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Package Hierarchies:
edu.mayo.bmi.lookup.type
,
org.apache.ctakes.assertion.attributes
,
org.apache.ctakes.assertion.attributes.generic
,
org.apache.ctakes.assertion.attributes.subject
,
org.apache.ctakes.assertion.eval
,
org.apache.ctakes.assertion.medfacts
,
org.apache.ctakes.assertion.medfacts.cleartk
,
org.apache.ctakes.assertion.medfacts.i2b2.api
,
org.apache.ctakes.assertion.medfacts.types
,
org.apache.ctakes.chunker.ae
,
org.apache.ctakes.chunker.ae.adjuster
,
org.apache.ctakes.clinicalpipeline.ae
,
org.apache.ctakes.constituency.parser
,
org.apache.ctakes.constituency.parser.ae
,
org.apache.ctakes.constituency.parser.treekernel
,
org.apache.ctakes.constituency.parser.uima.co
,
org.apache.ctakes.constituency.parser.uima.type
,
org.apache.ctakes.constituency.parser.util
,
org.apache.ctakes.contexttokenizer.ae
,
org.apache.ctakes.core.ae
,
org.apache.ctakes.core.cc
,
org.apache.ctakes.core.ci
,
org.apache.ctakes.core.cr
,
org.apache.ctakes.core.fsm.adapters
,
org.apache.ctakes.core.fsm.condition
,
org.apache.ctakes.core.fsm.machine
,
org.apache.ctakes.core.fsm.output
,
org.apache.ctakes.core.fsm.state
,
org.apache.ctakes.core.fsm.token
,
org.apache.ctakes.core.fsm.token.adapter
,
org.apache.ctakes.core.knowtator
,
org.apache.ctakes.core.nlp.tokenizer
,
org.apache.ctakes.core.resource
,
org.apache.ctakes.core.sentence
,
org.apache.ctakes.core.util
,
org.apache.ctakes.coreference.ae
,
org.apache.ctakes.coreference.cc
,
org.apache.ctakes.coreference.eval.helpers
,
org.apache.ctakes.coreference.treekernel.training
,
org.apache.ctakes.coreference.type
,
org.apache.ctakes.coreference.util
,
org.apache.ctakes.dependency.parser
,
org.apache.ctakes.dependency.parser.ae
,
org.apache.ctakes.dependency.parser.ae.util
,
org.apache.ctakes.dependency.parser.cr
,
org.apache.ctakes.dependency.parser.util
,
org.apache.ctakes.dictionary.lookup
,
org.apache.ctakes.dictionary.lookup.ae
,
org.apache.ctakes.dictionary.lookup.algorithms
,
org.apache.ctakes.dictionary.lookup.filter
,
org.apache.ctakes.dictionary.lookup.jdbc
,
org.apache.ctakes.dictionary.lookup.lucene
,
org.apache.ctakes.dictionary.lookup.phrasebuilder
,
org.apache.ctakes.dictionary.lookup.strtable
,
org.apache.ctakes.dictionary.lookup.vo
,
org.apache.ctakes.drugner
,
org.apache.ctakes.drugner.ae
,
org.apache.ctakes.drugner.ae.impl
,
org.apache.ctakes.drugner.cc
,
org.apache.ctakes.drugner.elements
,
org.apache.ctakes.drugner.fsm.elements.conditions
,
org.apache.ctakes.drugner.fsm.machines.elements
,
org.apache.ctakes.drugner.fsm.machines.util
,
org.apache.ctakes.drugner.fsm.output.elements
,
org.apache.ctakes.drugner.fsm.output.util
,
org.apache.ctakes.drugner.fsm.states.util
,
org.apache.ctakes.drugner.type
,
org.apache.ctakes.lvg.ae
,
org.apache.ctakes.lvg.resource
,
org.apache.ctakes.necontexts
,
org.apache.ctakes.necontexts.negation
,
org.apache.ctakes.necontexts.status
,
org.apache.ctakes.padtermspotter.ae
,
org.apache.ctakes.padtermspotter.cc
,
org.apache.ctakes.padtermspotter.cr
,
org.apache.ctakes.padtermspotter.fsm.output
,
org.apache.ctakes.padtermspotter.fsm.pad.machine
,
org.apache.ctakes.padtermspotter.impl
,
org.apache.ctakes.padtermspotter.type
,
org.apache.ctakes.padtermspotter.util
,
org.apache.ctakes.postagger
,
org.apache.ctakes.postagger.test
,
org.apache.ctakes.preprocessor
,
org.apache.ctakes.preprocessor.ae
,
org.apache.ctakes.preprocessor.test
,
org.apache.ctakes.relationextractor.ae
,
org.apache.ctakes.relationextractor.ae.features
,
org.apache.ctakes.relationextractor.cr
,
org.apache.ctakes.relationextractor.data
,
org.apache.ctakes.relationextractor.eval
,
org.apache.ctakes.relationextractor.knowtator
,
org.apache.ctakes.relationextractor.pipelines
,
org.apache.ctakes.sideeffect.ae
,
org.apache.ctakes.sideeffect.cc
,
org.apache.ctakes.sideeffect.type
,
org.apache.ctakes.sideeffect.util
,
org.apache.ctakes.smokingstatus
,
org.apache.ctakes.smokingstatus.ae
,
org.apache.ctakes.smokingstatus.cc
,
org.apache.ctakes.smokingstatus.context
,
org.apache.ctakes.smokingstatus.context.negation
,
org.apache.ctakes.smokingstatus.i2b2.type
,
org.apache.ctakes.smokingstatus.lookup.ae
,
org.apache.ctakes.smokingstatus.machine
,
org.apache.ctakes.smokingstatus.MLutil
,
org.apache.ctakes.smokingstatus.patientLevel
,
org.apache.ctakes.smokingstatus.type
,
org.apache.ctakes.smokingstatus.type.libsvm
,
org.apache.ctakes.smokingstatus.util
,
org.apache.ctakes.typesystem.type.constants
,
org.apache.ctakes.typesystem.type.refsem
,
org.apache.ctakes.typesystem.type.relation
,
org.apache.ctakes.typesystem.type.structured
,
org.apache.ctakes.typesystem.type.syntax
,
org.apache.ctakes.typesystem.type.textsem
,
org.apache.ctakes.typesystem.type.textspan
,
org.apache.ctakes.typesystem.type.util
,
org.apache.ctakes.utils.build
,
org.apache.ctakes.utils.env
,
org.apache.ctakes.utils.kernel
,
org.apache.ctakes.utils.test
,
org.apache.ctakes.utils.tree
,
org.apache.ctakes.utils.xcas_comparison
Class Hierarchy
java.lang.Object
org.apache.ctakes.coreference.util.
AbstractClassifier
java.util.AbstractCollection<E> (implements java.util.Collection<E>)
java.util.AbstractList<E> (implements java.util.List<E>)
java.util.AbstractSequentialList<E>
java.util.LinkedList<E> (implements java.lang.Cloneable, java.util.Deque<E>, java.util.List<E>, java.io.Serializable)
org.apache.ctakes.dependency.parser.util.
DependencyPath
org.apache.uima.analysis_component.AnalysisComponent_ImplBase (implements org.apache.uima.analysis_component.AnalysisComponent)
org.apache.uima.analysis_component.Annotator_ImplBase
org.apache.uima.analysis_component.JCasAnnotator_ImplBase
org.apache.ctakes.assertion.medfacts.
AssertionAnalysisEngine
org.apache.ctakes.preprocessor.ae.
CdaCasInitializer
org.apache.ctakes.chunker.ae.adjuster.
ChunkAdjuster
org.apache.ctakes.chunker.ae.
Chunker
org.apache.ctakes.smokingstatus.ae.
ClassifiableEntries
org.apache.ctakes.assertion.medfacts.
ConceptConverterAnalysisEngine
org.apache.ctakes.constituency.parser.ae.
ConstituencyParser
org.apache.ctakes.necontexts.
ContextAnnotator
org.apache.ctakes.contexttokenizer.ae.
ContextDependentTokenizerAnnotator
org.apache.ctakes.core.ae.
CopyAnnotator
org.apache.ctakes.drugner.ae.
CopyDrugAnnotator
org.apache.ctakes.dictionary.lookup.ae.
DictionaryLookupAnnotator
org.apache.ctakes.dictionary.lookup.ae.
UmlsDictionaryLookupAnnotator
org.apache.ctakes.drugner.ae.
DrugMentionAnnotator
org.apache.ctakes.clinicalpipeline.ae.
ExtractionPrepAnnotator
org.apache.ctakes.core.ae.
FilterAnnotator
org.uimafit.component.JCasAnnotator_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.OnlyGoldAssertions
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.ReferenceAnnotationsSystemAssertionClearer
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.ReferenceIdentifiedAnnotationsSystemToGoldCopier
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.ReferenceSupportingAnnotationsSystemToGoldCopier
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.ReplaceCTakesEntityMentionsAndModifiersWithGold
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.ReplaceGoldEntityMentionsAndModifiersWithCTakes
org.apache.ctakes.dependency.parser.ae.
ClearParserDependencyParserAE
org.apache.ctakes.dependency.parser.ae.
ClearParserSemanticRoleLabelerAE
org.cleartk.classifier.CleartkAnnotator<OUTCOME_TYPE> (implements org.uimafit.factory.initializable.Initializable)
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionCleartkAnalysisEngine
org.apache.ctakes.relationextractor.ae.
ModifierExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
DegreeOfRelationExtractorAnnotator
org.apache.ctakes.relationextractor.ae.
EntityMentionPairRelationExtractorAnnotator
org.apache.ctakes.assertion.attributes.
GenericAttributeAnalysisEngine
org.apache.ctakes.relationextractor.cr.
GoldEntityAndRelationReader
org.apache.ctakes.relationextractor.cr.
GoldEntityReader
org.apache.ctakes.relationextractor.eval.
ModifierExtractorEvaluation.OnlyGoldModifiers
org.apache.ctakes.relationextractor.eval.
PreprocessAndWriteXmi.CopyDocumentTextToGoldView
org.apache.ctakes.relationextractor.eval.
PreprocessAndWriteXmi.DocumentIDAnnotator
org.apache.ctakes.relationextractor.eval.
PreprocessAndWriteXmi.SerializeDocumentToXMI
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorConsumer
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.ReplaceCTakesEntityMentionsAndModifiersWithGold
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.ReplaceGoldEntityMentionsAndModifiersWithCTakes
org.apache.ctakes.core.ae.
SHARPKnowtatorXMLReader
org.apache.ctakes.assertion.attributes.
SubjectAttributeAnalysisEngine
org.apache.ctakes.dependency.parser.ae.util.
TestClearParserAnalysisEngines.DumpClearParserOutputAE
org.apache.ctakes.smokingstatus.ae.
KuRuleBasedClassifierAnnotator
org.apache.ctakes.dependency.parser.ae.
LemAssigner
org.apache.ctakes.lvg.ae.
LvgAnnotator
org.apache.ctakes.lvg.ae.
LvgBaseTokenAnnotator
org.apache.ctakes.coreference.ae.
MipacqMarkableCreator
org.apache.ctakes.coreference.ae.
MipacqMarkableExpander
org.apache.ctakes.coreference.ae.
MipacqMarkablePairGenerator
org.apache.ctakes.coreference.ae.
MipacqSvmChainCreator
org.apache.ctakes.core.ae.
NullAnnotator
org.apache.ctakes.core.ae.
OverlapAnnotator
org.apache.ctakes.padtermspotter.ae.
PADHitAnnotator
org.apache.ctakes.constituency.parser.ae.
ParserEvaluationAnnotator
org.apache.ctakes.smokingstatus.ae.
PcsClassifierAnnotator_libsvm
org.apache.ctakes.dependency.parser.ae.
PosAssigner
org.apache.ctakes.postagger.
POSTagger
org.apache.ctakes.sideeffect.ae.
PSESentenceAnnotator
org.apache.ctakes.core.ae.
SectionSegmentAnnotator
org.apache.ctakes.smokingstatus.ae.
SentenceAdjuster
org.apache.ctakes.core.ae.
SentenceDetector
org.apache.ctakes.sideeffect.ae.
SESentenceFeatureAnnotator
org.apache.ctakes.sideeffect.ae.
SideEffectAnnotator
org.apache.ctakes.core.ae.
SimpleSegmentAnnotator
org.apache.ctakes.core.ae.
SimpleSegmentWithTagsAnnotator
org.apache.ctakes.padtermspotter.ae.
SubSectionAnnotator
org.apache.ctakes.core.ae.
TokenizerAnnotator
org.apache.ctakes.core.ae.
TokenizerAnnotatorPTB
org.apache.ctakes.preprocessor.
Annotation
org.apache.ctakes.coreference.util.
AnnotationCounter
org.apache.ctakes.coreference.util.
AnnotationSelector
org.apache.ctakes.constituency.parser.util.
AnnotationTreeUtils
org.apache.uima.analysis_engine.annotator.Annotator_ImplBase (implements org.apache.uima.analysis_engine.annotator.BaseAnnotator)
org.apache.uima.analysis_engine.annotator.JTextAnnotator_ImplBase (implements org.apache.uima.analysis_engine.annotator.JTextAnnotator)
org.apache.ctakes.sideeffect.ae.
SESentenceClassifierAnnotator
org.apache.ctakes.coreference.util.
AnnotOffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.relationextractor.knowtator.
ArgumentInfo
org.apache.ctakes.relationextractor.ae.features.
ArgumentOrderFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
junit.framework.Assert
junit.framework.TestCase (implements junit.framework.Test)
org.apache.ctakes.preprocessor.
ClinicalNotePreProcessorTest
org.apache.ctakes.assertion.medfacts.cleartk.
AssertionComponents
org.apache.ctakes.drugner.elements.
AssociatedCodeElement
org.apache.ctakes.drugner.elements.
AssociatedPrimaryCodeElement
org.apache.ctakes.drugner.elements.
AssociatedSecondaryCodeElement
org.apache.ctakes.coreference.util.
AttributeCalculator
org.apache.ctakes.coreference.util.
AnaphoricityAttributeCalculator
org.apache.ctakes.coreference.util.
PairAttributeCalculator
org.apache.ctakes.coreference.util.
SyntaxAttributeCalculator
org.apache.ctakes.dictionary.lookup.
BaseDictionaryImpl
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.jdbc.
JdbcDictionaryImpl
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.lucene.
LuceneDictionaryImpl
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.strtable.
StringTableDictionaryImpl
(implements org.apache.ctakes.dictionary.lookup.
Dictionary
)
org.apache.ctakes.dictionary.lookup.ae.
BaseLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
NamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.smokingstatus.lookup.ae.
NonSmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
OrangeBookFilterConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.padtermspotter.impl.
PADConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.padtermspotter.impl.
PADLocationConsumerImpl
org.apache.ctakes.padtermspotter.impl.
PADTermConsumerImpl
org.apache.ctakes.smokingstatus.lookup.ae.
SmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedDbConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.ae.
UmlsToSnomedLuceneConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.smokingstatus.lookup.ae.
UnknownSmokerNamedEntityLookupConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.dictionary.lookup.
BaseMetaDataHitImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.dictionary.lookup.
GenericMetaDataHitImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.dictionary.lookup.lucene.
LuceneDocumentMetaDataHitImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.dictionary.lookup.strtable.
StringTableRowMetaDataHitImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHit
)
org.apache.ctakes.core.fsm.adapters.
BaseTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.core.fsm.adapters.
CharacterTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
CharacterToken
)
org.apache.ctakes.core.fsm.adapters.
NewlineTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
EolToken
)
org.apache.ctakes.core.fsm.adapters.
PunctuationTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
PunctuationToken
)
org.apache.ctakes.core.fsm.adapters.
SymbolTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
SymbolToken
)
org.apache.ctakes.core.fsm.adapters.
ContractionTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
ContractionToken
)
org.apache.ctakes.core.fsm.adapters.
NumberTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
NumberToken
)
org.apache.ctakes.core.fsm.adapters.
DecimalTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
DecimalToken
)
org.apache.ctakes.core.fsm.adapters.
IntegerTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
IntegerToken
)
org.apache.ctakes.core.fsm.adapters.
TextTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
TextToken
)
org.apache.ctakes.core.fsm.adapters.
WordTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
WordToken
)
org.apache.ctakes.core.fsm.token.adapter.
BaseTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.core.fsm.token.adapter.
CharacterTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
CharacterToken
)
org.apache.ctakes.core.fsm.token.adapter.
PunctuationTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
PunctuationToken
)
org.apache.ctakes.core.fsm.token.adapter.
NumberTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
NumberToken
)
org.apache.ctakes.core.fsm.token.adapter.
DecimalTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
DecimalToken
)
org.apache.ctakes.core.fsm.token.adapter.
IntegerTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
IntegerToken
)
org.apache.ctakes.core.fsm.token.adapter.
WordTokenAdapter
(implements org.apache.ctakes.core.fsm.token.
WordToken
)
org.apache.ctakes.core.fsm.output.
BaseTokenImpl
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.necontexts.
ContextHit
org.apache.ctakes.core.fsm.output.
DateToken
org.apache.ctakes.core.fsm.output.
FractionToken
org.apache.ctakes.padtermspotter.fsm.output.
IllnessDxIndicator
org.apache.ctakes.core.fsm.output.
MeasurementToken
org.apache.ctakes.core.fsm.output.
NegationIndicator
org.apache.ctakes.drugner.fsm.output.util.
NonIndicator
org.apache.ctakes.core.fsm.output.
PersonTitleToken
org.apache.ctakes.core.fsm.output.
RangeToken
org.apache.ctakes.core.fsm.output.
RomanNumeralToken
org.apache.ctakes.core.fsm.output.
StatusIndicator
org.apache.ctakes.padtermspotter.fsm.output.
SubSectionIndicator
org.apache.ctakes.drugner.fsm.output.util.
SubSectionIndicator
org.apache.ctakes.core.fsm.output.
TimeToken
org.apache.ctakes.drugner.fsm.output.elements.
BaseTokenImpl
(implements org.apache.ctakes.core.fsm.token.
BaseToken
)
org.apache.ctakes.drugner.fsm.output.elements.
AssociatedCodeToken
org.apache.ctakes.drugner.fsm.output.elements.
ConfidenceScoreToken
org.apache.ctakes.drugner.fsm.output.util.
DecimalStrengthToken
org.apache.ctakes.drugner.fsm.output.elements.
DosageToken
org.apache.ctakes.drugner.fsm.output.elements.
DrugChangeStatusToken
org.apache.ctakes.drugner.fsm.output.elements.
DurationToken
org.apache.ctakes.drugner.fsm.output.elements.
FormToken
org.apache.ctakes.drugner.fsm.output.util.
FractionStrengthToken
org.apache.ctakes.drugner.fsm.output.util.
FractionToken
org.apache.ctakes.drugner.fsm.output.elements.
FrequencyToken
org.apache.ctakes.drugner.fsm.output.elements.
FrequencyUnitToken
org.apache.ctakes.drugner.fsm.output.util.
HyphenatedDrugToken
org.apache.ctakes.drugner.fsm.output.util.
RangeStrengthToken
org.apache.ctakes.drugner.fsm.output.util.
RangeToken
org.apache.ctakes.drugner.fsm.output.elements.
RouteToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthUnitCombinedToken
org.apache.ctakes.drugner.fsm.output.elements.
StrengthUnitToken
org.apache.ctakes.drugner.fsm.output.util.
SuffixFrequencyToken
org.apache.ctakes.drugner.fsm.output.util.
SuffixStrengthToken
org.apache.ctakes.utils.build.
BuildPear
org.apache.ctakes.utils.build.
BuildPipelinePears
org.apache.ctakes.core.cc.
CASConsumerTestDriver
org.apache.ctakes.assertion.medfacts.
CasIndexer
<T>
org.apache.ctakes.relationextractor.data.
CategoricalDistribution
org.apache.ctakes.assertion.medfacts.i2b2.api.
CharacterOffsetToLineTokenConverterCtakesImpl
(implements org.mitre.medfacts.zoner.CharacterOffsetToLineTokenConverter)
org.apache.ctakes.smokingstatus.util.
ClassifiableEntry
org.apache.ctakes.dependency.parser.ae.
ClearParserUtil
org.apache.ctakes.constituency.parser.util.
CommandLineParserUtil
org.apache.ctakes.utils.xcas_comparison.
Compare
org.apache.ctakes.assertion.medfacts.
ConceptLookup
net.openai.util.fsm.Condition (implements java.io.Serializable)
org.apache.ctakes.core.fsm.condition.
CombineCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
ContainsSetTextValueCondition
org.apache.ctakes.core.fsm.condition.
DayNightWordCondition
org.apache.ctakes.core.fsm.condition.
DecimalCondition
org.apache.ctakes.core.fsm.condition.
DecimalRangeCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
DecimalStrengthStatusCondition
org.apache.ctakes.core.fsm.condition.
DecimalValueCondition
org.apache.ctakes.core.fsm.condition.
DisjoinCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
DosageCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
DrugChangeStatusCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
FormCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
FractionCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
FractionStrengthCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
FrequencyUnitCondition
org.apache.ctakes.core.fsm.condition.
HourMinuteCondition
org.apache.ctakes.core.fsm.condition.
IntegerCondition
org.apache.ctakes.core.fsm.condition.
IntegerRangeCondition
org.apache.ctakes.core.fsm.condition.
IntegerValueCondition
org.apache.ctakes.core.fsm.condition.
NegateCondition
org.apache.ctakes.core.fsm.condition.
NumberCondition
org.apache.ctakes.core.fsm.condition.
PunctuationValueCondition
org.apache.ctakes.core.fsm.condition.
RangeCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
RangeDosageCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
RangeStrengthCondition
org.apache.ctakes.core.fsm.condition.
RomanNumeralCondition
org.apache.ctakes.core.fsm.machine.
RomanNumeralFSM.RomanNumeralCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
RouteCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthUnitCombinedCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
StrengthUnitCondition
org.apache.ctakes.core.fsm.condition.
SymbolValueCondition
org.apache.ctakes.core.fsm.condition.
TextSetCondition
org.apache.ctakes.core.fsm.condition.
TextValueCondition
org.apache.ctakes.drugner.fsm.elements.conditions.
TimeCondition
org.apache.ctakes.core.fsm.condition.
WordSetCondition
org.apache.ctakes.core.fsm.condition.
WordValueCondition
org.apache.ctakes.drugner.elements.
ConfidenceScoreElement
org.apache.ctakes.utils.xcas_comparison.
Const
org.apache.ctakes.typesystem.type.constants.
CONST
org.apache.ctakes.relationextractor.cr.
Constants
org.apache.ctakes.relationextractor.data.
Constants
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructor
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructorFindContainedBy
org.apache.ctakes.assertion.medfacts.i2b2.api.
ConstraintConstructorFindContainedWithin
org.apache.ctakes.necontexts.
ContextAnalyzerAdapter
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.drugner.ae.impl.
NegContextInitializerImpl
org.apache.ctakes.necontexts.
ContextAnnotatorTests
org.apache.ctakes.necontexts.
ContextHitConsumerAdapter
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.core.nlp.tokenizer.
ContractionResult
org.apache.ctakes.core.nlp.tokenizer.
ContractionsPTB
org.apache.ctakes.utils.xcas_comparison.
ConvertAndCompare
org.apache.ctakes.assertion.medfacts.
Converti2b2AnnotationsToCTAKES
org.apache.ctakes.assertion.medfacts.
ConvertXMIAssertionsToi2b2Format
org.apache.ctakes.coreference.util.
CorefConsts
org.apache.ctakes.postagger.test.
CpeTests.StatusCallbackListenerImpl
(implements org.apache.uima.collection.StatusCallbackListener)
org.apache.ctakes.core.fsm.machine.
DateFSM
org.apache.ctakes.core.util.
DateParser
org.apache.ctakes.dictionary.lookup.ae.
DebugConsumerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
)
org.apache.ctakes.drugner.fsm.machines.elements.
DecimalStrengthFSM
org.apache.ctakes.chunker.ae.
DefaultChunkCreator
(implements org.apache.ctakes.chunker.ae.
ChunkCreator
)
org.xml.sax.helpers.DefaultHandler (implements org.xml.sax.ContentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
org.apache.ctakes.preprocessor.
ClinicalNotePreProcessor
(implements org.apache.ctakes.preprocessor.
PreProcessor
)
org.apache.ctakes.utils.xcas_comparison.
XcasProcessor
org.apache.ctakes.dependency.parser.util.
Delim
org.apache.ctakes.relationextractor.ae.features.
DependencyParseUtils
org.apache.ctakes.relationextractor.ae.features.
DependencyPathFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.dependency.parser.util.
DependencyRegex
org.apache.ctakes.relationextractor.ae.features.
DependencyTreeFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.dependency.parser.util.
DependencyUtility
org.apache.ctakes.dependency.parser.util.
ClearDependencyUtility
org.apache.ctakes.dictionary.lookup.
DictionaryEngine
org.apache.ctakes.dictionary.lookup.ae.
DirectLookupInitializerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
)
org.apache.ctakes.dictionary.lookup.algorithms.
DirectPassThroughImpl
(implements org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
)
org.apache.ctakes.core.util.
DocumentIDAnnotationUtil
org.apache.ctakes.preprocessor.
DocumentMetaData
org.apache.ctakes.core.util.
DocumentSection
org.apache.ctakes.drugner.elements.
DosageElement
org.apache.ctakes.drugner.fsm.machines.elements.
DosagesFSM
org.apache.ctakes.drugner.elements.
DrugChangeStatusElement
org.apache.ctakes.drugner.fsm.machines.elements.
DrugChangeStatusFSM
org.apache.ctakes.drugner.
DrugMention
(implements org.apache.ctakes.drugner.
DrugModel
)
org.apache.ctakes.preprocessor.
DTDloader
(implements org.xml.sax.EntityResolver)
org.apache.ctakes.drugner.elements.
DurationElement
org.apache.ctakes.drugner.fsm.machines.elements.
DurationFSM
org.apache.ctakes.padtermspotter.fsm.pad.machine.
DxIndicatorFSM
org.apache.ctakes.coreference.util.
EditDistance
org.apache.ctakes.core.sentence.
EndOfSentenceScannerImpl
(implements opennlp.tools.sentdetect.EndOfSentenceScanner)
org.apache.ctakes.relationextractor.ae.features.
EntitySpanFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.utils.env.
EnvironmentVariable
org.cleartk.eval.Evaluation_ImplBase<ITEM_TYPE,STATS_TYPE>
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier
org.apache.ctakes.relationextractor.eval.
ModifierExtractorEvaluation
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation
org.apache.uima.cas.impl.FeatureStructureImpl (implements java.lang.Cloneable, org.apache.uima.cas.FeatureStructure)
org.apache.uima.jcas.cas.TOP
org.apache.uima.jcas.cas.AnnotationBase (implements org.apache.uima.cas.AnnotationBaseFS)
org.apache.uima.jcas.tcas.Annotation (implements org.apache.uima.cas.text.AnnotationFS)
org.apache.ctakes.assertion.medfacts.types.
Assertion
org.apache.ctakes.smokingstatus.type.libsvm.
AttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
DateAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
NominalAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
NumericAttributeValue
org.apache.ctakes.smokingstatus.type.libsvm.
StringAttributeValue
org.apache.ctakes.typesystem.type.syntax.
BaseToken
org.apache.ctakes.typesystem.type.syntax.
ContractionToken
org.apache.ctakes.typesystem.type.syntax.
NewlineToken
org.apache.ctakes.typesystem.type.syntax.
NumToken
org.apache.ctakes.typesystem.type.syntax.
PunctuationToken
org.apache.ctakes.typesystem.type.syntax.
SymbolToken
org.apache.ctakes.typesystem.type.syntax.
WordToken
org.apache.ctakes.constituency.parser.uima.type.
BooleanLabeledTree
org.apache.ctakes.typesystem.type.syntax.
Chunk
org.apache.ctakes.typesystem.type.syntax.
ADJP
org.apache.ctakes.typesystem.type.syntax.
ADVP
org.apache.ctakes.typesystem.type.syntax.
CONJP
org.apache.ctakes.typesystem.type.syntax.
INTJ
org.apache.ctakes.typesystem.type.syntax.
LST
org.apache.ctakes.typesystem.type.syntax.
NP
org.apache.ctakes.typesystem.type.syntax.
O
org.apache.ctakes.typesystem.type.syntax.
PP
org.apache.ctakes.typesystem.type.syntax.
PRT
org.apache.ctakes.typesystem.type.syntax.
SBAR
org.apache.ctakes.typesystem.type.syntax.
UCP
org.apache.ctakes.typesystem.type.syntax.
VP
org.apache.ctakes.drugner.type.
ChunkAnnotation
org.apache.ctakes.assertion.medfacts.types.
Concept
org.apache.ctakes.typesystem.type.syntax.
ConllDependencyNode
org.apache.ctakes.drugner.type.
DecimalStrengthAnnotation
org.apache.ctakes.smokingstatus.type.libsvm.
DocumentID
org.apache.ctakes.drugner.type.
DosagesAnnotation
org.apache.ctakes.drugner.type.
DrugChangeStatusAnnotation
org.apache.ctakes.typesystem.type.textspan.
DrugLookupWindowAnnotation
org.apache.ctakes.drugner.type.
DrugMentionAnnotation
org.apache.ctakes.drugner.type.
DurationAnnotation
org.apache.ctakes.drugner.type.
FormAnnotation
org.apache.ctakes.drugner.type.
FractionStrengthAnnotation
org.apache.ctakes.drugner.type.
FrequencyAnnotation
org.apache.ctakes.drugner.type.
FrequencyUnitAnnotation
org.apache.ctakes.typesystem.type.textsem.
IdentifiedAnnotation
org.apache.ctakes.typesystem.type.textsem.
ContextAnnotation
org.apache.ctakes.typesystem.type.textsem.
DateAnnotation
org.apache.ctakes.typesystem.type.textsem.
EntityMention
org.apache.ctakes.typesystem.type.textsem.
EventMention
org.apache.ctakes.typesystem.type.textsem.
MedicationEventMention
org.apache.ctakes.typesystem.type.textsem.
FractionAnnotation
org.apache.ctakes.typesystem.type.textsem.
MeasurementAnnotation
org.apache.ctakes.typesystem.type.textsem.
Modifier
org.apache.ctakes.smokingstatus.type.
NonSmokerNamedEntityAnnotation
org.apache.ctakes.padtermspotter.type.
PADHit
org.apache.ctakes.padtermspotter.type.
PADLocation
org.apache.ctakes.padtermspotter.type.
PADTerm
org.apache.ctakes.typesystem.type.textsem.
PersonTitleAnnotation
org.apache.ctakes.typesystem.type.textsem.
RangeAnnotation
org.apache.ctakes.typesystem.type.textsem.
RomanNumeralAnnotation
org.apache.ctakes.smokingstatus.type.
SmokerNamedEntityAnnotation
org.apache.ctakes.typesystem.type.textsem.
TimeAnnotation
org.apache.ctakes.typesystem.type.textsem.
TimeMention
org.apache.ctakes.smokingstatus.type.
UnknownSmokerNamedEntityAnnotation
org.apache.ctakes.typesystem.type.textspan.
List
org.apache.ctakes.typesystem.type.textspan.
LookupWindowAnnotation
org.apache.ctakes.coreference.type.
Markable
org.apache.ctakes.coreference.type.
DemMarkable
org.apache.ctakes.coreference.type.
NEMarkable
org.apache.ctakes.coreference.type.
PronounMarkable
org.apache.ctakes.coreference.type.
MarkablePairSet
edu.mayo.bmi.lookup.type.
MetaHeader
org.apache.ctakes.typesystem.type.textspan.
Paragraph
org.apache.ctakes.typesystem.type.textsem.
Predicate
org.apache.ctakes.sideeffect.type.
PSESentence
org.apache.ctakes.sideeffect.type.
PSESentenceFeature
org.apache.ctakes.drugner.type.
RangeStrengthAnnotation
org.apache.ctakes.smokingstatus.i2b2.type.
RecordSentence
org.apache.ctakes.drugner.type.
RouteAnnotation
org.apache.ctakes.typesystem.type.textspan.
Segment
org.apache.ctakes.typesystem.type.textsem.
SemanticArgument
org.apache.ctakes.typesystem.type.textspan.
Sentence
org.apache.ctakes.sideeffect.type.
SESentence
org.apache.ctakes.sideeffect.type.
SideEffectAnnotation
org.apache.ctakes.smokingstatus.type.
SmokingDocumentClassification
org.apache.ctakes.drugner.type.
StrengthAnnotation
org.apache.ctakes.drugner.type.
StrengthUnitAnnotation
org.apache.ctakes.padtermspotter.type.
SubSection
org.apache.ctakes.drugner.type.
SubSectionAnnotation
org.apache.ctakes.drugner.type.
SuffixStrengthAnnotation
org.apache.ctakes.typesystem.type.syntax.
TreebankNode
org.apache.ctakes.typesystem.type.syntax.
TerminalTreebankNode
org.apache.ctakes.typesystem.type.syntax.
TopTreebankNode
org.apache.ctakes.coreference.type.
BooleanLabeledFS
org.apache.ctakes.typesystem.type.structured.
Demographics
org.apache.ctakes.typesystem.type.structured.
DocumentID
org.apache.ctakes.typesystem.type.refsem.
Element
org.apache.ctakes.typesystem.type.refsem.
Attribute
org.apache.ctakes.typesystem.type.refsem.
BodyLaterality
org.apache.ctakes.typesystem.type.refsem.
BodySide
org.apache.ctakes.typesystem.type.refsem.
Course
org.apache.ctakes.typesystem.type.refsem.
LabDeltaFlag
org.apache.ctakes.typesystem.type.refsem.
LabReferenceRange
org.apache.ctakes.typesystem.type.refsem.
LabValue
org.apache.ctakes.typesystem.type.refsem.
MedicationDosage
org.apache.ctakes.typesystem.type.refsem.
MedicationDuration
org.apache.ctakes.typesystem.type.refsem.
MedicationForm
org.apache.ctakes.typesystem.type.refsem.
MedicationFrequency
org.apache.ctakes.typesystem.type.refsem.
MedicationRoute
org.apache.ctakes.typesystem.type.refsem.
MedicationStatusChange
org.apache.ctakes.typesystem.type.refsem.
MedicationStrength
org.apache.ctakes.typesystem.type.refsem.
ProcedureDevice
org.apache.ctakes.typesystem.type.refsem.
ProcedureMethod
org.apache.ctakes.typesystem.type.refsem.
Severity
org.apache.ctakes.typesystem.type.refsem.
Date
org.apache.ctakes.typesystem.type.refsem.
Entity
org.apache.ctakes.typesystem.type.refsem.
AnatomicalSite
org.apache.ctakes.typesystem.type.refsem.
Event
org.apache.ctakes.typesystem.type.refsem.
DiseaseDisorder
org.apache.ctakes.typesystem.type.refsem.
Lab
org.apache.ctakes.typesystem.type.refsem.
Medication
org.apache.ctakes.typesystem.type.refsem.
Procedure
org.apache.ctakes.typesystem.type.refsem.
SignSymptom
org.apache.ctakes.typesystem.type.refsem.
Time
org.apache.ctakes.typesystem.type.refsem.
EventProperties
org.apache.ctakes.typesystem.type.syntax.
Lemma
org.apache.ctakes.coreference.type.
MarkablePair
org.apache.ctakes.typesystem.type.structured.
Metadata
org.apache.ctakes.typesystem.type.refsem.
OntologyConcept
org.apache.ctakes.typesystem.type.refsem.
UmlsConcept
org.apache.ctakes.typesystem.type.util.
Pair
org.apache.ctakes.coreference.type.
Pair
org.apache.ctakes.typesystem.type.util.
Pairs
org.apache.ctakes.typesystem.type.util.
ProbabilityDistribution
org.apache.ctakes.typesystem.type.relation.
Relation
org.apache.ctakes.typesystem.type.relation.
AttributeRelation
org.apache.ctakes.typesystem.type.relation.
DegreeOf
org.apache.ctakes.typesystem.type.relation.
BinaryTextRelation
org.apache.ctakes.typesystem.type.relation.
CoreferenceRelation
org.apache.ctakes.typesystem.type.syntax.
StanfordDependency
org.apache.ctakes.typesystem.type.relation.
UMLSRelation
org.apache.ctakes.typesystem.type.relation.
CollectionTextRelation
org.apache.ctakes.typesystem.type.relation.
ElementRelation
org.apache.ctakes.typesystem.type.relation.
Affects
org.apache.ctakes.typesystem.type.relation.
LocationOf
org.apache.ctakes.typesystem.type.relation.
ManifestationOf
org.apache.ctakes.typesystem.type.relation.
ResultOf
org.apache.ctakes.typesystem.type.relation.
TemporalRelation
org.apache.ctakes.typesystem.type.textsem.
SemanticRoleRelation
org.apache.ctakes.typesystem.type.relation.
RelationArgument
org.apache.ctakes.typesystem.type.structured.
SourceData
org.apache.ctakes.coreference.util.
FeatureVector
org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraintImpl
(implements org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraint
)
org.apache.ctakes.core.resource.
FileLocator
org.apache.ctakes.core.resource.
FileResourceImpl
(implements org.apache.ctakes.core.resource.
FileResource
, org.apache.uima.resource.SharedResourceObject)
org.apache.ctakes.dictionary.lookup.ae.
FirstTokenPermLookupInitializerImpl
(implements org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
)
org.apache.ctakes.dictionary.lookup.algorithms.
FirstTokenPermutationImpl
(implements org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
)
org.apache.ctakes.drugner.elements.
FormElement
org.apache.ctakes.drugner.fsm.machines.elements.
FormFSM
org.apache.ctakes.core.fsm.machine.
FractionFSM
org.apache.ctakes.drugner.fsm.machines.elements.
FractionStrengthFSM
org.apache.ctakes.utils.tree.
FragmentUtils
org.apache.ctakes.drugner.elements.
FrequencyElement
org.apache.ctakes.drugner.fsm.machines.elements.
FrequencyFSM
org.apache.ctakes.drugner.elements.
FrequencyUnitElement
org.apache.ctakes.drugner.fsm.machines.elements.
FrequencyUnitFSM
org.apache.ctakes.coreference.util.
FSIteratorToList
org.apache.ctakes.core.util.
FSUtil
org.apache.ctakes.smokingstatus.MLutil.
GenerateTrainingData
org.apache.ctakes.assertion.attributes.generic.
GenericAttributeClassifier
org.apache.ctakes.relationextractor.pipelines.
GoldEntityAndRelationReaderPipeline
org.apache.ctakes.coreference.util.
GoldStandardLabeler
org.apache.ctakes.coreference.util.
HobbsTreeNavigator
org.apache.ctakes.core.cc.
HtmlTableCasConsumer.AnnotationLengthComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.core.cc.
HtmlTableCasConsumer.AnnotationPositionComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.drugner.fsm.machines.util.
HyphenatedDrugFSM
org.apache.ctakes.core.nlp.tokenizer.
HyphenatedPTB
org.apache.ctakes.core.ci.
HyphenTextModifierImpl
(implements org.apache.ctakes.core.ci.
TextModifier
)
org.apache.ctakes.core.ci.
HyphenTextModifierImplTests
org.apache.ctakes.utils.build.
InstallPearSilently
org.apache.ctakes.utils.build.
InstallPearSilently.RunInstallation
(implements java.lang.Runnable)
org.apache.ctakes.utils.build.
InstallPipelineFromPears
org.apache.ctakes.preprocessor.
IntegerRange
org.apache.ctakes.padtermspotter.util.
JCasUtil
org.apache.ctakes.core.util.
JCasUtil
org.apache.ctakes.core.resource.
JdbcConnectionResourceImpl
(implements org.apache.ctakes.core.resource.
JdbcConnectionResource
, org.apache.uima.resource.SharedResourceObject)
org.apache.ctakes.utils.kernel.
Kernel
org.apache.ctakes.utils.kernel.
PolyKernel
org.apache.ctakes.utils.kernel.
LinearKernel
org.apache.ctakes.utils.kernel.
RBFKernel
org.apache.ctakes.constituency.parser.treekernel.
TreeKernel
org.apache.ctakes.coreference.treekernel.training.
KernelMatrixCompositor
org.apache.ctakes.core.knowtator.
KnowtatorAnnotation
org.apache.ctakes.core.knowtator.
KnowtatorAnnotation.Span
org.apache.ctakes.core.knowtator.
KnowtatorXMLParser
org.apache.ctakes.coreference.treekernel.training.
LinearKernelMatrixWriter
(implements org.apache.ctakes.coreference.util.
ThreadDelegator
)
org.apache.ctakes.core.resource.
LinesFromFileStringsResourceImpl
(implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.
StringsResource
)
org.apache.ctakes.core.util.
ListFactory
org.apache.ctakes.dictionary.lookup.ae.
LookupAnnotationToJCasAdapter
(implements org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotation
, org.apache.ctakes.dictionary.lookup.vo.
LookupToken
)
org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotationToTokAdapter
(implements org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotation
, org.apache.ctakes.dictionary.lookup.vo.
LookupToken
)
org.apache.ctakes.dictionary.lookup.vo.
LookupHit
org.apache.ctakes.dictionary.lookup.ae.
LookupParseUtilities
org.apache.ctakes.dictionary.lookup.ae.
LookupSpec
org.apache.ctakes.dictionary.lookup.vo.
LookupTokenComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.core.resource.
LuceneIndexReaderResourceImpl
(implements org.apache.ctakes.core.resource.
LuceneIndexReaderResource
, org.apache.uima.resource.SharedResourceObject)
org.apache.ctakes.lvg.ae.
LvgAnnotator.LemmaLocalClass
org.apache.ctakes.lvg.ae.
LvgBaseTokenAnnotator.LemmaLocalClass
org.apache.ctakes.lvg.resource.
LvgCmdApiResourceImpl
(implements org.apache.ctakes.lvg.resource.
LvgCmdApiResource
, org.apache.uima.resource.SharedResourceObject)
org.apache.ctakes.relationextractor.cr.
Mapper
org.apache.ctakes.coreference.util.
MarkableDepUtils
org.apache.ctakes.coreference.ae.
MarkableProb
org.apache.ctakes.coreference.util.
MarkableTreeUtils
org.apache.ctakes.constituency.parser.
MaxentParserWrapper
(implements org.apache.ctakes.constituency.parser.
ParserWrapper
)
org.apache.ctakes.core.fsm.machine.
MeasurementFSM
org.apache.ctakes.dictionary.lookup.
MetaDataHitComparator
(implements java.util.Comparator<T>, org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
)
org.apache.ctakes.dictionary.lookup.filter.
MetaDataPostLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.necontexts.
NamedEntityContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.padtermspotter.impl.
DxContextAnalyzerImpl
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.necontexts.negation.
NegationContextAnalyzer
org.apache.ctakes.padtermspotter.impl.
NegativeContextAnalyzerImpl
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.necontexts.status.
StatusContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.smokingstatus.context.
NamedEntityContextAnalyzer
(implements org.apache.ctakes.necontexts.
ContextAnalyzer
)
org.apache.ctakes.smokingstatus.context.negation.
NegationContextAnalyzer
org.apache.ctakes.necontexts.
NamedEntityContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.padtermspotter.impl.
DxContextHitConsumerImpl
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.necontexts.negation.
NegationContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.padtermspotter.impl.
NegativeContextHitConsumerImpl
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.necontexts.status.
StatusContextHitConsumer
(implements org.apache.ctakes.necontexts.
ContextHitConsumer
)
org.apache.ctakes.relationextractor.ae.features.
NamedEntityFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.relationextractor.ae.
NamedEntityFeaturesExtractorTest
org.apache.ctakes.necontexts.
NegationAnnotatorTests
org.apache.ctakes.smokingstatus.machine.
NegationFSM
org.apache.ctakes.core.fsm.machine.
NegationFSM
org.apache.ctakes.padtermspotter.fsm.pad.machine.
NegDxIndicatorFSM
org.apache.ctakes.drugner.fsm.machines.util.
NegIndicatorFSM
(implements org.apache.ctakes.core.fsm.machine.
FSM
)
org.apache.ctakes.drugner.fsm.machines.util.
NonIndicatorFSM
org.apache.ctakes.core.nlp.tokenizer.
OffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.postagger.test.
OpenNLPPOSCollectionReaderTests
org.cleartk.util.Options_ImplBase
org.apache.ctakes.assertion.eval.
AssertionEvalBasedOnModifier.Options
org.apache.ctakes.relationextractor.eval.
ModifierExtractorEvaluation.Options
org.apache.ctakes.relationextractor.eval.
PreprocessAndWriteXmi.Options
org.apache.ctakes.relationextractor.eval.
PrintRelationStatistics.Options
org.apache.ctakes.relationextractor.pipelines.
RelationAnnotationAnalysis.Options
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipeline.Options
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain.Options
org.apache.ctakes.dependency.parser.ae.util.
TestClearParserAnalysisEngines.Options
org.apache.ctakes.dependency.parser.ae.util.
WriteClearParserDescriptors.Options
org.apache.ctakes.core.ae.
OverlapAnnotator.DeleteActionImpl
(implements org.apache.ctakes.core.ae.
OverlapAnnotator.Action
)
org.apache.ctakes.core.ae.
OverlapAnnotator.ModifyActionImpl
(implements org.apache.ctakes.core.ae.
OverlapAnnotator.Action
)
org.apache.ctakes.padtermspotter.ae.
PADHitAnnotator.HitComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.core.util.
ParamUtil
org.apache.ctakes.coreference.util.
ParentPtrTree
org.apache.ctakes.relationextractor.ae.features.
PartOfSpeechFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.smokingstatus.patientLevel.
PatientLevelSmokingStatus
org.apache.ctakes.sideeffect.util.
PatternMatch
org.apache.ctakes.dictionary.lookup.algorithms.
PermutationUtil
org.apache.ctakes.core.fsm.machine.
PersonTitleFSM
org.apache.ctakes.relationextractor.ae.features.
PhraseChunkingExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.chunker.ae.
PhraseTypeChunkCreator
(implements org.apache.ctakes.chunker.ae.
ChunkCreator
)
org.apache.ctakes.postagger.test.
POSTaggerTests
org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilterGroupImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.relationextractor.ae.features.
PrepositionFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.relationextractor.eval.
PreprocessAndWriteXmi
org.apache.ctakes.relationextractor.eval.
PrintRelationStatistics
org.apache.ctakes.relationextractor.ae.features.
PunctuationFeatureExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.core.fsm.machine.
RangeFSM
org.apache.ctakes.drugner.fsm.machines.elements.
RangeStrengthFSM
org.apache.ctakes.relationextractor.pipelines.
RelationAnnotationAnalysis
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotator.HashableArguments
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotator.IdentifiedAnnotationPair
org.apache.ctakes.relationextractor.ae.
RelationExtractorAnnotatorsTest
org.apache.ctakes.relationextractor.eval.
RelationExtractorEvaluation.ParameterSettings
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipeline
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorPipelineSingleCas
org.apache.ctakes.relationextractor.pipelines.
RelationExtractorTrain
org.apache.ctakes.relationextractor.knowtator.
RelationInfo
org.apache.ctakes.smokingstatus.ae.
ResolutionAnnotator
org.apache.uima.resource.Resource_ImplBase (implements org.apache.uima.resource.Resource)
org.apache.uima.resource.ConfigurableResource_ImplBase (implements org.apache.uima.resource.ConfigurableResource)
org.apache.uima.collection.CasConsumer_ImplBase (implements org.apache.uima.collection.CasConsumer)
org.apache.ctakes.core.cc.
CasConsumer
org.apache.ctakes.drugner.cc.
ConsumeNamedEntityRecordModel
org.apache.ctakes.dependency.parser.
DependencyNodeWriter
org.apache.ctakes.core.cc.
FilesInDirectoryCasConsumer
org.apache.ctakes.core.cc.
HtmlTableCasConsumer
org.apache.ctakes.core.cc.
NormalizedFilesInDirectoryCasConsumer
org.apache.ctakes.coreference.cc.
ODIEVectorFileWriter
org.apache.ctakes.padtermspotter.cc.
PADOffSetsRecord
(implements org.apache.ctakes.core.cc.
NonTerminalConsumer
)
org.apache.ctakes.constituency.parser.uima.co.
ParserTreeWriterConsumer
org.apache.ctakes.padtermspotter.cc.
RadialogyTermLookup
(implements org.apache.ctakes.core.cc.
NonTerminalConsumer
)
org.apache.ctakes.smokingstatus.cc.
RecordResolutionCasConsumer
org.apache.ctakes.sideeffect.cc.
SideEffectCasConsumer
org.apache.ctakes.sideeffect.cc.
SideEffectSentenceCasConsumer
org.apache.ctakes.core.cc.
TokenFreqCasConsumer
org.apache.ctakes.core.cc.
TokenOffsetsCasConsumer
org.apache.uima.collection.CollectionReader_ImplBase (implements org.apache.uima.collection.CollectionReader)
org.apache.ctakes.dependency.parser.cr.
DependencyFileCollectionReader
org.apache.ctakes.core.cr.
FilesInDirectoryCollectionReader
org.apache.ctakes.core.cr.
FilesInDirectoryCollectionCyclicalReads
org.uimafit.component.JCasCollectionReader_ImplBase
org.apache.ctakes.dependency.parser.ae.util.
XMIReader
org.apache.ctakes.assertion.eval.
XMIReader
org.apache.ctakes.relationextractor.eval.
XMIReader
org.apache.ctakes.core.cr.
JdbcCollectionReader
org.apache.ctakes.core.cr.
LinesFromFileCollectionReader
org.apache.ctakes.postagger.
OpenNLPPOSCollectionReader
org.apache.ctakes.padtermspotter.cr.
RadiologyRecordsCollectionReader
org.apache.ctakes.core.fsm.machine.
RomanNumeralFSM
org.apache.ctakes.drugner.elements.
RouteElement
org.apache.ctakes.drugner.fsm.machines.elements.
RouteFSM
org.apache.ctakes.preprocessor.
SegmentMetaData
org.apache.ctakes.core.sentence.
SentenceDetectorCtakes
org.apache.ctakes.core.sentence.
SentenceSpan
org.apache.ctakes.dictionary.lookup.filter.
SetValuePostLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
, org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
)
org.apache.ctakes.sideeffect.util.
SEUtil
org.apache.ctakes.core.ae.
SimpleSegmentAnnotatorTests
org.apache.ctakes.utils.tree.
SimpleTree
org.mitre.medfacts.i2b2.api.SingleDocumentProcessor
org.apache.ctakes.assertion.medfacts.i2b2.api.
SingleDocumentProcessorCtakes
org.apache.ctakes.coreference.eval.helpers.
Span
org.apache.ctakes.relationextractor.knowtator.
Span
org.apache.ctakes.coreference.eval.helpers.
SpanAlignment
org.apache.ctakes.coreference.eval.helpers.
SpanOffsetComparator
(implements java.util.Comparator<T>)
org.apache.ctakes.relationextractor.data.
Splitter
org.apache.ctakes.dependency.parser.util.
SRLUtility
org.apache.ctakes.drugner.elements.
StartDateElement
net.openai.util.fsm.State (implements java.io.Serializable)
org.apache.ctakes.core.fsm.state.
NamedState
org.apache.ctakes.drugner.fsm.states.util.
IndentStartState
org.apache.ctakes.core.fsm.state.
NonTerminalEndState
org.apache.ctakes.relationextractor.data.
Stats
org.apache.ctakes.necontexts.
StatusAnnotatorTests
org.apache.ctakes.core.fsm.machine.
StatusIndicatorFSM
org.apache.ctakes.drugner.fsm.machines.util.
StatusIndicatorFSM
org.apache.ctakes.drugner.elements.
StrengthElement
org.apache.ctakes.drugner.fsm.machines.elements.
StrengthFSM
org.apache.ctakes.drugner.elements.
StrengthUnitElement
org.apache.ctakes.drugner.fsm.machines.elements.
StrengthUnitFSM
org.apache.ctakes.core.resource.
StringIntegerMapResourceImpl
(implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.
StringIntegerMapResource
)
org.apache.ctakes.core.resource.
StringMapResourceImpl
(implements org.apache.uima.resource.SharedResourceObject, org.apache.ctakes.core.resource.
StringMapResource
)
org.apache.ctakes.dictionary.lookup.filter.
StringPreLookupFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
PreLookupFilter
)
org.apache.ctakes.dictionary.lookup.strtable.
StringTable
org.apache.ctakes.dictionary.lookup.strtable.
StringTableFactory
org.apache.ctakes.dictionary.lookup.strtable.
StringTableRow
org.apache.ctakes.assertion.attributes.subject.
SubjectAttributeClassifier
org.apache.ctakes.drugner.fsm.machines.util.
SubSectionIndicatorFSM
(implements org.apache.ctakes.core.fsm.machine.
FSM
)
org.apache.ctakes.padtermspotter.fsm.pad.machine.
SubSectionPadIdFSM
org.apache.ctakes.drugner.fsm.machines.util.
SuffixFrequencyFSM
org.apache.ctakes.core.resource.
SuffixMaxentModelResourceImpl
(implements org.apache.ctakes.core.resource.
MaxentModelResource
, org.apache.uima.resource.SharedResourceObject)
org.apache.ctakes.drugner.fsm.machines.util.
SuffixStrengthFSM
org.apache.ctakes.coreference.util.
SvmUtils
org.apache.ctakes.coreference.util.
SvmVectorCreator
org.apache.ctakes.postagger.
TagDictionaryCreator
org.apache.ctakes.postagger.test.
TagDictionaryCreatorTests
org.apache.ctakes.coreference.eval.helpers.
Test
org.apache.ctakes.dependency.parser.ae.util.
TestClearParserAnalysisEngines
org.apache.ctakes.preprocessor.test.
TestDriver
org.apache.ctakes.utils.test.
TestUtil
org.apache.ctakes.coreference.util.
TextMatch
org.apache.ctakes.drugner.elements.
TextMentionElement
org.apache.ctakes.core.ci.
TextModification
java.lang.Thread (implements java.lang.Runnable)
org.apache.ctakes.postagger.test.
CpeTests
org.apache.ctakes.coreference.treekernel.training.
RowFillerThread
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
org.apache.ctakes.dictionary.lookup.
DictionaryException
org.apache.ctakes.dictionary.lookup.filter.
FilterException
org.apache.ctakes.core.fsm.machine.
TimeFSM
org.apache.ctakes.core.nlp.tokenizer.
Token
org.apache.ctakes.core.ae.
TokenConverter
org.apache.ctakes.core.fsm.token.adapter.
TokenConverter
org.apache.ctakes.relationextractor.ae.features.
TokenFeaturesExtractor
(implements org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
)
org.apache.ctakes.core.nlp.tokenizer.
Tokenizer
org.apache.ctakes.core.ae.
TokenizerAnnotatorPTBTests
org.apache.ctakes.core.nlp.tokenizer.
TokenizerHelper
org.apache.ctakes.core.nlp.tokenizer.
TokenizerPTB
org.apache.uima.jcas.cas.TOP_Type
org.apache.uima.jcas.cas.AnnotationBase_Type
org.apache.uima.jcas.tcas.Annotation_Type
org.apache.ctakes.assertion.medfacts.types.
Assertion_Type
org.apache.ctakes.smokingstatus.type.libsvm.
AttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
DateAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
NominalAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
NumericAttributeValue_Type
org.apache.ctakes.smokingstatus.type.libsvm.
StringAttributeValue_Type
org.apache.ctakes.typesystem.type.syntax.
BaseToken_Type
org.apache.ctakes.typesystem.type.syntax.
ContractionToken_Type
org.apache.ctakes.typesystem.type.syntax.
NewlineToken_Type
org.apache.ctakes.typesystem.type.syntax.
NumToken_Type
org.apache.ctakes.typesystem.type.syntax.
PunctuationToken_Type
org.apache.ctakes.typesystem.type.syntax.
SymbolToken_Type
org.apache.ctakes.typesystem.type.syntax.
WordToken_Type
org.apache.ctakes.constituency.parser.uima.type.
BooleanLabeledTree_Type
org.apache.ctakes.typesystem.type.syntax.
Chunk_Type
org.apache.ctakes.typesystem.type.syntax.
ADJP_Type
org.apache.ctakes.typesystem.type.syntax.
ADVP_Type
org.apache.ctakes.typesystem.type.syntax.
CONJP_Type
org.apache.ctakes.typesystem.type.syntax.
INTJ_Type
org.apache.ctakes.typesystem.type.syntax.
LST_Type
org.apache.ctakes.typesystem.type.syntax.
NP_Type
org.apache.ctakes.typesystem.type.syntax.
O_Type
org.apache.ctakes.typesystem.type.syntax.
PP_Type
org.apache.ctakes.typesystem.type.syntax.
PRT_Type
org.apache.ctakes.typesystem.type.syntax.
SBAR_Type
org.apache.ctakes.typesystem.type.syntax.
UCP_Type
org.apache.ctakes.typesystem.type.syntax.
VP_Type
org.apache.ctakes.drugner.type.
ChunkAnnotation_Type
org.apache.ctakes.assertion.medfacts.types.
Concept_Type
org.apache.ctakes.typesystem.type.syntax.
ConllDependencyNode_Type
org.apache.ctakes.drugner.type.
DecimalStrengthAnnotation_Type
org.apache.ctakes.smokingstatus.type.libsvm.
DocumentID_Type
org.apache.ctakes.drugner.type.
DosagesAnnotation_Type
org.apache.ctakes.drugner.type.
DrugChangeStatusAnnotation_Type
org.apache.ctakes.typesystem.type.textspan.
DrugLookupWindowAnnotation_Type
org.apache.ctakes.drugner.type.
DrugMentionAnnotation_Type
org.apache.ctakes.drugner.type.
DurationAnnotation_Type
org.apache.ctakes.drugner.type.
FormAnnotation_Type
org.apache.ctakes.drugner.type.
FractionStrengthAnnotation_Type
org.apache.ctakes.drugner.type.
FrequencyAnnotation_Type
org.apache.ctakes.drugner.type.
FrequencyUnitAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
IdentifiedAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
ContextAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
DateAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
EntityMention_Type
org.apache.ctakes.typesystem.type.textsem.
EventMention_Type
org.apache.ctakes.typesystem.type.textsem.
MedicationEventMention_Type
org.apache.ctakes.typesystem.type.textsem.
FractionAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
MeasurementAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
Modifier_Type
org.apache.ctakes.smokingstatus.type.
NonSmokerNamedEntityAnnotation_Type
org.apache.ctakes.padtermspotter.type.
PADHit_Type
org.apache.ctakes.padtermspotter.type.
PADLocation_Type
org.apache.ctakes.padtermspotter.type.
PADTerm_Type
org.apache.ctakes.typesystem.type.textsem.
PersonTitleAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
RangeAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
RomanNumeralAnnotation_Type
org.apache.ctakes.smokingstatus.type.
SmokerNamedEntityAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
TimeAnnotation_Type
org.apache.ctakes.typesystem.type.textsem.
TimeMention_Type
org.apache.ctakes.smokingstatus.type.
UnknownSmokerNamedEntityAnnotation_Type
org.apache.ctakes.typesystem.type.textspan.
List_Type
org.apache.ctakes.typesystem.type.textspan.
LookupWindowAnnotation_Type
org.apache.ctakes.coreference.type.
Markable_Type
org.apache.ctakes.coreference.type.
DemMarkable_Type
org.apache.ctakes.coreference.type.
NEMarkable_Type
org.apache.ctakes.coreference.type.
PronounMarkable_Type
org.apache.ctakes.coreference.type.
MarkablePairSet_Type
edu.mayo.bmi.lookup.type.
MetaHeader_Type
org.apache.ctakes.typesystem.type.textspan.
Paragraph_Type
org.apache.ctakes.typesystem.type.textsem.
Predicate_Type
org.apache.ctakes.sideeffect.type.
PSESentence_Type
org.apache.ctakes.sideeffect.type.
PSESentenceFeature_Type
org.apache.ctakes.drugner.type.
RangeStrengthAnnotation_Type
org.apache.ctakes.smokingstatus.i2b2.type.
RecordSentence_Type
org.apache.ctakes.drugner.type.
RouteAnnotation_Type
org.apache.ctakes.typesystem.type.textspan.
Segment_Type
org.apache.ctakes.typesystem.type.textsem.
SemanticArgument_Type
org.apache.ctakes.typesystem.type.textspan.
Sentence_Type
org.apache.ctakes.sideeffect.type.
SESentence_Type
org.apache.ctakes.sideeffect.type.
SideEffectAnnotation_Type
org.apache.ctakes.smokingstatus.type.
SmokingDocumentClassification_Type
org.apache.ctakes.drugner.type.
StrengthAnnotation_Type
org.apache.ctakes.drugner.type.
StrengthUnitAnnotation_Type
org.apache.ctakes.padtermspotter.type.
SubSection_Type
org.apache.ctakes.drugner.type.
SubSectionAnnotation_Type
org.apache.ctakes.drugner.type.
SuffixStrengthAnnotation_Type
org.apache.ctakes.typesystem.type.syntax.
TreebankNode_Type
org.apache.ctakes.typesystem.type.syntax.
TerminalTreebankNode_Type
org.apache.ctakes.typesystem.type.syntax.
TopTreebankNode_Type
org.apache.ctakes.coreference.type.
BooleanLabeledFS_Type
org.apache.ctakes.typesystem.type.structured.
Demographics_Type
org.apache.ctakes.typesystem.type.structured.
DocumentID_Type
org.apache.ctakes.typesystem.type.refsem.
Element_Type
org.apache.ctakes.typesystem.type.refsem.
Attribute_Type
org.apache.ctakes.typesystem.type.refsem.
BodyLaterality_Type
org.apache.ctakes.typesystem.type.refsem.
BodySide_Type
org.apache.ctakes.typesystem.type.refsem.
Course_Type
org.apache.ctakes.typesystem.type.refsem.
LabDeltaFlag_Type
org.apache.ctakes.typesystem.type.refsem.
LabReferenceRange_Type
org.apache.ctakes.typesystem.type.refsem.
LabValue_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationDosage_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationDuration_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationForm_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationFrequency_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationRoute_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationStatusChange_Type
org.apache.ctakes.typesystem.type.refsem.
MedicationStrength_Type
org.apache.ctakes.typesystem.type.refsem.
ProcedureDevice_Type
org.apache.ctakes.typesystem.type.refsem.
ProcedureMethod_Type
org.apache.ctakes.typesystem.type.refsem.
Severity_Type
org.apache.ctakes.typesystem.type.refsem.
Date_Type
org.apache.ctakes.typesystem.type.refsem.
Entity_Type
org.apache.ctakes.typesystem.type.refsem.
AnatomicalSite_Type
org.apache.ctakes.typesystem.type.refsem.
Event_Type
org.apache.ctakes.typesystem.type.refsem.
DiseaseDisorder_Type
org.apache.ctakes.typesystem.type.refsem.
Lab_Type
org.apache.ctakes.typesystem.type.refsem.
Medication_Type
org.apache.ctakes.typesystem.type.refsem.
Procedure_Type
org.apache.ctakes.typesystem.type.refsem.
SignSymptom_Type
org.apache.ctakes.typesystem.type.refsem.
Time_Type
org.apache.ctakes.typesystem.type.refsem.
EventProperties_Type
org.apache.ctakes.typesystem.type.syntax.
Lemma_Type
org.apache.ctakes.coreference.type.
MarkablePair_Type
org.apache.ctakes.typesystem.type.structured.
Metadata_Type
org.apache.ctakes.typesystem.type.refsem.
OntologyConcept_Type
org.apache.ctakes.typesystem.type.refsem.
UmlsConcept_Type
org.apache.ctakes.typesystem.type.util.
Pair_Type
org.apache.ctakes.coreference.type.
Pair_Type
org.apache.ctakes.typesystem.type.util.
Pairs_Type
org.apache.ctakes.typesystem.type.util.
ProbabilityDistribution_Type
org.apache.ctakes.typesystem.type.relation.
Relation_Type
org.apache.ctakes.typesystem.type.relation.
AttributeRelation_Type
org.apache.ctakes.typesystem.type.relation.
DegreeOf_Type
org.apache.ctakes.typesystem.type.relation.
BinaryTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
CoreferenceRelation_Type
org.apache.ctakes.typesystem.type.syntax.
StanfordDependency_Type
org.apache.ctakes.typesystem.type.relation.
UMLSRelation_Type
org.apache.ctakes.typesystem.type.relation.
CollectionTextRelation_Type
org.apache.ctakes.typesystem.type.relation.
ElementRelation_Type
org.apache.ctakes.typesystem.type.relation.
Affects_Type
org.apache.ctakes.typesystem.type.relation.
LocationOf_Type
org.apache.ctakes.typesystem.type.relation.
ManifestationOf_Type
org.apache.ctakes.typesystem.type.relation.
ResultOf_Type
org.apache.ctakes.typesystem.type.relation.
TemporalRelation_Type
org.apache.ctakes.typesystem.type.textsem.
SemanticRoleRelation_Type
org.apache.ctakes.typesystem.type.relation.
RelationArgument_Type
org.apache.ctakes.typesystem.type.structured.
SourceData_Type
org.apache.ctakes.assertion.medfacts.cleartk.
TrainAssertionModel
org.apache.ctakes.constituency.parser.treekernel.
TreeExtractor
org.apache.ctakes.coreference.treekernel.training.
TreeKernelTrainer
(implements org.apache.ctakes.coreference.util.
ThreadDelegator
)
org.apache.ctakes.constituency.parser.util.
TreeUtils
org.apache.ctakes.dictionary.lookup.filter.
TruncateCollectionFilterImpl
(implements org.apache.ctakes.dictionary.lookup.filter.
CollectionFilter
)
org.apache.ctakes.smokingstatus.util.
TruthValue
org.apache.ctakes.preprocessor.
Utility
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl
(implements org.apache.ctakes.dictionary.lookup.phrasebuilder.
PhraseBuilder
)
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.AttributeTextImpl
org.apache.ctakes.dictionary.lookup.phrasebuilder.
VariantPhraseBuilderImpl.OriginalTextImpl
org.apache.ctakes.dependency.parser.ae.util.
WriteClearParserDescriptors
org.apache.ctakes.utils.xcas_comparison.
XcasAnnotation
(implements java.lang.Cloneable, java.lang.Comparable<T>)
org.apache.ctakes.utils.xcas_comparison.
XcasDiff
org.apache.ctakes.utils.xcas_comparison.
XcasFile
(implements java.lang.Cloneable)
org.apache.ctakes.relationextractor.knowtator.
XMLReader
Interface Hierarchy
org.apache.ctakes.core.fsm.token.
BaseToken
org.apache.ctakes.core.fsm.token.
CharacterToken
org.apache.ctakes.core.fsm.token.
PunctuationToken
org.apache.ctakes.core.fsm.token.
SymbolToken
org.apache.ctakes.core.fsm.token.
ContractionToken
org.apache.ctakes.core.fsm.token.
DecimalToken
org.apache.ctakes.core.fsm.token.
EolToken
org.apache.ctakes.core.fsm.token.
IntegerToken
org.apache.ctakes.core.fsm.token.
NumberToken
org.apache.ctakes.core.fsm.token.
DecimalToken
org.apache.ctakes.core.fsm.token.
PunctuationToken
org.apache.ctakes.core.fsm.token.
SymbolToken
org.apache.ctakes.core.fsm.token.
TextToken
org.apache.ctakes.core.fsm.token.
WordToken
org.apache.ctakes.core.fsm.token.
WordToken
org.apache.uima.collection.base_cpm.CasProcessor
org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor, org.apache.uima.resource.ConfigurableResource)
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.uima.collection.base_cpm.CasObjectProcessor
org.apache.uima.collection.CasConsumer (also extends org.apache.uima.resource.ConfigurableResource)
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.chunker.ae.
ChunkCreator
org.apache.ctakes.dictionary.lookup.filter.
CollectionFilter
org.apache.ctakes.smokingstatus.
Const
org.apache.ctakes.necontexts.
ContextAnalyzer
org.apache.ctakes.necontexts.
ContextHitConsumer
org.apache.ctakes.dictionary.lookup.
Dictionary
org.apache.ctakes.drugner.
DrugModel
org.apache.ctakes.dictionary.lookup.strtable.
FieldConstraint
org.apache.ctakes.core.resource.
FileResource
org.apache.ctakes.core.fsm.machine.
FSM
org.apache.ctakes.core.resource.
JdbcConnectionResource
org.apache.ctakes.dictionary.lookup.algorithms.
LookupAlgorithm
org.apache.ctakes.dictionary.lookup.vo.
LookupAnnotation
org.apache.ctakes.dictionary.lookup.vo.
LookupToken
org.apache.ctakes.dictionary.lookup.ae.
LookupConsumer
org.apache.ctakes.dictionary.lookup.ae.
LookupInitializer
org.apache.ctakes.core.resource.
LuceneIndexReaderResource
org.apache.ctakes.lvg.resource.
LvgCmdApiResource
org.apache.ctakes.core.resource.
MaxentModelResource
org.apache.ctakes.dictionary.lookup.
MetaDataHit
org.apache.ctakes.dictionary.lookup.
MetaDataHitConst
org.apache.ctakes.core.ae.
OverlapAnnotator.Action
org.apache.ctakes.constituency.parser.
ParserWrapper
org.apache.ctakes.dictionary.lookup.phrasebuilder.
PhraseBuilder
org.apache.ctakes.dictionary.lookup.filter.
PostLookupFilter
org.apache.ctakes.dictionary.lookup.filter.
PreLookupFilter
org.apache.ctakes.preprocessor.
PreProcessor
org.apache.ctakes.relationextractor.ae.features.
RelationFeaturesExtractor
org.apache.uima.resource.Resource
org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor, org.apache.uima.resource.ConfigurableResource)
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.uima.resource.ConfigurableResource
org.apache.uima.collection.CasConsumer (also extends org.apache.uima.collection.base_cpm.CasObjectProcessor)
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.cc.
NonTerminalConsumer
org.apache.ctakes.core.resource.
StringIntegerMapResource
org.apache.ctakes.core.resource.
StringMapResource
org.apache.ctakes.core.resource.
StringsResource
org.apache.ctakes.core.ci.
TextModifier
org.apache.ctakes.coreference.util.
ThreadDelegator
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
org.apache.ctakes.coreference.eval.helpers.
PairType
org.apache.ctakes.coreference.eval.helpers.
MatType
org.apache.ctakes.coreference.eval.helpers.
KAlphaType
org.apache.ctakes.coreference.eval.helpers.
CEAFType
org.apache.ctakes.coreference.eval.helpers.
B3Type
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