringTableDictionaryImpl
org.apache.ctakes.dictionary.lookup.
AbstractBaseMetaDataHit
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.dictionary.lookup.
GenericMetaDataHitImpl
org.apache.ctakes.dictionary.lookup.lucene.
LuceneDocumentMetaDataHitImpl
org.apache.ctakes.dictionary.lookup.strtable.
StringTableRowMetaDataHitImpl
org.apache.ctakes.coreference.util.
AbstractClassifier
java.util.AbstractCollection<E> (implements java.util.Collection<E>)
java.util.AbstractList<E> (implements java.util.List<E>)
java.util.AbstractSequentialList<E>
java.util.LinkedList<E> (implements java.lang.Cloneable, java.util.Deque<E>, java.util.List<E>, java.io.Serializable)
org.apache.ctakes.dependency.parser.util.
DependencyPath
java.util.Vector<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
org.apache.ctakes.utils.xcas_comparison.
XcasAnnotation.MyVector
(implements java.lang.Cloneable)
org.apache.ctakes.dictionary.lookup2.concept.
AbstractConceptFactory
(implements org.apache.ctakes.dictionary.lookup2.concept.
ConceptFactory
)
org.apache.ctakes.dictionary.lookup2.concept.
JdbcConceptFactory
org.apache.ctakes.dictionary.lookup2.concept.
MemConceptFactory
org.apache.ctakes.core.cc.
AbstractJdbcWriter.TableSqlInfo
java.util.AbstractMap<K,V> (implements java.util.Map<K,V>)
java.util.HashMap<K,V> (implements java.lang.Cloneable, java.util.Map<K,V>, java.io.Serializable)
org.apache.ctakes.utils.struct.
CounterMap
<K>
org.apache.ctakes.assertion.util.
SemanticClasses
org.apache.ctakes.dictionary.lookup2.dictionary.
AbstractRareWordDictionary
(implements org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordDictionary
)
org.apache.ctakes.dictionary.lookup2.dictionary.
JdbcRareWordDictionary
org.apache.ctakes.dictionary.lookup2.dictionary.
MemRareWordDictionary
org.apache.ctakes.dictionary.lookup2.consumer.
AbstractTermConsumer
(implements org.apache.ctakes.dictionary.lookup2.consumer.
TermConsumer
)
org.apache.ctakes.dictionary.lookup2.consumer.
DefaultTermConsumer
org.apache.ctakes.dictionary.lookup2.consumer.
PrecisionTermConsumer
org.apache.ctakes.dictionary.lookup2.consumer.
SemanticCleanupTermConsumer
org.apache.ctakes.ytex.uima.mapper.
AnnoMappingInfo
Annotation
org.apache.ctakes.assertion.medfacts.types.
Concept
Annotation
org.apache.ctakes.assertion.medfacts.types.
Assertion
Annotation
org.apache.ctakes.assertion.zoner.types.
Zone
Annotation
org.apache.ctakes.assertion.zoner.types.
Subzone
Annotation
org.apache.ctakes.assertion.zoner.types.
Heading
Annotation
org.apache.ctakes.constituency.parser.uima.type.
BooleanLabeledTree
Annotation
org.apache.ctakes.coreference.type.
Markable
org.apache.ctakes.coreference.type.
DemMarkable
org.apache.ctakes.coreference.type.
NEMarkable
org.apache.ctakes.coreference.type.
PronounMarkable
Annotation
org.apache.ctakes.coreference.type.
MarkablePairSet
Annotation
org.apache.ctakes.drugner.type.
SuffixStrengthAnnotation
Annotation
org.apache.ctakes.drugner.type.
SubSectionAnnotation
Annotation
org.apache.ctakes.drugner.type.
StrengthUnitAnnotation
Annotation
org.apache.ctakes.drugner.type.
StrengthAnnotation
Annotation
org.apache.ctakes.drugner.type.
RouteAnnotation
Annotation
org.apache.ctakes.drugner.type.
RangeStrengthAnnotation
Annotation
org.apache.ctakes.drugner.type.
FrequencyUnitAnnotation
Annotation
org.apache.ctakes.drugner.type.
FrequencyAnnotation
Annotation
org.apache.ctakes.drugner.type.
FractionStrengthAnnotation
Annotation
org.apache.ctakes.drugner.type.
FormAnnotation
Annotation
org.apache.ctakes.drugner.type.
DurationAnnotation
Annotation
org.apache.ctakes.drugner.type.
DrugMentionAnnotation
Annotation
org.apache.ctakes.drugner.type.
DrugChangeStatusAnnotation
Annotation
org.apache.ctakes.drugner.type.
DosagesAnnotation
Annotation
org.apache.ctakes.drugner.type.
DecimalStrengthAnnotation
Annotation
org.apache.ctakes.drugner.type.
ChunkAnnotation
Annotation
org.apache.ctakes.typesystem.type.textspan.
Sentence
Annotation
org.apache.ctakes.typesystem.type.textspan.
Segment
Annotation
org.apache.ctakes.typesystem.type.textspan.
Paragraph
Annotation
org.apache.ctakes.typesystem.type.textspan.
LookupWindowAnnotation
Annotation
org.apache.ctakes.typesystem.type.textspan.
List
Annotation
org.apache.ctakes.typesystem.type.textspan.
DrugLookupWindowAnnotation
org.apache.ctakes.preprocessor.
Annotation
Annotation
org.apache.ctakes.sideeffect.type.
SideEffectAnnotation
Annotation
org.apache.ctakes.sideeffect.type.
SESentence
Annotation
org.apache.ctakes.sideeffect.type.
PSESentenceFeature
Annotation
org.apache.ctakes.sideeffect.type.
PSESentence
Annotation
org.apache.ctakes.typesystem.type.syntax.
BaseToken
org.apache.ctakes.typesystem.type.syntax.
ContractionToken
org.apache.ctakes.typesystem.type.syntax.
NewlineToken
org.apache.ctakes.typesystem.type.syntax.
NumToken
org.apache.ctakes.typesystem.type.syntax.
PunctuationToken
org.apache.ctakes.typesystem.type.syntax.
SymbolToken
org.apache.ctakes.typesystem.type.syntax.
WordToken
Annotation
org.apache.ctakes.typesystem.type.syntax.
Chunk
org.apache.ctakes.typesystem.type.syntax.
ADJP
org.apache.ctakes.typesystem.type.syntax.
ADVP
org.apache.ctakes.typesystem.type.syntax.
CONJP
org.apache.ctakes.typesystem.type.syntax.
INTJ
org.apache.ctakes.typesystem.type.syntax.
LST
org.apache.ctakes.typesystem.type.syntax.
NP
org.apache.ctakes.typesystem.type.syntax.
O
org.apache.ctakes.typesystem.type.syntax.
PP
org.apache.ctakes.typesystem.type.syntax.
PRT
org.apache.ctakes.typesystem.type.syntax.
SBAR
org.apache.ctakes.typesystem.type.syntax.
UCP
org.apache.ctakes.typesystem.type.syntax.
VP
Annotation
org.apache.ctakes.typesystem.type.syntax.
TreebankNode
org.apache.ctakes.typesystem.type.syntax.
TerminalTreebankNode
org.apache.ctakes.typesystem.type.syntax.
TopTreebankNode
Annotation
org.apache.ctakes.typesystem.type.syntax.
ConllDependencyNode
Annotation
org.apache.ctakes.typesystem.type.temporary.assertion.
AssertionCuePhraseAnnotation
Annotation
org.apache.ctakes.typesystem.type.textsem.
IdentifiedAnnotation
org.apache.ctakes.typesystem.type.textsem.
ContextAnnotation
org.apache.ctakes.typesystem.type.textsem.
DateAnnotation
org.apache.ctakes.typesystem.type.textsem.
EntityMention
org.apache.ctakes.typesystem.type.textsem.
AnatomicalSiteMention
org.apache.ctakes.typesystem.type.textsem.
EventMention
org.apache.ctakes.typesystem.type.textsem.
DiseaseDisorderMention
org.apache.ctakes.typesystem.type.textsem.
LabMention
org.apache.ctakes.typesystem.type.textsem.
MedicationEventMention
org.apache.ctakes.typesystem.type.textsem.
MedicationMention
org.apache.ctakes.typesystem.type.textsem.
ProcedureMention
org.apache.ctakes.typesystem.type.textsem.
SignSymptomMention
org.apache.ctakes.typesystem.type.textsem.
FractionAnnotation
org.apache.ctakes.typesystem.type.textsem.
Markable
org.apache.ctakes.typesystem.type.textsem.
MeasurementAnnotation
org.apache.ctakes.typesystem.type.textsem.
Modifier
org.apache.ctakes.typesystem.type.textsem.
BodyLateralityModifier
org.apache.ctakes.typesystem.type.textsem.
BodySideModifier
org.apache.ctakes.typesystem.type.textsem.
ConditionalModifier
org.apache.ctakes.typesystem.type.textsem.
CourseModifier
org.apache.ctakes.typesystem.type.textsem.
GenericModifier
org.apache.ctakes.typesystem.type.textsem.
HistoryOfModifier
org.apache.ctakes.typesystem.type.textsem.
LabDeltaFlagModifier
org.apache.ctakes.typesystem.type.textsem.
LabEstimatedModifier
org.apache.ctakes.typesystem.type.textsem.
LabInterpretationModifier
org.apache.ctakes.typesystem.type.textsem.
LabReferenceRangeModifier
org.apache.ctakes.typesystem.type.textsem.
LabValueModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationAllergyModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationDosageModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationDurationModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationFormModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationFrequencyModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationRouteModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationStatusChangeModifier
org.apache.ctakes.typesystem.type.textsem.
MedicationStrengthModifier
org.apache.ctakes.typesystem.type.textsem.
PolarityModifier
org.apache.ctakes.typesystem.type.textsem.
ProcedureDeviceModifier
org.apache.ctakes.typesystem.type.textsem.
ProcedureMethodModifier
org.apache.ctakes.typesystem.type.textsem.
SeverityModifier
org.apache.ctakes.typesystem.type.textsem.
SubjectModifier
org.apache.ctakes.typesystem.type.textsem.
UncertaintyModifier
org.apache.ctakes.smokingstatus.type.
NonSmokerNamedEntityAnnotation
org.apache.ctakes.typesystem.type.textsem.
PersonTitleAnnotation
org.apache.ctakes.typesystem.type.textsem.
RangeAnnotation
org.apache.ctakes.typesystem.type.textsem.
RomanNumeralAnnotation
org.apache.ctakes.smokingstatus.type.
SmokerNamedEntityAnnotation
org.apache.ctakes.typesystem.type.textsem.
TimeAnnotation
org.apache.ctakes.typesystem.type.textsem.
TimeMention
org.apache.ctakes.smokingstatus.type.
UnknownSmokerNamedEntityAnnotation
Annotation
org.apache.ctakes.typesystem.type.textsem.
SemanticArgument
Annotation
org.apache.ctakes.typesystem.type.textsem.
Predicate
Annotation
org.apache.ctakes.smokingstatus.i2b2.type.
RecordSentence
Annotation
org.apache.ctakes.smokingstatus.type.libsvm.
AttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
DateAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
NominalAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
NumericAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
StringAttributeValue
Annotation
org.apache.ctakes.smokingstatus.type.libsvm.
DocumentID
Annotation
org.apache.ctakes.smokingstatus.type.
SmokingDocumentClassification
Annotation
org.apache.ctakes.ytex.uima.types.
DocKey
Annotation
org.apache.ctakes.ytex.uima.types.
Date
Annotation_Type
org.apache.ctakes.assertion.medfacts.types.
Concept_Type
Annotation_Type
org.apache.ctakes.assertion.medfacts.types.
Assertion_Type
Annotation_Type
org.apache.ctakes.assertion.zoner.types.
Zone_Type
Annotation_Type
org.apache.ctakes.assertion.zoner.types.
Subzone_Type
Annotation_Type
org.apache.ctakes.assertion.zoner.types.
Heading_Type
Annotation_Type
org.apache.ctakes.constituency.parser.uima.type.
BooleanLabeledTree_Type
Annotation_Type
org.apache.ctakes.coreference.type.
Markable_Type
org.apache.ctakes.coreference.type.
DemMarkable_Type
org.apache.ctakes.coreference.type.
NEMarkable_Type
org.apache.ctakes.coreference.type.
PronounMarkable_Type
Annotation_Type
org.apache.ctakes.coreference.type.
MarkablePairSet_Type
Annotation_Type
org.apache.ctakes.drugner.type.
SuffixStrengthAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
SubSectionAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
StrengthUnitAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
StrengthAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
RouteAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
RangeStrengthAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
FrequencyUnitAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
FrequencyAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
FractionStrengthAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
FormAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
DurationAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
DrugMentionAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
DrugChangeStatusAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
DosagesAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
DecimalStrengthAnnotation_Type
Annotation_Type
org.apache.ctakes.drugner.type.
ChunkAnnotation_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
Sentence_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
Segment_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
Paragraph_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
LookupWindowAnnotation_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
List_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textspan.
DrugLookupWindowAnnotation_Type
Annotation_Type
org.apache.ctakes.sideeffect.type.
SideEffectAnnotation_Type
Annotation_Type
org.apache.ctakes.sideeffect.type.
SESentence_Type
Annotation_Type
org.apache.ctakes.sideeffect.type.
PSESentenceFeature_Type
Annotation_Type
org.apache.ctakes.sideeffect.type.
PSESentence_Type
Annotation_Type
org.apache.ctakes.typesystem.type.syntax.
BaseToken_Type
org.apache.ctakes.typesystem.type.syntax.
ContractionToken_Type
org.apache.ctakes.typesystem.type.syntax.
NewlineToken_Type
org.apache.ctakes.typesystem.type.syntax.
NumToken_Type
org.apache.ctakes.typesystem.type.syntax.
PunctuationToken_Type
org.apache.ctakes.typesystem.type.syntax.
SymbolToken_Type
org.apache.ctakes.typesystem.type.syntax.
WordToken_Type
Annotation_Type
org.apache.ctakes.typesystem.type.syntax.
Chunk_Type
org.apache.ctakes.typesystem.type.syntax.
ADJP_Type
org.apache.ctakes.typesystem.type.syntax.
ADVP_Type
org.apache.ctakes.typesystem.type.syntax.
CONJP_Type
org.apache.ctakes.typesystem.type.syntax.
INTJ_Type
org.apache.ctakes.typesystem.type.syntax.
LST_Type
org.apache.ctakes.typesystem.type.syntax.
NP_Type
org.apache.ctakes.typesystem.type.syntax.
O_Type
org.apache.ctakes.typesystem.type.syntax.
PP_Type
org.apache.ctakes.typesystem.type.syntax.
PRT_Type
org.apache.ctakes.typesystem.type.syntax.
SBAR_Type
org.apache.ctakes.typesystem.type.syntax.
UCP_Type
org.apache.ctakes.typesystem.type.syntax.
VP_Type
Annotation_Type
org.apache.ctakes.typesystem.type.syntax.
TreebankNode_Type
org.apache.ctakes.typesystem.type.syntax.
TerminalTreebankNode_Type
org.apache.ctakes.typesystem.type.syntax.
TopTreebankNode_Type
Annotation_Type
org.apache.ctakes.typesystem.type.syntax.
ConllDependencyNode_Type
Annotation_Type
org.apache.ctakes.typesystem.type.temporary.assertion.
AssertionCuePhraseAnnotation_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textsem.
IdentifiedAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
ContextAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
DateAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
EntityMention_Type
org.apache.ctakes.typesystem.type.textsem.
AnatomicalSiteMention_Type
org.apache.ctakes.typesystem.type.textsem.
EventMention_Type
org.apache.ctakes.typesystem.type.textsem.
DiseaseDisorderMention_Type
org.apache.ctakes.typesystem.type.textsem.
LabMention_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationEventMention_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationMention_Type
org.apache.ctakes.typesystem.type.textsem.
ProcedureMention_Type
org.apache.ctakes.typesystem.type.textsem.
SignSymptomMention_Type
org.apache.ctakes.typesystem.type.textsem.
FractionAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
Markable_Type
org.apache.ctakes.typesystem.type.textsem.
MeasurementAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
Modifier_Type
org.apache.ctakes.typesystem.type.textsem.
BodyLateralityModifier_Type
org.apache.ctakes.typesystem.type.textsem.
BodySideModifier_Type
org.apache.ctakes.typesystem.type.textsem.
ConditionalModifier_Type
org.apache.ctakes.typesystem.type.textsem.
CourseModifier_Type
org.apache.ctakes.typesystem.type.textsem.
GenericModifier_Type
org.apache.ctakes.typesystem.type.textsem.
HistoryOfModifier_Type
org.apache.ctakes.typesystem.type.textsem.
LabDeltaFlagModifier_Type
org.apache.ctakes.typesystem.type.textsem.
LabEstimatedModifier_Type
org.apache.ctakes.typesystem.type.textsem.
LabInterpretationModifier_Type
org.apache.ctakes.typesystem.type.textsem.
LabReferenceRangeModifier_Type
org.apache.ctakes.typesystem.type.textsem.
LabValueModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationAllergyModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationDosageModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationDurationModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationFormModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationFrequencyModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationRouteModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationStatusChangeModifier_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationStrengthModifier_Type
org.apache.ctakes.typesystem.type.textsem.
PolarityModifier_Type
org.apache.ctakes.typesystem.type.textsem.
ProcedureDeviceModifier_Type
org.apache.ctakes.typesystem.type.textsem.
ProcedureMethodModifier_Type
org.apache.ctakes.typesystem.type.textsem.
SeverityModifier_Type
org.apache.ctakes.typesystem.type.textsem.
SubjectModifier_Type
org.apache.ctakes.typesystem.type.textsem.
UncertaintyModifier_Type
org.apache.ctakes.smokingstatus.type.
NonSmokerNamedEntityAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
PersonTitleAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
RangeAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
RomanNumeralAnnotation_Type
org.apache.ctakes.smokingstatus.type.
SmokerNamedEntityAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
TimeAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
TimeMention_Type
org.apache.ctakes.smokingstatus.type.
UnknownSmokerNamedEntityAnnotation_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textsem.
SemanticArgument_Type
Annotation_Type
org.apache.ctakes.typesystem.type.textsem.
Predicate_Type
Annotation_Type
org.apache.ctakes.smokingstatus.i2b2.type.
RecordSentence_Type
Annotation_Type
org.apache.ctakes.smokingstatus.type.libsvm.
AttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
DateAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
NominalAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
NumericAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
StringAttributeValue_Type
Annotation_Type
org.apache.ctakes.smokingstatus.type.libsvm.
DocumentID_Type
Annotation_Type
org.apache.ctakes.smokingstatus.type.
SmokingDocumentClassification_Type
Annotation_Type
org.apache.ctakes.ytex.uima.types.
DocKey_Type
Annotation_Type
org.apache.ctakes.ytex.uima.types.
Date_Type
org.apache.ctakes.ytex.uima.model.
AnnotationContainmentLink
(implements java.io.Serializable)
org.apache.ctakes.coreference.util.
AnnotationCounter
org.apache.ctakes.dependency.parser.util.
AnnotationDepUtils
org.apache.ctakes.temporal.utils.
AnnotationIdCollection
org.apache.ctakes.coreference.util.
AnnotationSelector
org.apache.ctakes.assertion.eval.
AnnotationStatisticsCompact
<OUTCOME_TYPE> (implements java.io.Serializable)
org.apache.ctakes.assertion.eval.
AnnotationStatisticsCompact.Span
org.apache.ctakes.constituency.parser.util.
AnnotationTreeUtils
org.apache.ctakes.coreference.util.
AnnotOffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.jdl.
App
org.apache.ctakes.jdl.
AppJdl
org.apache.ctakes.ytex.uima.
ApplicationContextHolder
org.apache.ctakes.jdl.
AppMain
org.apache.ctakes.utils.wiki.
ApproximateMath
org.apache.ctakes.assertion.cr.
ArgumentInfo
org.apache.ctakes.relationextractor.knowtator.
ArgumentInfo
org.apache.ctakes.relationextractor.ae.features.
ArgumentOrderFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dictionary.lookup2.util.collection.
ArrayListMap
<K,V> (implements org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T>)
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
AssertionAboveLeftTreeExtractor
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionComponents
org.apache.ctakes.assertion.util.
AssertionConst
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
AssertionDependencyTreeExtractor
org.apache.ctakes.assertion.util.
AssertionDepUtils
org.apache.ctakes.assertion.eval.
AssertionEvaluation.HashableAnnotation
(implements java.lang.Comparable<T>)
org.apache.ctakes.assertion.eval.
AssertionEvaluation.Options
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionSampleFeatureGenerator
org.apache.ctakes.assertion.util.
AssertionTreeUtils
org.apache.ctakes.drugner.elements.
AssociatedCodeElement
org.apache.ctakes.drugner.elements.
AssociatedPrimaryCodeElement
org.apache.ctakes.drugner.elements.
AssociatedSecondaryCodeElement
org.apache.ctakes.coreference.util.
AttributeCalculator
org.apache.ctakes.coreference.util.
AnaphoricityAttributeCalculator
org.apache.ctakes.coreference.util.
PairAttributeCalculator
org.apache.ctakes.coreference.util.
SyntaxAttributeCalculator
org.apache.ctakes.ytex.kernel.evaluator.
AttributeProductKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.clinicalpipeline.runtime.
BagOfAnnotationsGenerator
<T,K>
org.apache.ctakes.clinicalpipeline.runtime.
BagOfCUIsGenerator
org.apache.ctakes.ytex.kernel.
BagOfWordsData
org.apache.ctakes.ytex.kernel.
BaseClassifierEvaluationParser
(implements org.apache.ctakes.ytex.kernel.
ClassifierEvaluationParser
)
org.apache.ctakes.ytex.libsvm.
LibSVMParser
org.apache.ctakes.ytex.svmlight.
SVMLightParser
org.apache.ctakes.ytex.semil.
SemiLEvaluationParser
org.apache.ctakes.ytex.kernel.
SvmlinEvaluationParser
org.apache.ctakes.ytex.kernel.
BaseClassifierEvaluationParser.InstanceClassInfo
org.apache.ctakes.dictionary.lookup.
BaseDictionaryImpl
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.ae.
BaseLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
AssertionCuePhraseConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
NamedEntityLookupConsumerImpl
org.apache.ctakes.smokingstatus.lookup.ae.
NonSmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
OrangeBookFilterConsumerImpl
org.apache.ctakes.smokingstatus.lookup.ae.
SmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedConsumerImpl
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedDbConsumerImpl
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedLuceneConsumerImpl
org.apache.ctakes.smokingstatus.lookup.ae.
UnknownSmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
BaseLookupConsumerImpl.LookupHitKey
org.apache.ctakes.dictionary.lookup.
BaseMetaDataHitImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.ytex.kernel.metric.
BaseSimilarityMetric
(implements org.apache.ctakes.ytex.kernel.metric.
SimilarityMetric
)
org.apache.ctakes.ytex.kernel.metric.
IntrinsicLCHMetric
org.apache.ctakes.ytex.kernel.metric.
IntrinsicPathMetric
org.apache.ctakes.ytex.kernel.metric.
IntrinsicRadaMetric
org.apache.ctakes.ytex.kernel.metric.
JaccardMetric
org.apache.ctakes.ytex.kernel.metric.
LCHMetric
org.apache.ctakes.ytex.kernel.metric.
LinMetric
org.apache.ctakes.ytex.kernel.metric.
PageRankMetric
org.apache.ctakes.ytex.kernel.metric.
PathMetric
org.apache.ctakes.ytex.kernel.metric.
RadaMetric
org.apache.ctakes.ytex.kernel.metric.
SokalSneathMetric
org.apache.ctakes.ytex.kernel.metric.
WuPalmerMetric
org.apache.ctakes.ytex.kernel.
BaseSparseDataFormatter
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatter
)
org.apache.ctakes.ytex.libsvm.
LibSVMFormatterFactory.LibSVMFormatter
org.apache.ctakes.ytex.sparsematrix.
SparseMatrixFormatterFactory.SparseMatrixDataFormatter
org.apache.ctakes.ytex.svmlight.
SVMLightFormatterFactory.SVMLightFormatter
org.apache.ctakes.ytex.semil.
SemiLFormatterFactory.SemiLDataFormatter
org.apache.ctakes.ytex.svmlight.
SGTFormatterFactory.SGTFormatter
org.apache.ctakes.ytex.kernel.
SVMLinFormatterFactory.SVMLinDataFormatter
org.apache.ctakes.ytex.weka.
WekaFormatterFactory.WekaFormatter
org.apache.ctakes.ytex.weka.
WekaAttributeEvaluatorImpl.WekaAttributeEvaluatorFormatter
org.apache.ctakes.core.fsm.adapters.
BaseTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.core.fsm.adapters.
CharacterTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
CharacterToken
)
org.apache.ctakes.core.fsm.adapters.
NewlineTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
EolToken
)
org.apache.ctakes.core.fsm.adapters.
PunctuationTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
PunctuationToken
)
org.apache.ctakes.core.fsm.adapters.
SymbolTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
SymbolToken
)
org.apache.ctakes.core.fsm.adapters.
ContractionTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
ContractionToken
)
org.apache.ctakes.core.fsm.adapters.
NumberTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
NumberToken
)
org.apache.ctakes.core.fsm.adapters.
DecimalTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
DecimalToken
)
org.apache.ctakes.core.fsm.adapters.
IntegerTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
IntegerToken
)
org.apache.ctakes.core.fsm.adapters.
TextTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
TextToken
)
org.apache.ctakes.core.fsm.adapters.
WordTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
WordToken
)
org.apache.ctakes.core.fsm.token.adapter.
BaseTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.core.fsm.token.adapter.
CharacterTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
CharacterToken
)
org.apache.ctakes.core.fsm.token.adapter.
PunctuationTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
PunctuationToken
)
org.apache.ctakes.core.fsm.token.adapter.
NumberTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
NumberToken
)
org.apache.ctakes.core.fsm.token.adapter.
DecimalTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
DecimalToken
)
org.apache.ctakes.core.fsm.token.adapter.
IntegerTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
IntegerToken
)
org.apache.ctakes.core.fsm.token.adapter.
WordTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
WordToken
)
org.apache.ctakes.core.fsm.output.
BaseTokenImpl
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.necontexts.
ContextHit
org.apache.ctakes.core.fsm.output.
DateToken
org.apache.ctakes.core.fsm.output.
FractionToken
org.apache.ctakes.core.fsm.output.
MeasurementToken
org.apache.ctakes.core.fsm.output.
NegationIndicator
org.apache.ctakes.drugner.fsm.output.util.
NonIndicator
org.apache.ctakes.core.fsm.output.
PersonTitleToken
org.apache.ctakes.core.fsm.output.
RangeToken
org.apache.ctakes.core.fsm.output.
RomanNumeralToken
org.apache.ctakes.core.fsm.output.
StatusIndicator
org.apache.ctakes.drugner.fsm.output.util.
SubSectionIndicator
org.apache.ctakes.core.fsm.output.
TimeToken
org.apache.ctakes.drugner.fsm.output.elements.
BaseTokenImpl
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.drugner.fsm.output.elements.
AssociatedCodeToken
org.apache.ctakes.drugner.fsm.output.elements.
ConfidenceScoreToken
org.apache.ctakes.drugner.fsm.output.util.
DecimalStrengthToken
org.apache.ctakes.drugner.fsm.output.elements.
DosageToken
org.apache.ctakes.drugner.fsm.output.elements.
DrugChangeStatusToken
org.apache.ctakes.drugner.fsm.output.elements.
DurationToken
org.apache.ctakes.drugner.fsm.output.elements.
FormToken
org.apache.ctakes.drugner.fsm.output.util.
FractionStrengthToken
org.apache.ctakes.drugner.fsm.output.util.
FractionToken
org.apache.ctakes.drugner.fsm.output.elements.
FrequencyToken
org.apache.ctakes.drugner.fsm.output.elements.
FrequencyUnitToken
org.apache.ctakes.drugner.fsm.output.util.
HyphenatedDrugToken
org.apache.ctakes.drugner.fsm.output.util.
RangeStrengthToken
org.apache.ctakes.drugner.fsm.output.util.
RangeToken
org.apache.ctakes.drugner.fsm.output.elements.
RouteToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthUnitCombinedToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthUnitToken
org.apache.ctakes.drugner.fsm.output.util.
SuffixFrequencyToken
org.apache.ctakes.drugner.fsm.output.util.
SuffixStrengthToken
org.apache.ctakes.temporal.ae.feature.selection.
BinaryAlphaFeatureSelection.AlphaScorer
<OUTCOME_T>
org.apache.ctakes.ytex.uima.model.
BooleanUtil
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
BrownClusterFeatureFunction
org.apache.ctakes.dictionary.lookup2.concept.
BsvConceptFactory
(implements org.apache.ctakes.dictionary.lookup2.concept.
ConceptFactory
)
org.apache.ctakes.dictionary.lookup2.concept.
BsvConceptFactory.CuiTuiTerm
org.apache.ctakes.dictionary.lookup2.dictionary.
BsvRareWordDictionary
(implements org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordDictionary
)
org.apache.ctakes.utils.build.
BuildPear
org.apache.ctakes.utils.build.
BuildPipelinePears
org.apache.ctakes.utils.wiki.
Cache
org.apache.ctakes.ytex.kernel.evaluator.
CacheKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.ytex.kernel.evaluator.
ProductKernel
org.apache.ctakes.ytex.kernel.evaluator.
SemanticSimKernel
org.apache.ctakes.ytex.kernel.evaluator.
LinKernel
org.apache.ctakes.ytex.kernel.evaluator.
SemanticTypeKernel
org.apache.ctakes.ytex.kernel.evaluator.
SumKernel
CasConsumer_ImplBase
org.apache.ctakes.constituency.parser.uima.co.
ParserTreeWriterConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
XmiWriterCasConsumerCtakes
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
TokenOffsetsCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
TokenFreqCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
SentenceTokensPrinter
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
NormalizedFilesInDirectoryCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
AbstractJdbcWriter
org.apache.ctakes.core.cc.
JdbcWriterTemplate
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
HtmlTableCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
FilesInDirectoryCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.core.cc.
CasConsumer
CasConsumer_ImplBase
org.apache.ctakes.dependency.parser.
DependencyNodeWriter
CasConsumer_ImplBase
org.apache.ctakes.drugner.cc.
ConsumeNamedEntityRecordModel
CasConsumer_ImplBase
org.apache.ctakes.sideeffect.cc.
SideEffectSentenceCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.sideeffect.cc.
SideEffectCasConsumer
CasConsumer_ImplBase
org.apache.ctakes.smokingstatus.cc.
RecordResolutionCasConsumer
org.apache.ctakes.core.cc.
CASConsumerTestDriver
org.apache.ctakes.assertion.medfacts.
CasIndexer
<T>
org.apache.ctakes.relationextractor.data.
CategoricalDistribution
org.apache.ctakes.assertion.medfacts.i2b2.api.
CharacterOffsetToLineTokenConverterCtakesImpl
org.apache.ctakes.temporal.utils.
CheckKnowtatorAnnotations
org.apache.ctakes.temporal.ae.feature.
CheckSpecialWordRelationExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.assertion.attributes.features.selection.
Chi2FeatureSelection.Chi2Scorer
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
Chi2FeatureSelection.Chi2Scorer
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.
ChunkingExtractor
org.apache.ctakes.smokingstatus.util.
ClassifiableEntry
org.apache.ctakes.ytex.kernel.model.
ClassifierEvaluation
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
SemiLClassifierEvaluation
org.apache.ctakes.ytex.kernel.model.
SVMClassifierEvaluation
org.apache.ctakes.ytex.kernel.dao.
ClassifierEvaluationDaoImpl
(implements org.apache.ctakes.ytex.kernel.dao.
ClassifierEvaluationDao
)
org.apache.ctakes.ytex.kernel.
ClassifierEvaluationImporter
org.apache.ctakes.ytex.kernel.model.
ClassifierEvaluationIRStat
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.
ClassifierEvaluationResult
org.apache.ctakes.ytex.kernel.
ClassifierEvaluationResults
org.apache.ctakes.ytex.kernel.
ClassifierEvalUtil
org.apache.ctakes.ytex.kernel.model.
ClassifierInstanceEvaluation
(implements java.io.Serializable)
org.apache.ctakes.clinicalpipeline.
ClinicalPipelineFactory
org.apache.ctakes.clinicalpipeline.
ClinicalPipelineWithUmls
org.apache.ctakes.temporal.ae.feature.
ClosestVerbExtractor
org.apache.ctakes.core.cpe.
CmdLineCpeRunner
org.apache.ctakes.core.cpe.
CmdLineCpeRunner.MyStatusCallbackListener
org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionCreatorFactory
CollectionReader_ImplBase
org.apache.ctakes.assertion.cr.
XmiCollectionReaderCtakes
CollectionReader_ImplBase
org.apache.ctakes.assertion.cr.
NegExCorpusReader
CollectionReader_ImplBase
org.apache.ctakes.assertion.cr.
I2B2Challenge2010CollectionReader
CollectionReader_ImplBase
org.apache.ctakes.core.cr.
XmiCollectionReaderCtakes
CollectionReader_ImplBase
org.apache.ctakes.core.cr.
LinesFromFileCollectionReader
CollectionReader_ImplBase
org.apache.ctakes.core.cr.
JdbcCollectionReader
CollectionReader_ImplBase
org.apache.ctakes.core.cr.
FilesInDirectoryCollectionReader
org.apache.ctakes.core.cr.
FilesInDirectoryCollectionCyclicalReads
CollectionReader_ImplBase
org.apache.ctakes.dependency.parser.cr.
DependencyFileCollectionReader
CollectionReader_ImplBase
org.apache.ctakes.postagger.
OpenNLPPOSCollectionReader
CollectionReader_ImplBase
org.apache.ctakes.ytex.uima.
DBCollectionReader
org.apache.ctakes.ytex.uima.mapper.
ColumnMappingInfo
org.apache.ctakes.temporal.eval.
CommandLine
org.apache.ctakes.temporal.eval.
CommandLine.IntegerRanges
org.apache.ctakes.constituency.parser.util.
CommandLineParserUtil
org.apache.ctakes.utils.xcas_comparison.
Compare
org.apache.ctakes.temporal.data.analysis.
CompareFeatureStructures
org.apache.ctakes.temporal.data.analysis.
CompareFeatureStructures.FeatureStructureEqualizer
java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
java.awt.Container
javax.swing.JComponent (implements java.io.Serializable)
javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
org.apache.ctakes.ytex.tools.docanalyzer.
DBAnnotationViewerDialog.MyListCellRenderer
(implements javax.swing.ListCellRenderer<E>)
java.awt.Window (implements javax.accessibility.Accessible)
java.awt.Dialog
javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
org.apache.ctakes.ytex.tools.docanalyzer.
DBAnnotationViewerDialog
(implements java.awt.event.ActionListener)
java.awt.Frame (implements java.awt.MenuContainer)
javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
org.apache.ctakes.ytex.tools.
DBAnnotationViewerMain
org.apache.ctakes.dictionary.lookup2.concept.
Concept
org.apache.ctakes.ytex.kernel.dao.
ConceptDaoImpl
(implements org.apache.ctakes.ytex.kernel.dao.
ConceptDao
)
org.apache.ctakes.ytex.web.search.
ConceptFirstWord
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
ConceptGraph
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.metric.
ConceptInfo
org.apache.ctakes.assertion.medfacts.
ConceptLookup
org.apache.ctakes.ytex.web.search.
ConceptLookupBean
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.metric.
ConceptPair
(implements java.lang.Comparable<T>, java.io.Serializable)
org.apache.ctakes.ytex.kernel.metric.
ConceptPairSimilarity
(implements java.io.Serializable)
org.apache.ctakes.ytex.web.search.
ConceptSearchServiceImpl
(implements org.apache.ctakes.ytex.web.search.
ConceptSearchService
)
org.apache.ctakes.ytex.web.search.
ConceptSearchServiceImpl.ConceptFirstWordRowMapper
org.apache.ctakes.ytex.kernel.metric.
ConceptSimilarityServiceImpl
(implements org.apache.ctakes.ytex.kernel.metric.
ConceptSimilarityService
)
org.apache.ctakes.ytex.ws.
ConceptSimilarityWebServiceImpl
(implements org.apache.ctakes.ytex.ws.
ConceptSimilarityRestService
, org.apache.ctakes.ytex.ws.
ConceptSimilarityWebService
)
org.apache.ctakes.ytex.kernel.model.
ConcRel
(implements java.io.Serializable)
Condition
org.apache.ctakes.core.fsm.condition.
WordValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
WordSetCondition
Condition
org.apache.ctakes.core.fsm.condition.
TextValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
TextSetCondition
Condition
org.apache.ctakes.core.fsm.condition.
SymbolValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
RomanNumeralCondition
Condition
org.apache.ctakes.core.fsm.condition.
RangeCondition
Condition
org.apache.ctakes.core.fsm.condition.
PunctuationValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
NumberCondition
Condition
org.apache.ctakes.core.fsm.condition.
NegateCondition
Condition
org.apache.ctakes.core.fsm.condition.
IntegerValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
IntegerRangeCondition
Condition
org.apache.ctakes.core.fsm.condition.
IntegerCondition
Condition
org.apache.ctakes.core.fsm.condition.
HourMinuteCondition
Condition
org.apache.ctakes.core.fsm.condition.
DisjoinCondition
Condition
org.apache.ctakes.core.fsm.condition.
DecimalValueCondition
Condition
org.apache.ctakes.core.fsm.condition.
DecimalRangeCondition
Condition
org.apache.ctakes.core.fsm.condition.
DecimalCondition
Condition
org.apache.ctakes.core.fsm.condition.
DayNightWordCondition
Condition
org.apache.ctakes.core.fsm.condition.
CombineCondition
Condition
org.apache.ctakes.core.fsm.machine.
RomanNumeralFSM.RomanNumeralCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
TimeCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthUnitCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthUnitCombinedCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
RouteCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
RangeStrengthCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
RangeDosageCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
FrequencyUnitCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
FractionStrengthCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
FractionCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
FormCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
DrugChangeStatusCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
DosageCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
DecimalStrengthStatusCondition
Condition
org.apache.ctakes.drugner.fsm.elements.conditions.
ContainsSetTextValueCondition
org.apache.ctakes.drugner.elements.
ConfidenceScoreElement
org.apache.ctakes.temporal.ae.feature.
ConjunctionRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.utils.xcas_comparison.
Const
org.apache.ctakes.typesystem.type.constants.
CONST
org.apache.ctakes.relationextractor.data.
Constants
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructor
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructorFindContainedBy
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructorFindContainedWithin
org.apache.ctakes.necontexts.
ContextAnalyzerAdapter
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.drugner.ae.impl.
NegContextInitializerImpl
org.apache.ctakes.necontexts.
ContextHitConsumerAdapter
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
ContextWordWindowExtractor
org.apache.ctakes.core.nlp.tokenizer.
ContractionResult
org.apache.ctakes.core.nlp.tokenizer.
ContractionsPTB
org.apache.ctakes.utils.xcas_comparison.
ConvertAndCompare
org.apache.ctakes.assertion.medfacts.
Converti2b2AnnotationsToCTAKES
org.apache.ctakes.assertion.medfacts.
ConvertXMIAssertionsToi2b2Format
org.apache.ctakes.ytex.kernel.evaluator.
ConvolutionKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.ytex.kernel.evaluator.
NamedEntityNegationKernel
org.apache.ctakes.temporal.ae.feature.
CoordinateFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.coreference.util.
CorefConsts
org.apache.ctakes.ytex.kernel.evaluator.
CorpusKernelEvaluatorImpl
(implements org.apache.ctakes.ytex.kernel.evaluator.
CorpusKernelEvaluator
)
org.apache.ctakes.ytex.kernel.evaluator.
CorpusKernelEvaluatorImpl.InstanceIDRowMapper
org.apache.ctakes.ytex.kernel.evaluator.
CorpusKernelEvaluatorImpl.SliceEvaluator
(implements java.util.concurrent.Callable<V>)
org.apache.ctakes.utils.struct.
CounterTreeMap
<K>
org.apache.ctakes.temporal.ae.feature.
CoveredTextToValuesExtractor
org.apache.ctakes.temporal.ae.feature.
CoveredTextToValuesExtractor.StringToDoublesProcessor
org.apache.ctakes.assertion.medfacts.cleartk.
CreateAssertionDescriptor
org.apache.ctakes.dictionary.assertion.
CreateAssertionLuceneIndexFromDelimitedFile
org.apache.ctakes.assertion.train.
CrossValidateAttributeModels
org.apache.ctakes.assertion.train.
CrossValidateChi2GridSearch
org.apache.ctakes.ytex.kernel.model.
CrossValidationFold
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
CrossValidationFoldInstance
(implements java.io.Serializable)
org.apache.ctakes.core.util.
CtakesFileNamer
org.apache.ctakes.assertion.medfacts.cleartk.
CuePhrase
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
CueWordTest
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
CueWordTest2
org.apache.ctakes.dictionary.lookup2.util.
CuiCodeUtil
org.apache.ctakes.ytex.kernel.
CytoscapeHelperImpl
(implements org.apache.ctakes.ytex.kernel.
CytoscapeHelper
)
org.apache.ctakes.temporal.ae.feature.
DateAndMeasurementExtractor
org.apache.ctakes.core.fsm.machine.
DateFSM
org.apache.ctakes.core.util.
DateParser
org.apache.ctakes.ytex.tools.docanalyzer.
DBAnnotationViewerDialog.InteractiveFilter
(implements java.io.FilenameFilter)
org.apache.ctakes.ytex.tools.
DBPing
org.apache.ctakes.ytex.dao.
DBUtil
org.apache.ctakes.dictionary.lookup.ae.
DebugConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.drugner.fsm.machines.elements.
DecimalStrengthFSM
org.apache.ctakes.chunker.ae.
DefaultChunkCreator
(implements org.apache.ctakes.chunker.ae.
ChunkCreator
)
org.apache.ctakes.dictionary.lookup2.util.collection.
DefaultCollectionMap
<K,V,T> (implements org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T>)
org.apache.ctakes.dictionary.lookup2.util.
DefaultDictionarySpec
(implements org.apache.ctakes.dictionary.lookup2.util.
DictionarySpec
)
org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
org.apache.ctakes.preprocessor.
ClinicalNotePreProcessor
(implements org.apache.ctakes.preprocessor.
PreProcessor
)
org.apache.ctakes.jdl.data.xml.
SaxParser
org.apache.ctakes.utils.xcas_comparison.
XcasProcessor
DefaultSimilarity
org.apache.ctakes.utils.wiki.
ApproximateSimilarity
org.apache.ctakes.dictionary.lookup2.textspan.
DefaultTextSpan
(implements org.apache.ctakes.dictionary.lookup2.textspan.
TextSpan
)
org.apache.ctakes.dependency.parser.util.
Delim
org.apache.ctakes.temporal.ae.feature.
DependencyFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.relationextractor.ae.features.
DependencyParseUtils
org.apache.ctakes.temporal.ae.feature.
DependencyParseUtils
org.apache.ctakes.relationextractor.ae.features.
DependencyPathFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
DependencyPathFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
DependencyPathRegexpFeatureExtractor
org.apache.ctakes.dependency.parser.util.
DependencyRegex
org.apache.ctakes.temporal.ae.feature.treekernel.
DependencySingleTreeExtractor
org.apache.ctakes.relationextractor.ae.features.
DependencyTreeFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dependency.parser.util.
DependencyUtility
org.apache.ctakes.dependency.parser.util.
ClearDependencyUtility
org.apache.ctakes.temporal.ae.feature.
DependingVerbsFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
DeterminerRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dictionary.lookup2.dictionary.
DictionaryDescriptorParser
org.apache.ctakes.dictionary.lookup.
DictionaryEngine
org.apache.ctakes.dictionary.lookup2.ae.
DictionaryLookupFactory
org.apache.ctakes.dictionary.lookup.ae.
DirectLookupInitializerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
)
org.apache.ctakes.dictionary.lookup.algorithms.
DirectPassThroughImpl
(implements org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
)
org.apache.ctakes.utils.distsem.
DistanceMetrics
org.apache.ctakes.temporal.ae.feature.
DocTimeRelFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.ytex.uima.model.
Document
(implements java.io.Serializable)
org.apache.ctakes.ytex.uima.model.
DocumentAnnotation
(implements java.io.Serializable)
org.apache.ctakes.ytex.uima.model.
DocumentClass
(implements java.io.Serializable)
org.apache.ctakes.ytex.uima.dao.
DocumentDaoImpl
(implements org.apache.ctakes.ytex.uima.dao.
DocumentDao
)
org.apache.ctakes.core.util.
DocumentIDAnnotationUtil
org.apache.ctakes.ytex.uima.mapper.
DocumentMapperServiceImpl
(implements org.apache.ctakes.ytex.uima.mapper.
DocumentMapperService
)
org.apache.ctakes.ytex.uima.mapper.
DocumentMapperServiceImpl.AnnoFSAttribute
org.apache.ctakes.ytex.uima.mapper.
DocumentMapperServiceImpl.AnnoLink
org.apache.ctakes.preprocessor.
DocumentMetaData
org.apache.ctakes.ytex.weka.
DocumentResultInstanceImporter
(implements org.apache.ctakes.ytex.weka.
WekaResultInstanceImporter
)
org.apache.ctakes.ytex.web.search.
DocumentSearchResult
(implements java.io.Serializable)
org.apache.ctakes.ytex.web.search.
DocumentSearchServiceImpl
(implements org.apache.ctakes.ytex.web.search.
DocumentSearchService
)
org.apache.ctakes.ytex.web.search.
DocumentSearchServiceImpl.DocumentSearchResultMapper
org.apache.ctakes.core.util.
DocumentSection
org.apache.ctakes.ytex.web.search.
DocumentViewBean
(implements java.io.Serializable)
org.apache.ctakes.jdl.data.xml.
DomParser
org.apache.ctakes.jdl.data.xml.
DomUtil
org.apache.ctakes.drugner.elements.
DosageElement
org.apache.ctakes.drugner.fsm.machines.elements.
DosagesFSM
org.apache.ctakes.drugner.elements.
DrugChangeStatusElement
org.apache.ctakes.drugner.fsm.machines.elements.
DrugChangeStatusFSM
org.apache.ctakes.drugner.
DrugMention
(implements org.apache.ctakes.drugner.
DrugModel
)
org.apache.ctakes.preprocessor.
DTDloader
(implements org.xml.sax.EntityResolver)
org.apache.ctakes.temporal.ae.feature.duration.
DurationDistributionFeatureExtractor
org.apache.ctakes.drugner.elements.
DurationElement
org.apache.ctakes.temporal.ae.feature.duration.
DurationEventEventFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.duration.
DurationEventTimeFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.duration.
DurationExpectationFeatureExtractor
org.apache.ctakes.drugner.fsm.machines.elements.
DurationFSM
org.apache.ctakes.temporal.ae.feature.duration.
DurationTimeUnitFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.coreference.util.
EditDistance
org.apache.ctakes.relationextractor.ae.features.
EmbeddingFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
EmptyFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.core.sentence.
EndOfSentenceScannerImpl
org.apache.ctakes.relationextractor.ae.features.
EntitySpanFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dictionary.lookup2.util.collection.
EnumSetMap
<K,V> (implements org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T>)
org.apache.ctakes.utils.env.
EnvironmentVariable
org.apache.ctakes.ytex.kernel.evaluator.
EqualityKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.ParameterSettings
org.apache.ctakes.relationextractor.data.analysis.
EventAndEntityViewer
org.apache.ctakes.temporal.ae.feature.
EventArgumentPropertyExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.data.analysis.
EventContextAnalysisPipeline
org.apache.ctakes.temporal.duration.
EventDurationDistribution
org.apache.ctakes.temporal.duration.
EventDurationDistribution.FileSizeComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.temporal.duration.
EventDurationDistribution.Options
org.apache.ctakes.temporal.duration.
EventEventDurationStatistics
org.apache.ctakes.temporal.ae.feature.
EventPositionFeatureExtractor
org.apache.ctakes.temporal.ae.feature.
EventPositionRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.data.analysis.
EventPrinterPipeline
org.apache.ctakes.temporal.pipelines.
EventPrintingPipeline
org.apache.ctakes.temporal.ae.feature.
EventPropertyExtractor
org.apache.ctakes.temporal.duration.
EventTimeDurationStatistics
org.apache.ctakes.temporal.ae.feature.treekernel.
EventTimeFlatTreeFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
EventTimeRelationFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
EventTimeRelationsFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.examples.pipelines.
ExampleAggregatePipeline
org.apache.ctakes.ytex.weka.
ExportBagOfWords
org.apache.ctakes.ytex.tools.
ExportCAS
org.apache.ctakes.ytex.weka.
ExportGramMatrix
org.apache.ctakes.temporal.duration.
ExtractDurationsUsingContainsRelation
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
ExtractorListFeatureFunctionConverter
org.apache.ctakes.dictionary.lookup2.util.
FastLookupToken
org.apache.ctakes.ytex.kernel.model.
FeatureEvaluation
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
FeatureParentChild
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
FeatureRank
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.model.
FeatureRank.FeatureRankAsc
(implements java.util.Comparator<T>)
org.apache.ctakes.ytex.kernel.model.
FeatureRank.FeatureRankDesc
(implements java.util.Comparator<T>)
org.apache.ctakes.coreference.util.
FeatureVector
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
FedaFeatureFunction
org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraintImpl
(implements org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraint
)
org.apache.ctakes.core.resource.
FileLocator
org.apache.ctakes.core.resource.
FileResourceImpl
(implements org.apache.ctakes.core.resource.
FileResource
)
org.apache.ctakes.jdl.common.
FileUtil
org.apache.ctakes.ytex.kernel.
FileUtil
org.apache.ctakes.ytex.kernel.
FileUtil.DirectoryFileFilter
(implements java.io.FileFilter)
org.apache.ctakes.ytex.kernel.
FileUtil.PrefixFileFilter
(implements java.io.FileFilter)
org.apache.ctakes.ytex.kernel.
FileUtil.SuffixFileFilter
(implements java.io.FileFilter)
org.apache.ctakes.dictionary.lookup.ae.
FirstTokenPermLookupInitializerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
)
org.apache.ctakes.ytex.uima.lookup.ae.
FirstTokenPermLookupInitializerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
)
org.apache.ctakes.dictionary.lookup.algorithms.
FirstTokenPermutationImpl
(implements org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
)
org.apache.ctakes.relationextractor.ae.features.
FlatTreeFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.ytex.kernel.
FoldGeneratorImpl
(implements org.apache.ctakes.ytex.kernel.
FoldGenerator
)
org.apache.ctakes.drugner.elements.
FormElement
org.apache.ctakes.drugner.fsm.machines.elements.
FormFSM
org.apache.ctakes.core.fsm.machine.
FractionFSM
org.apache.ctakes.drugner.fsm.machines.elements.
FractionStrengthFSM
org.apache.ctakes.utils.tree.
FragmentUtils
org.apache.ctakes.temporal.ae.feature.
FramesetCategoryExtractor
org.apache.ctakes.drugner.elements.
FrequencyElement
org.apache.ctakes.drugner.fsm.machines.elements.
FrequencyFSM
org.apache.ctakes.drugner.elements.
FrequencyUnitElement
org.apache.ctakes.drugner.fsm.machines.elements.
FrequencyUnitFSM
org.apache.ctakes.coreference.util.
FSIteratorToList
org.apache.ctakes.core.util.
FSListIterator
<T> (implements java.util.Iterator<E>)
org.apache.ctakes.core.util.
FSUtil
org.apache.ctakes.ytex.web.search.
FullTextDocumentViewBean
org.apache.ctakes.ytex.web.search.
FullTextSearchBean
org.apache.ctakes.assertion.pipelines.
GenerateDependencyRepresentation
org.apache.ctakes.assertion.pipelines.
GenerateDependencyRepresentation.Options
org.apache.ctakes.smokingstatus.MLutil.
GenerateTrainingData
org.apache.ctakes.assertion.pipelines.
GenerateTreeRepresentation
org.apache.ctakes.assertion.pipelines.
GenerateTreeRepresentation.Options
org.apache.ctakes.assertion.attributes.generic.
GenericAttributeClassifier
org.apache.ctakes.assertion.attributes.features.
GenericFeaturesExtractor
org.apache.ctakes.relationextractor.data.
GoldAnnotationAnalysisPipeline
org.apache.ctakes.relationextractor.data.
GoldAnnotationAnalysisPipeline.Options
org.apache.ctakes.assertion.pipelines.
GoldEntityAndAttributeReaderPipeline
org.apache.ctakes.assertion.pipelines.
GoldEntityAndAttributeReaderPipelineForSeedCorpus
org.apache.ctakes.relationextractor.data.analysis.
GoldRelationViewer
org.apache.ctakes.temporal.data.analysis.
GoldRelationViewer
org.apache.ctakes.coreference.util.
GoldStandardLabeler
org.apache.ctakes.ytex.weka.
GramMatrixExporterImpl.GramMatrixArffDecorator
(implements org.apache.ctakes.ytex.kernel.
BagOfWordsDecorator
)
org.apache.ctakes.dictionary.lookup2.util.collection.
HashSetMap
<K,V> (implements org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T>)
org.apache.ctakes.assertion.attributes.history.
HistoryAttributeClassifier
org.apache.ctakes.assertion.attributes.history.
HistoryAttributeClassifier.AnnotLocationComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.assertion.attributes.features.
HistoryFeaturesExtractor
org.apache.ctakes.coreference.util.
HobbsTreeNavigator
org.apache.ctakes.core.cc.
HtmlTableCasConsumer.AnnotationLengthComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.core.cc.
HtmlTableCasConsumer.AnnotationPositionComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.drugner.fsm.machines.util.
HyphenatedDrugFSM
org.apache.ctakes.core.nlp.tokenizer.
HyphenatedPTB
org.apache.ctakes.core.ci.
HyphenTextModifierImpl
(implements org.apache.ctakes.core.ci.
TextModifier
)
org.apache.ctakes.temporal.eval.
I2B2Data
org.apache.ctakes.temporal.ae.feature.
IdentifiedAnnotationFeatureExtractor
org.apache.ctakes.temporal.ae.feature.
IdentifiedAnnotationFeatureExtractor.StringToDoublesProcessor
org.apache.ctakes.core.util.
IdentifiedAnnotationUtil
org.apache.ctakes.dictionary.lookup2.util.collection.
ImmutableCollectionMap
<K,V,T> (implements org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T>)
org.apache.ctakes.ytex.weka.
ImportWekaResults
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluatorImpl
(implements org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluator
)
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluatorImpl.ConceptInstanceMapExtractor
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluatorImpl.JointDistribution
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluatorImpl.Parameters
org.apache.ctakes.ytex.kernel.
InfoContentEvaluatorImpl
(implements org.apache.ctakes.ytex.kernel.
InfoContentEvaluator
)
org.apache.ctakes.ytex.uima.resource.
InitableJdbcConnectionResourceImpl
(implements org.apache.ctakes.core.resource.
JdbcConnectionResource
)
org.apache.ctakes.utils.build.
InstallPearSilently
org.apache.ctakes.utils.build.
InstallPearSilently.RunInstallation
(implements java.lang.Runnable)
org.apache.ctakes.utils.build.
InstallPipelineFromPears
org.apache.ctakes.ytex.kernel.
InstanceData
org.apache.ctakes.ytex.sparsematrix.
InstanceDataExporterImpl
(implements org.apache.ctakes.ytex.sparsematrix.
InstanceDataExporter
)
org.apache.ctakes.ytex.kernel.tree.
InstanceTreeBuilderImpl
(implements org.apache.ctakes.ytex.kernel.tree.
InstanceTreeBuilder
)
org.apache.ctakes.preprocessor.
IntegerRange
org.apache.ctakes.ytex.kernel.
IntrinsicInfoContentEvaluatorImpl
(implements org.apache.ctakes.ytex.kernel.
IntrinsicInfoContentEvaluator
)
org.apache.ctakes.ytex.kernel.
IntrinsicInfoContentEvaluatorImpl.IntrinsicICInfo
org.apache.ctakes.ytex.kernel.
IRMetrics
org.apache.ctakes.ytex.uima.mapper.
ISO8601Converter
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.attributes.
SubjectAttributeAnalysisEngine
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.attributes.
GenericAttributeAnalysisEngine
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.cr.
MiPACQKnowtatorXMLReader
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.cr.
GoldEntityAndAttributeReader
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
MergeGoldViewFromOneCasIntoInitialViewOfAnotherCas
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvaluation.OnlyGoldAssertions
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvaluation.ReplaceCTakesEntityMentionsAndModifiersWithGold
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvaluation.ReferenceIdentifiedAnnotationsSystemToGoldCopier
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvaluation.ReferenceSupportingAnnotationsSystemToGoldCopier
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvaluation.ReferenceAnnotationsSystemAssertionClearer
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.medfacts.
ConceptConverterAnalysisEngine
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.medfacts.
AssertionAnalysisEngine
JCasAnnotator_ImplBase
org.apache.ctakes.assertion.medfacts.cleartk.
AlternateCuePhraseAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.chunker.ae.adjuster.
ChunkAdjuster
JCasAnnotator_ImplBase
org.apache.ctakes.chunker.ae.
Chunker
JCasAnnotator_ImplBase
org.apache.ctakes.clinicalpipeline.ae.
ExtractionPrepAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.clinicalpipeline.
ClinicalPipelineFactory.CopyNPChunksToLookupWindowAnnotations
JCasAnnotator_ImplBase
org.apache.ctakes.clinicalpipeline.
ClinicalPipelineFactory.RemoveEnclosedLookupWindows
JCasAnnotator_ImplBase
org.apache.ctakes.constituency.parser.ae.
ParserEvaluationAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.constituency.parser.ae.
ConstituencyParser
JCasAnnotator_ImplBase
org.apache.ctakes.contexttokenizer.ae.
ContextDependentTokenizerAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
TokenizerAnnotatorPTB
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
TokenizerAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
SimpleSegmentWithTagsAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
SimpleSegmentAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader
org.apache.ctakes.temporal.ae.
THYMEKnowtatorXMLReader
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
SentenceDetector
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
SectionSegmentAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
OverlapAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
NullAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
FilterAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
DocumentIdPrinterAnalysisEngine
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
CopyAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.core.ae.
CDASegmentAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.ae.
MipacqSvmChainCreator
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.ae.
MipacqMarkablePairGenerator
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.ae.
MipacqMarkableExpander
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.ae.
MipacqMarkableCreator
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.cc.
PreprocessAndWriteXmi.SerializeDocumentToXMI
JCasAnnotator_ImplBase
org.apache.ctakes.coreference.cc.
ODIEVectorFileWriter
JCasAnnotator_ImplBase
org.apache.ctakes.dependency.parser.ae.
ClearNLPSemanticRoleLabelerAE
JCasAnnotator_ImplBase
org.apache.ctakes.dependency.parser.ae.
ClearNLPDependencyParserAE
JCasAnnotator_ImplBase
org.apache.ctakes.dictionary.lookup.ae.
DictionaryLookupAnnotator
org.apache.ctakes.dictionary.lookup.ae.
UmlsDictionaryLookupAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.dictionary.lookup.ae.
ThreadedDictionaryLookupAnnotator
org.apache.ctakes.dictionary.lookup.ae.
ThreadedUmlsDictionaryLookupAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.dictionary.lookup2.ae.
AbstractJCasTermAnnotator
(implements org.apache.ctakes.dictionary.lookup2.ae.
JCasTermAnnotator
, org.apache.ctakes.dictionary.lookup2.ae.
WindowProcessor
)
org.apache.ctakes.dictionary.lookup2.ae.
DefaultJCasTermAnnotator
org.apache.ctakes.dictionary.lookup2.ae.
OverlapJCasTermAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.drugner.ae.
DrugMentionAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.drugner.ae.
CopyDrugAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.examples.ae.
ExampleHelloWorldAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.lvg.ae.
LvgBaseTokenAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.lvg.ae.
LvgAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.necontexts.
ContextAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.postagger.
POSTagger
JCasAnnotator_ImplBase
org.apache.ctakes.postagger.
ClearNLPPOSTaggerAE
JCasAnnotator_ImplBase
org.apache.ctakes.preprocessor.ae.
CdaCasInitializer
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.ae.
IdentifiedAnnotationExpander
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.data.analysis.
GoldRelationViewer.RelationContextPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.data.analysis.
EventAndEntityViewer.RelationContextPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.data.
GoldAnnotationStatsCalculator
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
SHARPXMI.DocumentIDAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
SHARPXMI.CopyDocumentTextToGoldView
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.RemoveCTakesMentionsAndCopyGoldRelations
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.ReplaceCTakesMentionsWithGoldMentions
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.RemoveSmallerEventMentions
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.eval.
ModifierExtractorEvaluation.OnlyGoldModifiers
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.pipelines.
TreeFeatureConsumer
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.pipelines.
SelectiveRelationAnnotationViewer.RelationExtractorPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorConsumer
JCasAnnotator_ImplBase
org.apache.ctakes.relationextractor.pipelines.
RelationAnnotationViewer.RelationExtractorPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.sideeffect.ae.
SideEffectAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.sideeffect.ae.
SESentenceFeatureAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.sideeffect.ae.
PSESentenceAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.smokingstatus.ae.
SentenceAdjuster
JCasAnnotator_ImplBase
org.apache.ctakes.smokingstatus.ae.
PcsClassifierAnnotator_libsvm
JCasAnnotator_ImplBase
org.apache.ctakes.smokingstatus.ae.
KuRuleBasedClassifierAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.smokingstatus.ae.
ClassifiableEntries
JCasAnnotator_ImplBase
org.apache.ctakes.template.filler.ae.
TemplateFillerAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
TimexToClearTKTimexAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
THYMETreebankReader
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
THYMEAnaforaXMLReader
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
TemporalRelationRuleAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
I2B2TemporalXMLReader
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
EventToClearTKEventAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
ClearTKLinkToTHYMELinkAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
ClearTKDocumentCreationTimeAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.ae.
ClearTKDocTimeRelAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.data.analysis.
RelationContextViewerPipeline.RelationContextPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.data.analysis.
PrintNormalizedTemporalExpressions
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.data.analysis.
GoldRelationViewer.RelationContextPrinter
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.data.analysis.
EventPrinterPipeline.EventWriter
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.data.analysis.
EventContextAnalysisPipeline.EventAndTokenContextWriter
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
PreserveUMLSEventTimeRelationsInGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
PreserveUMLSEventEventRelationsInGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
PreserveCertainEventTimeRelationsInGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
PreserveCertainEventsInGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
PreserveCertainEventEventRelationsInGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
ExtractDurationsUsingContainsRelation.ProcessRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
EventTimeDurationStatistics.AnalyseRelationArgumentDuration
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
EventEventDurationStatistics.AnalyseRelationArgumentDuration
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.duration.
EventDurationDistribution.TemporalDurationExtractor
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
RemoveTreeAlignedMentions
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfTemporalRelations_ImplBase.PreserveEventEventRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfTemporalRelations_ImplBase.RemoveNonContainsRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfTemporalRelations_ImplBase.RemoveGoldAttributes
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.RemoveEventEventRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.OverwriteTemporalRelationToSystem
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.RemoveCrossSentenceRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.RemoveRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.AddContain2Overlap
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.AddFlippedOverlap
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.AddClosure
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.RemoveNullArgumentRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.RemoveNonTLINKRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.RemoveRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.AddFlippedOverlap
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.FindLongDisRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.AddClosure
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.RemoveNonUMLSEtEvents
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.RemoveEventEventRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.AddPotentialRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.RemoveCrossSentenceRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.CountCloseRelation
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.RemoveRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.AddTransitiveContainsRelations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.AddContain2Overlap
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.AddFlippedOverlap
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.Overlap2Contains
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.AddClosure
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventProperties.ClearEventProperties
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.CountCloseRelation
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.RemoveNonUMLSEvents
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.AddEEPotentialRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.RemoveCrossSentenceRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.RemoveRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.AddTransitiveContainsRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.AddContain2Overlap
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.AddFlippedOverlap
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.AddClosure
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKEventProperties.ClearEventProperties
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.RemoveNonUMLSEvents
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.RemoveNonTLINKRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.RemoveCrossSentenceRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.RemoveRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.AddTransitiveContainsRelations
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.AddContain2Overlap
org.apache.uima.fit.component.JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.AddFlippedOverlap
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.AddClosure
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.RemoveEnclosedLookupWindows
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.EntityMentionRemover
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.EventMentionRemover
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.XMIWriter
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.XMIReader
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.TimexAnnotationCorrector
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.CopyFromGold
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.WriteI2B2XML
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.WriteAnaforaXML
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.pipelines.
FullTemporalExtractionPipeline.CopyPropertiesToTemporalEventAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.temporal.pipelines.
EventPrintingPipeline.PrintEventAnnotations
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
SentenceDetector
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
SenseDisambiguatorAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
SegmentRegexAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
NamedEntityRegexAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
MetaMapToCTakesAnnotator
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
DBConsumer
JCasAnnotator_ImplBase
org.apache.ctakes.ytex.uima.annotators.
DateAnnotator
JCasCollectionReader_ImplBase
org.apache.ctakes.assertion.eval.
XMIReader
JCasCollectionReader_ImplBase
org.apache.ctakes.core.cr.
XMIReader
JCasCollectionReader_ImplBase
org.apache.ctakes.core.cr.
TextReader
JCasCollectionReader_ImplBase
org.apache.ctakes.dependency.parser.ae.util.
XMIReader
JCasCollectionReader_ImplBase
org.apache.ctakes.relationextractor.eval.
XMIReader
JCasConsumer_ImplBase
org.apache.ctakes.assertion.cc.
JudgeAttributeInstances
org.apache.ctakes.core.util.
JCasUtil
org.apache.ctakes.core.resource.
JdbcConnectionResourceImpl
(implements org.apache.ctakes.core.resource.
JdbcConnectionResource
)
org.apache.ctakes.core.cc.
JdbcWriterTemplate.I2b2Concept
org.apache.ctakes.jdl.data.base.
JdlConnection
JTextAnnotator_ImplBase
org.apache.ctakes.sideeffect.ae.
SESentenceClassifierAnnotator
org.apache.ctakes.assertion.train.
JustJudgeStep
org.apache.ctakes.utils.kernel.
Kernel
org.apache.ctakes.utils.kernel.
PolyKernel
org.apache.ctakes.utils.kernel.
LinearKernel
org.apache.ctakes.utils.kernel.
RBFKernel
org.apache.ctakes.constituency.parser.treekernel.
TreeKernel
org.apache.ctakes.ytex.kernel.
KernelContextHolder
org.apache.ctakes.ytex.kernel.model.
KernelEvaluation
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.dao.
KernelEvaluationDaoImpl
(implements org.apache.ctakes.ytex.kernel.dao.
KernelEvaluationDao
)
org.apache.ctakes.ytex.kernel.model.
KernelEvaluationInstance
(implements java.io.Serializable)
org.apache.ctakes.ytex.
KernelLauncher
org.apache.ctakes.coreference.treekernel.training.
KernelMatrixCompositor
org.apache.ctakes.ytex.kernel.
KernelUtilImpl
(implements org.apache.ctakes.ytex.kernel.
KernelUtil
)
org.apache.ctakes.core.knowtator.
KnowtatorAnnotation
org.apache.ctakes.core.knowtator.
KnowtatorAnnotation.Span
org.apache.ctakes.core.knowtator.
KnowtatorXMLParser
org.apache.ctakes.core.knowtator.
KnowtatorXMLParser.IdAndSlot
<T>
org.apache.ctakes.core.knowtator.
KnowtatorXMLParser.Option
<T> (implements java.lang.Iterable<T>)
org.apache.ctakes.core.knowtator.
KnowtatorXMLParser.Slot
<T>
org.apache.ctakes.ytex.kernel.metric.
LCSPath
(implements java.io.Serializable)
org.apache.ctakes.ytex.libsvm.
LibSVMFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.ytex.libsvm.
LibSVMGramMatrixExporterImpl
(implements org.apache.ctakes.ytex.libsvm.
LibSVMGramMatrixExporter
)
org.apache.ctakes.ytex.libsvm.
LibSVMUtilImpl
(implements org.apache.ctakes.ytex.libsvm.
LibSVMUtil
)
org.apache.ctakes.coreference.treekernel.training.
LinearKernelMatrixWriter
(implements org.apache.ctakes.coreference.util.
ThreadDelegator
)
org.apache.ctakes.core.resource.
LinesFromFileStringsResourceImpl
(implements org.apache.ctakes.core.resource.
StringsResource
)
org.apache.ctakes.core.util.
ListFactory
org.apache.ctakes.temporal.ae.feature.
ListFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.core.util.
ListIterable
<T> (implements java.lang.Iterable<T>)
org.apache.ctakes.jdl.data.loader.
Loader
org.apache.ctakes.jdl.data.loader.
CsvLoader
org.apache.ctakes.jdl.data.loader.
XmlLoader
org.apache.ctakes.dictionary.lookup.ae.
LookupAnnotationToJCasAdapter
(implements org.apache.ctakes.dictionary.lookup.vo.
LookupToken
)
org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotationToTokAdapter
(implements org.apache.ctakes.dictionary.lookup.vo.
LookupToken
)
org.apache.ctakes.dictionary.lookup.vo.
LookupHit
org.apache.ctakes.dictionary.lookup.ae.
LookupParseUtilities
org.apache.ctakes.dictionary.lookup.ae.
LookupParseUtilitiesRefactor
org.apache.ctakes.dictionary.lookup.ae.
LookupSpec
org.apache.ctakes.dictionary.lookup2.util.
LookupUtil
org.apache.ctakes.core.resource.
LuceneIndexReaderResourceImpl
(implements org.apache.ctakes.core.resource.
LuceneIndexReaderResource
)
org.apache.ctakes.lvg.ae.
LvgAnnotator.LemmaLocalClass
org.apache.ctakes.lvg.ae.
LvgBaseTokenAnnotator.LemmaLocalClass
org.apache.ctakes.lvg.resource.
LvgCmdApiResourceImpl
(implements org.apache.ctakes.lvg.resource.
LvgCmdApiResource
)
org.apache.ctakes.core.util.
Mapper
org.apache.ctakes.ytex.uima.mapper.
MapperConfig
org.apache.ctakes.coreference.util.
MarkableDepUtils
org.apache.ctakes.coreference.ae.
MarkableProb
org.apache.ctakes.coreference.util.
MarkableTreeUtils
org.apache.ctakes.constituency.parser.
MaxentParserWrapper
(implements org.apache.ctakes.constituency.parser.
ParserWrapper
)
org.apache.ctakes.core.fsm.machine.
MeasurementFSM
org.apache.ctakes.dictionary.lookup.
MetaDataHitComparator
(implements java.util.Comparator<T>, org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
)
org.apache.ctakes.dictionary.lookup.filter.
MetaDataPostLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.ytex.uima.annotators.
MetaMapToCTakesAnnotator.NegSpan
org.apache.ctakes.ytex.kernel.evaluator.
MethodCachingInterceptor
org.apache.ctakes.assertion.cr.
MiPACQKnowtatorXMLReader.DelayedFeature
org.apache.ctakes.assertion.cr.
MiPACQKnowtatorXMLReader.DelayedFeatureFromFeature
org.apache.ctakes.assertion.cr.
MiPACQKnowtatorXMLReader.DelayedRelationFeature
org.apache.ctakes.ytex.umls.model.
MRCONSO
(implements java.io.Serializable)
org.apache.ctakes.ytex.umls.model.
MRREL
(implements java.io.Serializable)
org.apache.ctakes.ytex.umls.model.
MRSTY
(implements java.io.Serializable)
org.apache.ctakes.dictionary.lookup2.textspan.
MultiTextSpan
(implements org.apache.ctakes.dictionary.lookup2.textspan.
TextSpan
)
org.apache.ctakes.temporal.ae.feature.
MultiTokenFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.assertion.attributes.features.selection.
MutualInformationFeatureSelection.MutualInformationStats
<OUTCOME_T>
org.apache.ctakes.temporal.ae.feature.selection.
MutualInformationFeatureSelection.MutualInformationStats
<OUTCOME_T>
org.apache.ctakes.necontexts.
NamedEntityContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.necontexts.negation.
NegationContextAnalyzer
org.apache.ctakes.necontexts.status.
StatusContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.smokingstatus.context.
NamedEntityContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.smokingstatus.context.negation.
NegationContextAnalyzer
org.apache.ctakes.necontexts.
NamedEntityContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.necontexts.negation.
NegationContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.necontexts.status.
StatusContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.relationextractor.ae.features.
NamedEntityFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.ytex.uima.model.
NamedEntityRegex
(implements java.io.Serializable)
org.apache.ctakes.ytex.uima.dao.
NamedEntityRegexDaoImpl
(implements org.apache.ctakes.ytex.uima.dao.
NamedEntityRegexDao
)
org.apache.ctakes.temporal.ae.feature.
NearbyVerbTenseRelationExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
NearbyVerbTenseXExtractor
org.apache.ctakes.temporal.ae.feature.
NearestFlagFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
NegationDependencyFeatureExtractor
org.apache.ctakes.assertion.util.
NegationDepRegex
org.apache.ctakes.core.fsm.machine.
NegationFSM
org.apache.ctakes.smokingstatus.machine.
NegationFSM
org.apache.ctakes.assertion.util.
NegationManualDepContextAnalyzer
org.apache.ctakes.assertion.cr.
NegExAnnotation
org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator.NamedEntityTargetAnnoFilter
(implements org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator.TargetAnnoFilter
)
org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator.NegexRule
org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator.NegexToken
(implements java.lang.Comparable<T>)
org.apache.ctakes.drugner.fsm.machines.util.
NegIndicatorFSM
(implements org.apache.ctakes.core.fsm.machine.
FSM
)
org.apache.ctakes.ytex.kernel.tree.
Node
(implements java.io.Serializable)
org.apache.ctakes.ytex.kernel.evaluator.
NodeAttributeKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.ytex.kernel.tree.
NodeKey
org.apache.ctakes.ytex.kernel.tree.
NodeMappingInfo
org.apache.ctakes.drugner.fsm.machines.util.
NonIndicatorFSM
org.apache.ctakes.ytex.kernel.evaluator.
NormKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.temporal.ae.feature.
NumberOfEventsInTheSameSentenceExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
NumberOfEventTimeBetweenCandidatesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.jdl.data.xml.jaxb.
ObjectFactoryBind
org.apache.ctakes.jdl.data.xml.jaxb.
ObjectFactoryUtil
org.apache.ctakes.ytex.kernel.model.
ObjPair
<T1,T2>
org.apache.ctakes.temporal.ae.feature.selection.
OddsRatioFeatureSelection.OddsRatioScorer
<OUTCOME_T>
org.apache.ctakes.core.nlp.tokenizer.
OffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.ytex.kernel.
OrderedPair
<T>
org.apache.ctakes.core.ae.
OverlapAnnotator.DeleteActionImpl
(implements org.apache.ctakes.core.ae.
OverlapAnnotator.Action
)
org.apache.ctakes.core.ae.
OverlapAnnotator.ModifyActionImpl
(implements org.apache.ctakes.core.ae.
OverlapAnnotator.Action
)
org.apache.ctakes.ytex.kernel.pagerank.
PageRankServiceImpl
(implements org.apache.ctakes.ytex.kernel.pagerank.
PageRankService
)
org.apache.ctakes.ytex.kernel.
Pair
<T>
org.apache.ctakes.relationextractor.eval.
ParameterSettings
org.apache.ctakes.core.util.
ParamUtil
org.apache.ctakes.coreference.util.
ParentPtrTree
org.apache.ctakes.temporal.ae.feature.
ParseFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
ParseSpanFeatureExtractor
org.apache.ctakes.relationextractor.ae.features.
PartOfSpeechFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.smokingstatus.patientLevel.
PatientLevelSmokingStatus
org.apache.ctakes.sideeffect.util.
PatternMatch
org.apache.ctakes.dictionary.lookup.algorithms.
PermutationUtil
org.apache.ctakes.core.fsm.machine.
PersonTitleFSM
org.apache.ctakes.relationextractor.ae.features.
PETFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.relationextractor.ae.features.
PhraseChunkingExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.chunker.ae.
PhraseTypeChunkCreator
(implements org.apache.ctakes.chunker.ae.
ChunkCreator
)
org.apache.ctakes.assertion.train.
PolarityCotrainingTests
org.apache.ctakes.assertion.train.
PolarityCotrainingTests.TestPair
org.apache.ctakes.assertion.train.
PolarityCotrainingTrain
org.apache.ctakes.assertion.train.
PolarityDomainAdaptationTests
org.apache.ctakes.assertion.train.
PolarityDomainAdaptationTests.TestPair
org.apache.ctakes.assertion.train.
PolarityDomainAdaptationTrain
org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilterGroupImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.temporal.ae.feature.
PredicateArgumentExtractor
org.apache.ctakes.relationextractor.ae.features.
PrepositionFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.coreference.cc.
PreprocessAndWriteXmi
org.apache.ctakes.coreference.cc.
PreprocessAndWriteXmi.Options
org.apache.ctakes.temporal.data.analysis.
PrintFailedTimeNormalizations
org.apache.ctakes.temporal.data.analysis.
PrintInconsistentAnnotations
org.apache.ctakes.temporal.eval.
PrintRelations
org.apache.ctakes.relationextractor.eval.
PrintRelationStatistics
org.apache.ctakes.relationextractor.eval.
PrintRelationStatistics.Options
org.apache.ctakes.jdl.common.
PropertiesFile
org.apache.ctakes.jdl.common.
PropFile
org.apache.ctakes.relationextractor.ae.features.
PunctuationFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.ytex.kernel.tree.
QueryMappingInfo
org.apache.ctakes.core.fsm.machine.
RangeFSM
org.apache.ctakes.drugner.fsm.machines.elements.
RangeStrengthFSM
org.apache.ctakes.dictionary.lookup2.term.
RareWordTerm
org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordTermMapCreator
org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordTermMapCreator.CuiTerm
org.apache.ctakes.assertion.train.
ReadAndPreprocessForAttributeModels
org.apache.ctakes.assertion.train.
ReadPreprocessTrainTestJudge
org.apache.ctakes.relationextractor.pipelines.
RelationAnnotationViewer
org.apache.ctakes.relationextractor.pipelines.
RelationAnnotationViewer.Options
org.apache.ctakes.temporal.data.analysis.
RelationContextViewerPipeline
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotator.IdentifiedAnnotationPair
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.HashableArguments
(implements java.lang.Comparable<T>)
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipeline
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipeline.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipelineSingleCas
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain
org.apache.ctakes.assertion.cr.
RelationInfo
org.apache.ctakes.relationextractor.knowtator.
RelationInfo
org.apache.ctakes.smokingstatus.ae.
ResolutionAnnotator
org.apache.ctakes.ytex.R.
RGramMatrixExporterImpl
(implements org.apache.ctakes.ytex.R.
RGramMatrixExporter
)
org.apache.ctakes.core.fsm.machine.
RomanNumeralFSM
org.apache.ctakes.drugner.elements.
RouteElement
org.apache.ctakes.drugner.fsm.machines.elements.
RouteFSM
org.apache.ctakes.ytex.kernel.
RRFtoWideTab
org.apache.ctakes.temporal.utils.
RunCorpusDiagnostics
org.apache.ctakes.ytex.tools.
RunCPE.StatusCallbackListenerImpl
org.apache.ctakes.assertion.pipelines.
RunJudgeAttributeInstances
org.apache.ctakes.assertion.pipelines.
RunJudgeAttributeInstances.Options
org.apache.ctakes.jdl.data.xml.
SchemaUtil
org.apache.ctakes.ytex.web.search.
SearchConfigBean
org.apache.ctakes.utils.wiki.
SearchResult
org.apache.ctakes.temporal.ae.feature.
SectionHeaderExtractor
org.apache.ctakes.temporal.ae.feature.
SectionHeaderRelationExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.preprocessor.
SegmentMetaData
org.apache.ctakes.ytex.uima.model.
SegmentRegex
(implements java.io.Serializable)
org.apache.ctakes.ytex.uima.dao.
SegmentRegexDaoImpl
(implements org.apache.ctakes.ytex.uima.dao.
SegmentRegexDao
)
org.apache.ctakes.relationextractor.pipelines.
SelectiveRelationAnnotationViewer
org.apache.ctakes.relationextractor.pipelines.
SelectiveRelationAnnotationViewer.Options
org.apache.ctakes.ytex.web.search.
SemanticSearchBean
(implements java.io.Serializable)
org.apache.ctakes.ytex.web.search.
SemanticSimBean
(implements java.io.Serializable)
org.apache.ctakes.ytex.web.search.
SemanticSimBean.SimilarityEntry
(implements java.io.Serializable)
org.apache.ctakes.ytex.web.search.
SemanticSimRegistryBean
org.apache.ctakes.ytex.web.search.
SemanticSimServiceBean
org.apache.ctakes.dictionary.lookup2.util.
SemanticUtil
org.apache.ctakes.ytex.semil.
SemiLFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.core.sentence.
SentenceDetectorCtakes
org.apache.ctakes.core.sentence.
SentenceSpan
org.apache.ctakes.ytex.uima.annotators.
SentenceSpan
org.apache.ctakes.sideeffect.ae.
SESentenceFeatureAnnotator.SideEffect
org.apache.ctakes.ytex.tools.
SetupAuiFirstWord
org.apache.ctakes.dictionary.lookup.filter.
SetValuePostLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
, org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.sideeffect.util.
SEUtil
org.apache.ctakes.ytex.svmlight.
SGTFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.assertion.pipelines.
SharpCorpusSplit
org.apache.ctakes.core.util.
SHARPKnowtatorXMLDefaults
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader.DelayedFeature
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader.DelayedFeatureFromFeature
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader.DelayedRelationFeature
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader.DelayedRelation
org.apache.ctakes.relationextractor.eval.
SHARPXMI
org.apache.ctakes.sideeffect.ae.
SideEffectAnnotator.PotentialSideEffect
org.apache.ctakes.sideeffect.ae.
SideEffectAnnotator.SideEffect
org.apache.ctakes.ytex.kernel.metric.
SimilarityInfo
(implements java.io.Serializable)
org.apache.ctakes.utils.tree.
SimpleTree
org.apache.ctakes.ytex.ws.
SimServiceInfo
org.apache.ctakes.ytex.kernel.
SimSvcContextHolder
SingleDocumentProcessor
org.apache.ctakes.assertion.medfacts.i2b2.api.
SingleDocumentProcessorCtakes
org.apache.ctakes.jdl.common.
Singleton
org.apache.ctakes.temporal.utils.
SMOTEplus
org.apache.ctakes.ytex.kernel.dao.
SortedSetUserType
org.apache.ctakes.core.util.
SourceMetadataUtil
org.apache.ctakes.assertion.cr.
Span
org.apache.ctakes.coreference.eval.helpers.
Span
org.apache.ctakes.relationextractor.knowtator.
Span
org.apache.ctakes.coreference.eval.helpers.
SpanAlignment
org.apache.ctakes.dictionary.lookup2.term.
SpannedRareWordTerm
org.apache.ctakes.coreference.eval.helpers.
SpanOffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.ytex.kernel.
SparseData
org.apache.ctakes.ytex.kernel.
SparseDataExporterImpl
(implements org.apache.ctakes.ytex.kernel.
SparseDataExporter
)
org.apache.ctakes.ytex.sparsematrix.
SparseMatrixFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.temporal.ae.feature.
SpecialAnnotationRelationExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.relationextractor.data.
Splitter
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
SRLFeatureExtractor
org.apache.ctakes.temporal.ae.feature.
SRLRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dependency.parser.util.
SRLUtility
org.apache.ctakes.drugner.elements.
StartDateElement
State
org.apache.ctakes.core.fsm.state.
NamedState
org.apache.ctakes.drugner.fsm.states.util.
IndentStartState
org.apache.ctakes.core.fsm.state.
NonTerminalEndState
org.apache.ctakes.relationextractor.data.
Stats
org.apache.ctakes.core.fsm.machine.
StatusIndicatorFSM
org.apache.ctakes.drugner.fsm.machines.util.
StatusIndicatorFSM
org.apache.ctakes.ytex.uima.lookup.ae.
StemmedLookupAnnotationToJCasAdapter
(implements org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotation
, org.apache.ctakes.dictionary.lookup.vo.
LookupToken
)
org.apache.ctakes.drugner.elements.
StrengthElement
org.apache.ctakes.drugner.fsm.machines.elements.
StrengthFSM
org.apache.ctakes.drugner.elements.
StrengthUnitElement
org.apache.ctakes.drugner.fsm.machines.elements.
StrengthUnitFSM
org.apache.ctakes.ytex.kernel.dao.
StringArrayUserType
org.apache.ctakes.core.resource.
StringIntegerMapResourceImpl
(implements org.apache.ctakes.core.resource.
StringIntegerMapResource
)
org.apache.ctakes.core.resource.
StringMapResourceImpl
(implements org.apache.ctakes.core.resource.
StringMapResource
)
org.apache.ctakes.dictionary.lookup.filter.
StringPreLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PreLookupFilter
)
org.apache.ctakes.dictionary.lookup.strtable.
StringTable
org.apache.ctakes.dictionary.lookup.strtable.
StringTableFactory
org.apache.ctakes.dictionary.lookup.strtable.
StringTableRow
org.apache.ctakes.assertion.attributes.subject.
SubjectAttributeClassifier
org.apache.ctakes.assertion.attributes.features.
SubjectFeaturesExtractor
org.apache.ctakes.drugner.fsm.machines.util.
SubSectionIndicatorFSM
(implements org.apache.ctakes.core.fsm.machine.
FSM
)
org.apache.ctakes.drugner.fsm.machines.util.
SuffixFrequencyFSM
org.apache.ctakes.drugner.fsm.machines.util.
SuffixStrengthFSM
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
SurroundingExtractor
org.apache.ctakes.ytex.svmlight.
SVMLightFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.ytex.kernel.
SVMLinFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.coreference.util.
SvmUtils
org.apache.ctakes.coreference.util.
SvmVectorCreator
org.apache.ctakes.ytex.kernel.evaluator.
SymmetricPairCacheKeyGenerator
(implements org.apache.ctakes.ytex.kernel.evaluator.
CacheKeyGenerator
)
org.apache.ctakes.temporal.ae.feature.
SyntacticParentFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.treekernel.
SyntaticSingleTreeExtractor
org.apache.ctakes.postagger.
TagDictionaryCreator
org.apache.ctakes.temporal.ae.feature.
TemporalAttributeFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
TemporalAttributeForMixEventTimeExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.pipelines.
TemporalExtractionPipeline_ImplBase
org.apache.ctakes.temporal.pipelines.
EventAndTimeExtractionPipeline
org.apache.ctakes.temporal.pipelines.
EventExtractionPipeline
org.apache.ctakes.temporal.pipelines.
FullTemporalExtractionPipeline
org.apache.ctakes.temporal.pipelines.
TimeExtractionPipeline
org.apache.ctakes.temporal.ae.feature.treekernel.
TemporalFTExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.treekernel.
TemporalPathExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.treekernel.
TemporalPETExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
TemporalPETFlatExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.coreference.eval.helpers.
Test
org.apache.ctakes.assertion.train.
TestAttributeModels
org.apache.ctakes.utils.wiki.
TestCosineSimilarity
org.apache.ctakes.preprocessor.test.
TestDriver
org.apache.ctakes.utils.test.
TestUtil
org.apache.ctakes.coreference.util.
TextMatch
org.apache.ctakes.drugner.elements.
TextMentionElement
org.apache.ctakes.core.ci.
TextModification
java.lang.Thread (implements java.lang.Runnable)
org.apache.ctakes.coreference.treekernel.training.
RowFillerThread
org.apache.ctakes.ytex.tools.
RunCPE
org.apache.ctakes.dictionary.lookup.ae.
ThreadedDictionaryLookupAnnotator.LookupDataStore
org.apache.ctakes.dictionary.lookup.ae.
ThreadedDictionaryLookupAnnotator.LookupHitKey
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
org.apache.ctakes.dictionary.lookup.
DictionaryException
org.apache.ctakes.dictionary.lookup.filter.
FilterException
org.apache.ctakes.temporal.eval.
THYMEData
org.apache.ctakes.core.fsm.machine.
TimeFSM
java.util.TimerTask (implements java.lang.Runnable)
org.apache.ctakes.dictionary.lookup2.util.
JdbcConnectionFactory.DotPlotter
org.apache.ctakes.dictionary.lookup2.util.
UmlsUserApprover.DotPlotter
org.apache.ctakes.temporal.ae.feature.
TimeWordTypeExtractor
<T>
org.apache.ctakes.temporal.ae.feature.
TimeXExtractor
org.apache.ctakes.temporal.ae.feature.
TimeXPropertyRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
TimeXRelationFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.data.analysis.
TimexTreeAlignmentStatistics
org.apache.ctakes.temporal.utils.
TLinkTypeArray2
org.apache.ctakes.temporal.utils.
TlinkTypeSet
(implements java.lang.Iterable<T>)
org.apache.ctakes.core.nlp.tokenizer.
Token
org.apache.ctakes.core.ae.
TokenConverter
org.apache.ctakes.core.fsm.token.adapter.
TokenConverter
org.apache.ctakes.relationextractor.ae.features.
TokenFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.temporal.ae.feature.
OverlappedHeadFeaturesExtractor
org.apache.ctakes.temporal.ae.feature.
UMLSBasedTokenFeaturesExtractor
org.apache.ctakes.temporal.ae.feature.
UnexpandedTokenFeaturesExtractor
org.apache.ctakes.core.nlp.tokenizer.
Tokenizer
org.apache.ctakes.core.nlp.tokenizer.
TokenizerHelper
org.apache.ctakes.core.nlp.tokenizer.
TokenizerPTB
org.apache.ctakes.dictionary.lookup2.util.
TokenMatchUtil
org.apache.ctakes.temporal.ae.feature.
TokenPropertyFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
TOP
org.apache.ctakes.coreference.type.
Pair
TOP
org.apache.ctakes.coreference.type.
MarkablePair
TOP
org.apache.ctakes.coreference.type.
BooleanLabeledFS
TOP
org.apache.ctakes.typesystem.type.refsem.
OntologyConcept
org.apache.ctakes.typesystem.type.refsem.
UmlsConcept
TOP
org.apache.ctakes.typesystem.type.refsem.
Element
org.apache.ctakes.typesystem.type.refsem.
Attribute
org.apache.ctakes.typesystem.type.refsem.
BodyLaterality
org.apache.ctakes.typesystem.type.refsem.
BodySide
org.apache.ctakes.typesystem.type.refsem.
Course
org.apache.ctakes.typesystem.type.refsem.
LabDeltaFlag
org.apache.ctakes.typesystem.type.refsem.
LabReferenceRange
org.apache.ctakes.typesystem.type.refsem.
LabValue
org.apache.ctakes.typesystem.type.refsem.
MedicationDosage
org.apache.ctakes.typesystem.type.refsem.
MedicationDuration
org.apache.ctakes.typesystem.type.refsem.
MedicationForm
org.apache.ctakes.typesystem.type.refsem.
MedicationFrequency
org.apache.ctakes.typesystem.type.refsem.
MedicationRoute
org.apache.ctakes.typesystem.type.refsem.
MedicationStatusChange
org.apache.ctakes.typesystem.type.refsem.
MedicationStrength
org.apache.ctakes.typesystem.type.refsem.
ProcedureDevice
org.apache.ctakes.typesystem.type.refsem.
ProcedureMethod
org.apache.ctakes.typesystem.type.refsem.
Severity
org.apache.ctakes.typesystem.type.refsem.
Date
org.apache.ctakes.typesystem.type.refsem.
Entity
org.apache.ctakes.typesystem.type.refsem.
AnatomicalSite
org.apache.ctakes.typesystem.type.refsem.
Event
org.apache.ctakes.typesystem.type.refsem.
DiseaseDisorder
org.apache.ctakes.typesystem.type.refsem.
Lab
org.apache.ctakes.typesystem.type.refsem.
Medication
org.apache.ctakes.typesystem.type.refsem.
Procedure
org.apache.ctakes.typesystem.type.refsem.
SignSymptom
org.apache.ctakes.typesystem.type.refsem.
Time
TOP
org.apache.ctakes.typesystem.type.refsem.
EventProperties
TOP
org.apache.ctakes.typesystem.type.relation.
Relation
org.apache.ctakes.typesystem.type.relation.
AttributeRelation
org.apache.ctakes.typesystem.type.relation.
DegreeOf
org.apache.ctakes.typesystem.type.relation.
BinaryTextRelation
org.apache.ctakes.typesystem.type.relation.
AffectsTextRelation
org.apache.ctakes.typesystem.type.relation.
AspectualTextRelation
org.apache.ctakes.typesystem.type.relation.
CausesBringsAboutTextRelation
org.apache.ctakes.typesystem.type.relation.
ComplicatesDisruptsTextRelation
org.apache.ctakes.typesystem.type.relation.
ContraindicatesTextRelation
org.apache.ctakes.typesystem.type.relation.
CoreferenceRelation
org.apache.ctakes.typesystem.type.relation.
DegreeOfTextRelation
org.apache.ctakes.typesystem.type.relation.
DiagnosesTextRelation
org.apache.ctakes.typesystem.type.relation.
IndicatesTextRelation
org.apache.ctakes.typesystem.type.relation.
IsIndicatedForTextRelation
org.apache.ctakes.typesystem.type.relation.
LocationOfTextRelation
org.apache.ctakes.typesystem.type.relation.
ManagesTreatsTextRelation
org.apache.ctakes.typesystem.type.relation.
ManifestationOfTextRelation
org.apache.ctakes.typesystem.type.relation.
PreventsTextRelation
org.apache.ctakes.typesystem.type.relation.
ResultOfTextRelation
org.apache.ctakes.typesystem.type.syntax.
StanfordDependency
org.apache.ctakes.typesystem.type.relation.
TemporalTextRelation
org.apache.ctakes.typesystem.type.relation.
UMLSRelation
org.apache.ctakes.typesystem.type.relation.
CollectionTextRelation
org.apache.ctakes.typesystem.type.relation.
ElementRelation
org.apache.ctakes.typesystem.type.relation.
Affects
org.apache.ctakes.typesystem.type.relation.
CausesBringsAbout
org.apache.ctakes.typesystem.type.relation.
ComplicatesDisrupts
org.apache.ctakes.typesystem.type.relation.
Contraindicates
org.apache.ctakes.typesystem.type.relation.
Diagnoses
org.apache.ctakes.typesystem.type.relation.
Indicates
org.apache.ctakes.typesystem.type.relation.
IsIndicatedFor
org.apache.ctakes.typesystem.type.relation.
LocationOf
org.apache.ctakes.typesystem.type.relation.
ManagesTreats
org.apache.ctakes.typesystem.type.relation.
ManifestationOf
org.apache.ctakes.typesystem.type.relation.
Prevents
org.apache.ctakes.typesystem.type.relation.
ResultOf
org.apache.ctakes.typesystem.type.relation.
TemporalRelation
org.apache.ctakes.typesystem.type.textsem.
SemanticRoleRelation
TOP
org.apache.ctakes.typesystem.type.relation.
RelationArgument
TOP
org.apache.ctakes.typesystem.type.structured.
SourceData
TOP
org.apache.ctakes.typesystem.type.structured.
Metadata
TOP
org.apache.ctakes.typesystem.type.structured.
DocumentID
TOP
org.apache.ctakes.typesystem.type.structured.
DocumentClassification
TOP
org.apache.ctakes.typesystem.type.structured.
Demographics
TOP
org.apache.ctakes.typesystem.type.syntax.
Lemma
TOP
org.apache.ctakes.typesystem.type.util.
Pairs
org.apache.ctakes.typesystem.type.util.
ProbabilityDistribution
TOP
org.apache.ctakes.typesystem.type.util.
Pair
TOP
org.apache.ctakes.ytex.uima.types.
KeyValuePair
TOP_Type
org.apache.ctakes.coreference.type.
Pair_Type
TOP_Type
org.apache.ctakes.coreference.type.
MarkablePair_Type
TOP_Type
org.apache.ctakes.coreference.type.
BooleanLabeledFS_Type
TOP_Type
org.apache.ctakes.typesystem.type.refsem.
OntologyConcept_Type
org.apache.ctakes.typesystem.type.refsem.
UmlsConcept_Type
TOP_Type
org.apache.ctakes.typesystem.type.refsem.
Element_Type
org.apache.ctakes.typesystem.type.refsem.
Attribute_Type
org.apache.ctakes.typesystem.type.refsem.
BodyLaterality_Type
org.apache.ctakes.typesystem.type.refsem.
BodySide_Type
org.apache.ctakes.typesystem.type.refsem.
Course_Type
org.apache.ctakes.typesystem.type.refsem.
LabDeltaFlag_Type
org.apache.ctakes.typesystem.type.refsem.
LabReferenceRange_Type
org.apache.ctakes.typesystem.type.refsem.
LabValue_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationDosage_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationDuration_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationForm_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationFrequency_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationRoute_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationStatusChange_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationStrength_Type
org.apache.ctakes.typesystem.type.refsem.
ProcedureDevice_Type
org.apache.ctakes.typesystem.type.refsem.
ProcedureMethod_Type
org.apache.ctakes.typesystem.type.refsem.
Severity_Type
org.apache.ctakes.typesystem.type.refsem.
Date_Type
org.apache.ctakes.typesystem.type.refsem.
Entity_Type
org.apache.ctakes.typesystem.type.refsem.
AnatomicalSite_Type
org.apache.ctakes.typesystem.type.refsem.
Event_Type
org.apache.ctakes.typesystem.type.refsem.
DiseaseDisorder_Type
org.apache.ctakes.typesystem.type.refsem.
Lab_Type
org.apache.ctakes.typesystem.type.refsem.
Medication_Type
org.apache.ctakes.typesystem.type.refsem.
Procedure_Type
org.apache.ctakes.typesystem.type.refsem.
SignSymptom_Type
org.apache.ctakes.typesystem.type.refsem.
Time_Type
TOP_Type
org.apache.ctakes.typesystem.type.refsem.
EventProperties_Type
TOP_Type
org.apache.ctakes.typesystem.type.relation.
Relation_Type
org.apache.ctakes.typesystem.type.relation.
AttributeRelation_Type
org.apache.ctakes.typesystem.type.relation.
DegreeOf_Type
org.apache.ctakes.typesystem.type.relation.
BinaryTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
AffectsTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
AspectualTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
CausesBringsAboutTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ComplicatesDisruptsTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ContraindicatesTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
CoreferenceRelation_Type
org.apache.ctakes.typesystem.type.relation.
DegreeOfTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
DiagnosesTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
IndicatesTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
IsIndicatedForTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
LocationOfTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ManagesTreatsTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ManifestationOfTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
PreventsTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ResultOfTextRelation_Type
org.apache.ctakes.typesystem.type.syntax.
StanfordDependency_Type
org.apache.ctakes.typesystem.type.relation.
TemporalTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
UMLSRelation_Type
org.apache.ctakes.typesystem.type.relation.
CollectionTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ElementRelation_Type
org.apache.ctakes.typesystem.type.relation.
Affects_Type
org.apache.ctakes.typesystem.type.relation.
CausesBringsAbout_Type
org.apache.ctakes.typesystem.type.relation.
ComplicatesDisrupts_Type
org.apache.ctakes.typesystem.type.relation.
Contraindicates_Type
org.apache.ctakes.typesystem.type.relation.
Diagnoses_Type
org.apache.ctakes.typesystem.type.relation.
Indicates_Type
org.apache.ctakes.typesystem.type.relation.
IsIndicatedFor_Type
org.apache.ctakes.typesystem.type.relation.
LocationOf_Type
org.apache.ctakes.typesystem.type.relation.
ManagesTreats_Type
org.apache.ctakes.typesystem.type.relation.
ManifestationOf_Type
org.apache.ctakes.typesystem.type.relation.
Prevents_Type
org.apache.ctakes.typesystem.type.relation.
ResultOf_Type
org.apache.ctakes.typesystem.type.relation.
TemporalRelation_Type
org.apache.ctakes.typesystem.type.textsem.
SemanticRoleRelation_Type
TOP_Type
org.apache.ctakes.typesystem.type.relation.
RelationArgument_Type
TOP_Type
org.apache.ctakes.typesystem.type.structured.
SourceData_Type
TOP_Type
org.apache.ctakes.typesystem.type.structured.
Metadata_Type
TOP_Type
org.apache.ctakes.typesystem.type.structured.
DocumentID_Type
TOP_Type
org.apache.ctakes.typesystem.type.structured.
DocumentClassification_Type
TOP_Type
org.apache.ctakes.typesystem.type.structured.
Demographics_Type
TOP_Type
org.apache.ctakes.typesystem.type.syntax.
Lemma_Type
TOP_Type
org.apache.ctakes.typesystem.type.util.
Pairs_Type
org.apache.ctakes.typesystem.type.util.
ProbabilityDistribution_Type
TOP_Type
org.apache.ctakes.typesystem.type.util.
Pair_Type
TOP_Type
org.apache.ctakes.ytex.uima.types.
KeyValuePair_Type
org.apache.ctakes.assertion.medfacts.cleartk.
TrainAssertionModel
org.apache.ctakes.assertion.train.
TrainAttributeModels
org.apache.ctakes.constituency.parser.treekernel.
TreeExtractor
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
TreeFragmentFeatureExtractor
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
AboveLeftFragmentExtractor
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
AboveRightFragmentExtractor
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
DependencyWordsFragmentExtractor
org.apache.ctakes.relationextractor.ae.features.
TreeFragmentFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.coreference.treekernel.training.
TreeKernelTrainer
(implements org.apache.ctakes.coreference.util.
ThreadDelegator
)
org.apache.ctakes.ytex.kernel.tree.
TreeMappingInfo
org.apache.ctakes.ytex.kernel.evaluator.
TreePrinter
org.apache.ctakes.constituency.parser.util.
TreeUtils
org.apache.ctakes.dictionary.lookup.filter.
TruncateCollectionFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
CollectionFilter
)
org.apache.ctakes.smokingstatus.util.
TruthValue
org.apache.ctakes.dictionary.lookup2.util.
TuiCodeUtil
org.apache.ctakes.ytex.uima.model.
UimaType
(implements java.io.Serializable)
org.apache.ctakes.ytex.umls.model.
UmlsAuiFirstWord
(implements java.io.Serializable)
org.apache.ctakes.ytex.umls.dao.
UMLSDaoImpl
(implements org.apache.ctakes.ytex.umls.dao.
UMLSDao
)
org.apache.ctakes.temporal.ae.feature.
UmlsFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>)
org.apache.ctakes.dictionary.lookup2.concept.
UmlsJdbcConceptFactory
(implements org.apache.ctakes.dictionary.lookup2.concept.
ConceptFactory
)
org.apache.ctakes.dictionary.lookup2.dictionary.
UmlsJdbcRareWordDictionary
(implements org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordDictionary
)
org.apache.ctakes.temporal.ae.feature.
UmlsSingleFeatureExtractor
org.apache.ctakes.assertion.medfacts.cleartk.extractors.
UncertaintyFeatureExtractor
UriToDocumentTextAnnotator
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.UriToDocumentTextAnnotatorCtakes
org.apache.ctakes.preprocessor.
Utility
org.apache.ctakes.relationextractor.ae.baselines.
Utils
org.apache.ctakes.relationextractor.data.analysis.
Utils
org.apache.ctakes.temporal.duration.
Utils
org.apache.ctakes.relationextractor.data.analysis.
Utils.Callback
org.apache.ctakes.temporal.duration.
Utils.Callback
org.apache.ctakes.jdl.data.xml.
Validation
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl
(implements org.apache.ctakes.dictionary.lookup.phrasebuilder.
PhraseBuilder
)
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.AttributeTextImpl
(implements org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.TextExtractor
)
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.OriginalTextImpl
(implements org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.TextExtractor
)
org.apache.ctakes.ytex.kernel.evaluator.
WeightedPolynomialMixingKernel
(implements org.apache.ctakes.ytex.kernel.evaluator.
Kernel
)
org.apache.ctakes.ytex.weka.
WekaAttributeEvaluatorImpl
(implements org.apache.ctakes.ytex.weka.
WekaAttributeEvaluator
)
org.apache.ctakes.ytex.weka.
WekaFormatterFactory
(implements org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
)
org.apache.ctakes.ytex.weka.
WekaResultsImporterImpl
(implements org.apache.ctakes.ytex.weka.
WekaResultsImporter
)
org.apache.ctakes.ytex.weka.
WekaResultsImporterImpl.ClassifierEvaluationInstanceImporter
(implements org.apache.ctakes.ytex.weka.
WekaResultInstanceImporter
)
org.apache.ctakes.utils.wiki.
WikiIndex
org.apache.ctakes.utils.distsem.
WordEmbeddings
org.apache.ctakes.relationextractor.ae.features.
WordNetFeatureExtractor
org.apache.ctakes.relationextractor.ae.features.
WordNetUtils
org.apache.ctakes.ytex.kernel.wsd.
WordSenseDisambiguatorImpl
(implements org.apache.ctakes.ytex.kernel.wsd.
WordSenseDisambiguator
)
org.apache.ctakes.utils.distsem.
WordVector
org.apache.ctakes.utils.distsem.
WordVectorReader
org.apache.ctakes.dependency.parser.ae.util.
WriteClearNLPDescriptors
org.apache.ctakes.dependency.parser.ae.util.
WriteClearNLPDescriptors.Options
org.apache.ctakes.utils.xcas_comparison.
XcasAnnotation
(implements java.lang.Cloneable, java.lang.Comparable<T>)
org.apache.ctakes.utils.xcas_comparison.
XcasDiff
org.apache.ctakes.utils.xcas_comparison.
XcasFile
(implements java.lang.Cloneable)
org.apache.ctakes.assertion.cr.
XMLReader
org.apache.ctakes.relationextractor.knowtator.
XMLReader
Interface Hierarchy
org.apache.ctakes.core.cc.
AbstractJdbcWriter.FieldInfo
org.apache.ctakes.core.cc.
AbstractJdbcWriter.TableInfo
org.apache.ctakes.ytex.kernel.
BagOfWordsDecorator
org.apache.ctakes.ytex.kernel.
BagOfWordsExporter
org.apache.ctakes.ytex.weka.
WekaBagOfWordsExporter
org.apache.ctakes.core.fsm.token.
BaseToken
org.apache.ctakes.core.fsm.token.
CharacterToken
org.apache.ctakes.core.fsm.token.
PunctuationToken
org.apache.ctakes.core.fsm.token.
SymbolToken
org.apache.ctakes.core.fsm.token.
ContractionToken
org.apache.ctakes.core.fsm.token.
DecimalToken
org.apache.ctakes.core.fsm.token.
EolToken
org.apache.ctakes.core.fsm.token.
IntegerToken
org.apache.ctakes.core.fsm.token.
NumberToken
org.apache.ctakes.core.fsm.token.
DecimalToken
org.apache.ctakes.core.fsm.token.
PunctuationToken
org.apache.ctakes.core.fsm.token.
SymbolToken
org.apache.ctakes.core.fsm.token.
TextToken
org.apache.ctakes.core.fsm.token.
WordToken
org.apache.ctakes.core.fsm.token.
WordToken
org.apache.ctakes.ytex.kernel.evaluator.
CacheKeyGenerator
org.apache.ctakes.temporal.utils.
CheckKnowtatorAnnotations.Options
org.apache.ctakes.chunker.ae.
ChunkCreator
org.apache.ctakes.ytex.kernel.dao.
ClassifierEvaluationDao
org.apache.ctakes.ytex.kernel.
ClassifierEvaluationParser
org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionCreator
<V,T>
org.apache.ctakes.dictionary.lookup.filter.
CollectionFilter
org.apache.ctakes.temporal.data.analysis.
CompareFeatureStructures.Options
org.apache.ctakes.ytex.kernel.dao.
ConceptDao
org.apache.ctakes.dictionary.lookup2.concept.
ConceptFactory
org.apache.ctakes.ytex.web.search.
ConceptSearchService
org.apache.ctakes.ytex.ws.
ConceptSimilarityRestService
org.apache.ctakes.ytex.kernel.metric.
ConceptSimilarityService
org.apache.ctakes.ytex.ws.
ConceptSimilarityWebService
org.apache.ctakes.smokingstatus.
Const
org.apache.ctakes.necontexts.
ContextAnalyzer
org.apache.ctakes.necontexts.
ContextHitConsumer
org.apache.ctakes.ytex.kernel.evaluator.
CorpusKernelEvaluator
org.apache.ctakes.ytex.kernel.
CytoscapeHelper
org.apache.ctakes.dictionary.lookup.
Dictionary
org.apache.ctakes.dictionary.lookup2.util.
DictionarySpec
org.apache.ctakes.ytex.uima.dao.
DocumentDao
org.apache.ctakes.ytex.uima.mapper.
DocumentMapperService
org.apache.ctakes.ytex.uima.mapper.
DocumentMapperServiceImpl.ChunkPreparedStatementSetter
<T>
org.apache.ctakes.ytex.web.search.
DocumentSearchService
org.apache.ctakes.drugner.
DrugModel
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.Options
org.apache.ctakes.temporal.eval.
EvaluationOfBothEEAndETRelations.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfClearTKRelations.EvalOptions
org.apache.ctakes.temporal.eval.
EvaluationOfEventEventThymeRelations.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfEventProperties.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfEventSpans.Options
org.apache.ctakes.temporal.eval.
EvaluationOfEventTimeRelations.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfI2B2TemporalRelations.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfMetaTimeExpressionExtractor.MetaOptions
org.apache.ctakes.temporal.eval.
EvaluationOfSelfEventTimeRelations.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfTemporalRelations_ImplBase.TempRelOptions
org.apache.ctakes.temporal.eval.
EvaluationOfTimeSpans.Options
org.apache.ctakes.relationextractor.data.analysis.
EventAndEntityViewer.Options
org.apache.ctakes.temporal.data.analysis.
EventContextAnalysisPipeline.Options
org.apache.ctakes.temporal.duration.
EventEventDurationStatistics.Options
org.apache.ctakes.temporal.data.analysis.
EventPrinterPipeline.Options
org.apache.ctakes.temporal.pipelines.
EventPrintingPipeline.Options
org.apache.ctakes.temporal.duration.
EventTimeDurationStatistics.Options
org.apache.ctakes.temporal.duration.
ExtractDurationsUsingContainsRelation.Options
org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraint
org.apache.ctakes.core.resource.
FileResource
org.apache.ctakes.ytex.kernel.
FoldGenerator
org.apache.ctakes.core.fsm.machine.
FSM
org.apache.ctakes.relationextractor.data.analysis.
GoldRelationViewer.Options
org.apache.ctakes.temporal.data.analysis.
GoldRelationViewer.Options
org.apache.ctakes.ytex.weka.
GramMatrixExporter
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluator
org.apache.ctakes.ytex.kernel.
InfoContentEvaluator
org.apache.ctakes.ytex.sparsematrix.
InstanceDataExporter
org.apache.ctakes.ytex.kernel.tree.
InstanceTreeBuilder
org.apache.ctakes.ytex.kernel.
IntrinsicInfoContentEvaluator
java.lang.Iterable<T>
org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T> (also extends java.util.Map<K,V>)
org.apache.ctakes.dictionary.lookup2.ae.
JCasTermAnnotator
org.apache.ctakes.core.resource.
JdbcConnectionResource
org.apache.ctakes.ytex.kernel.evaluator.
Kernel
org.apache.ctakes.ytex.kernel.dao.
KernelEvaluationDao
org.apache.ctakes.ytex.kernel.
KernelUtil
org.apache.ctakes.ytex.libsvm.
LibSVMGramMatrixExporter
org.apache.ctakes.ytex.libsvm.
LibSVMUtil
org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotation
org.apache.ctakes.dictionary.lookup.vo.
LookupToken
org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
org.apache.ctakes.core.resource.
LuceneIndexReaderResource
org.apache.ctakes.lvg.resource.
LvgCmdApiResource
java.util.Map<K,V>
org.apache.ctakes.dictionary.lookup2.util.collection.
CollectionMap
<K,V,T> (also extends java.lang.Iterable<T>)
org.apache.ctakes.dictionary.lookup.
MetaDataHit
org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
org.apache.ctakes.ytex.uima.dao.
NamedEntityRegexDao
org.apache.ctakes.ytex.uima.annotators.
NegexAnnotator.TargetAnnoFilter
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.ae.
OverlapAnnotator.Action
org.apache.ctakes.ytex.kernel.pagerank.
PageRankService
org.apache.ctakes.constituency.parser.
ParserWrapper
org.apache.ctakes.dictionary.lookup.phrasebuilder.
PhraseBuilder
org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
org.apache.ctakes.dictionary.lookup.filter.
PreLookupFilter
org.apache.ctakes.preprocessor.
PreProcessor
org.apache.ctakes.temporal.data.analysis.
PrintFailedTimeNormalizations.Options
org.apache.ctakes.temporal.data.analysis.
PrintInconsistentAnnotations.Options
org.apache.ctakes.temporal.eval.
PrintRelations.Options
org.apache.ctakes.dictionary.lookup2.dictionary.
RareWordDictionary
org.apache.ctakes.temporal.data.analysis.
RelationContextViewerPipeline.Options
org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
<T1,T2>
org.apache.ctakes.ytex.R.
RGramMatrixExporter
org.apache.ctakes.temporal.utils.
RunCorpusDiagnostics.Options
org.apache.ctakes.ytex.uima.dao.
SegmentRegexDao
org.apache.ctakes.relationextractor.eval.
SHARPXMI.Options
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain.Options
org.apache.ctakes.relationextractor.eval.
SHARPXMI.EvaluationOptions
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain.Options
org.apache.ctakes.ytex.kernel.metric.
SimilarityMetric
org.apache.ctakes.ytex.kernel.
SparseDataExporter
org.apache.ctakes.ytex.kernel.
SparseDataFormatter
org.apache.ctakes.ytex.kernel.
SparseDataFormatterFactory
org.apache.ctakes.core.resource.
StringIntegerMapResource
org.apache.ctakes.core.resource.
StringMapResource
org.apache.ctakes.core.resource.
StringsResource
org.apache.ctakes.temporal.pipelines.
TemporalExtractionPipeline_ImplBase.Options
org.apache.ctakes.temporal.pipelines.
EventAndTimeExtractionPipeline.ETOptions
org.apache.ctakes.temporal.pipelines.
EventExtractionPipeline.EventOptions
org.apache.ctakes.temporal.pipelines.
FullTemporalExtractionPipeline.FullOptions
org.apache.ctakes.temporal.pipelines.
TimeExtractionPipeline.TimexOptions
org.apache.ctakes.dictionary.lookup2.consumer.
TermConsumer
org.apache.ctakes.core.ci.
TextModifier
org.apache.ctakes.dictionary.lookup2.textspan.
TextSpan
org.apache.ctakes.coreference.util.
ThreadDelegator
org.apache.ctakes.temporal.ae.
THYMEKnowtatorXMLReader.Options
org.apache.ctakes.temporal.utils.
TimeRelationConstants
org.apache.ctakes.temporal.data.analysis.
TimexTreeAlignmentStatistics.Options
org.apache.ctakes.ytex.umls.dao.
UMLSDao
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.TextExtractor
org.apache.ctakes.ytex.weka.
WekaAttributeEvaluator
org.apache.ctakes.ytex.weka.
WekaResultInstanceImporter
org.apache.ctakes.ytex.weka.
WekaResultsImporter
org.apache.ctakes.dictionary.lookup2.ae.
WindowProcessor
org.apache.ctakes.ytex.kernel.wsd.
WordSenseDisambiguator
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
org.apache.ctakes.assertion.attributes.features.selection.
MutualInformationFeatureSelection.CombineScoreMethod
org.apache.ctakes.assertion.cc.
JudgeAttributeInstances.Selector
org.apache.ctakes.assertion.eval.
AssertionEvaluation.Corpus
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionCleartkAnalysisEngine.FEATURE_CONFIG
org.apache.ctakes.assertion.pipelines.
SharpCorpusSplit.Subcorpus
org.apache.ctakes.assertion.pipelines.
GenerateTreeRepresentation.ATTRIBUTE
org.apache.ctakes.core.cc.
JdbcWriterTemplate.I2b2FieldInfo
(implements org.apache.ctakes.core.cc.
AbstractJdbcWriter.FieldInfo
)
org.apache.ctakes.coreference.eval.helpers.
PairType
org.apache.ctakes.coreference.eval.helpers.
MatType
org.apache.ctakes.coreference.eval.helpers.
KAlphaType
org.apache.ctakes.coreference.eval.helpers.
CEAFType
org.apache.ctakes.coreference.eval.helpers.
B3Type
org.apache.ctakes.dictionary.lookup.vo.
LookupTokenComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.dictionary.lookup2.concept.
ConceptCode
org.apache.ctakes.dictionary.lookup2.dictionary.
JdbcRareWordDictionary.FIELD_INDEX
org.apache.ctakes.dictionary.lookup2.util.
UmlsUserApprover
org.apache.ctakes.dictionary.lookup2.util.
JdbcConnectionFactory
org.apache.ctakes.relationextractor.eval.
SHARPXMI.EvaluateOn
org.apache.ctakes.temporal.ae.
THYMETreebankReader.TOKEN_TYPE
org.apache.ctakes.temporal.ae.feature.selection.
MutualInformationFeatureSelection.CombineScoreMethod
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.XMLFormat
org.apache.ctakes.temporal.eval.
Evaluation_ImplBase.Subcorpus
org.apache.ctakes.temporal.utils.
TlinkType
org.apache.ctakes.temporal.utils.
AnnotationIdCollection.ArgComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.ytex.kernel.
SparseDataExporter.ScopeEnum
org.apache.ctakes.ytex.kernel.
ImputedFeatureEvaluator.MeasureType
org.apache.ctakes.ytex.kernel.
ClassifierEvaluationParser.ParseOption
org.apache.ctakes.ytex.kernel.metric.
ConceptSimilarityService.SimilarityMetricEnum
org.apache.ctakes.ytex.weka.
GramMatrixExporterImpl.GramMatrixType
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