All Classes

AbstractBaseDictionary AbstractBaseMetaDataHit AbstractClassifier ADJP ADJP_Type ADVP ADVP_Type Affects Affects_Type AffectsTextRelation AffectsTextRelation_Type AnaphoricityAttributeCalculator AnatomicalSite AnatomicalSite_Type AnatomicalSiteMention AnatomicalSiteMention_Type Annotation AnnotationCounter AnnotationSelector AnnotationTreeUtils AnnotOffsetComparator ApproximateMath ApproximateSimilarity ArgumentInfo ArgumentInfo ArgumentOrderFeatureExtractor AspectualTextRelation AspectualTextRelation_Type Assertion Assertion_Type AssertionAnalysisEngine AssertionCleartkAnalysisEngine AssertionComponents AssertionCuePhraseAnnotation AssertionCuePhraseAnnotation_Type AssertionCuePhraseConsumerImpl AssertionEvaluation AssertionEvaluation.HashableAnnotation AssertionEvaluation.OnlyGoldAssertions AssertionEvaluation.Options AssertionEvaluation.ReferenceAnnotationsSystemAssertionClearer AssertionEvaluation.ReferenceIdentifiedAnnotationsSystemToGoldCopier AssertionEvaluation.ReferenceSupportingAnnotationsSystemToGoldCopier AssertionEvaluation.ReplaceCTakesEntityMentionsAndModifiersWithGold AssertionSampleFeatureGenerator AssociatedCodeElement AssociatedCodeToken AssociatedPrimaryCodeElement AssociatedSecondaryCodeElement Attribute Attribute_Type AttributeCalculator AttributeRelation AttributeRelation_Type AttributeValue AttributeValue_Type B3Type BaseDictionaryImpl Baseline1DegreeOfRelationExtractorAnnotator Baseline1EntityMentionPairRelationExtractorAnnotator Baseline2DegreeOfRelationExtractorAnnotator Baseline2EntityMentionPairRelationExtractorAnnotator Baseline3DegreeOfRelationExtractorAnnotator Baseline3EntityMentionPairRelationExtractorAnnotator BaseLookupConsumerImpl BaseLookupConsumerImpl.LookupHitKey BaseMetaDataHitImpl BaseToken BaseToken BaseToken_Type BaseTokenAdapter BaseTokenAdapter BaseTokenImpl BaseTokenImpl BinaryTextRelation BinaryTextRelation_Type BodyLaterality BodyLaterality_Type BodyLateralityModifier BodyLateralityModifier_Type BodySide BodySide_Type BodySideModifier BodySideModifier_Type BooleanLabeledFS BooleanLabeledFS_Type BooleanLabeledTree BooleanLabeledTree_Type BuildPear BuildPipelinePears Cache CasConsumer CASConsumerTestDriver CasIndexer CategoricalDistribution CdaCasInitializer CEAFType CharacterOffsetToLineTokenConverterCtakesImpl CharacterToken CharacterTokenAdapter CharacterTokenAdapter CheckKnowtatorAnnotations Chi2FeatureSelection Chunk Chunk_Type ChunkAdjuster ChunkAdjusterTests ChunkAnnotation ChunkAnnotation_Type ChunkCreator Chunker ChunkerTests ChunkingExtractor ClassifiableEntries ClassifiableEntry ClearDependencyUtility ClearNLPDependencyParserAE ClearNLPPOSTaggerAE ClearNLPSemanticRoleLabelerAE ClearPOSUtility ClinicalNotePreProcessor ClinicalNotePreProcessorTest CollectionFilter CollectionTextRelation CollectionTextRelation_Type CombineCondition CommandLine CommandLine.IntegerRanges CommandLineParserUtil Compare ComplicatesDisruptsTextRelation ComplicatesDisruptsTextRelation_Type Concept Concept_Type ConceptConverterAnalysisEngine ConceptLookup ConditionalCleartkAnalysisEngine ConditionalModifier ConditionalModifier_Type ConfidenceScoreElement ConfidenceScoreToken CONJP CONJP_Type ConllDependencyNode ConllDependencyNode_Type Const CONST Const Constants Constants ConstituencyParser ConstraintConstructor ConstraintConstructorFindContainedBy ConstraintConstructorFindContainedWithin ConsumeNamedEntityRecordModel ContainsSetTextValueCondition ContextAnalyzer ContextAnalyzerAdapter ContextAnnotation ContextAnnotation_Type ContextAnnotator ContextAnnotatorTests ContextDependentTokenizerAnnotator ContextHit ContextHitConsumer ContextHitConsumerAdapter ContractionResult ContractionsPTB ContractionToken ContractionToken ContractionToken_Type ContractionTokenAdapter ConvertAndCompare Converti2b2AnnotationsToCTAKES ConvertXMIAssertionsToi2b2Format CopyAnnotator CopyDrugAnnotator CorefConsts CoreferenceRelation CoreferenceRelation_Type CounterMap CounterTreeMap Course Course_Type CourseModifier CourseModifier_Type CoveredTextToValuesExtractor CoveredTextToValuesExtractor.StringToDoublesProcessor CpeTests CreateAssertionDescriptor CreateAssertionLuceneIndexFromDelimitedFile CtakesFileNamer CtakesFileNamer CueWordTest CueWordTest2 Date Date_Type DateAnnotation DateAnnotation_Type DateAttributeValue DateAttributeValue_Type DateFSM DateParser DateToken DayNightWordCondition DebugConsumerImpl DecimalCondition DecimalRangeCondition DecimalStrengthAnnotation DecimalStrengthAnnotation_Type DecimalStrengthFSM DecimalStrengthStatusCondition DecimalStrengthToken DecimalToken DecimalTokenAdapter DecimalTokenAdapter DecimalValueCondition DefaultChunkCreator DegreeOf DegreeOf_Type DegreeOfRelationExtractorAnnotator DegreeOfTextRelation DegreeOfTextRelation_Type Delim DemMarkable DemMarkable_Type Demographics Demographics_Type DependencyFileCollectionReader DependencyNodeWriter DependencyParseUtils DependencyPath DependencyPathFeaturesExtractor DependencyTreeFeaturesExtractor DependencyUtility Dictionary DictionaryEngine DictionaryException DictionaryLookupAnnotator DirectLookupInitializerImpl DirectPassThroughImpl DiseaseDisorder DiseaseDisorder_Type DiseaseDisorderMention DiseaseDisorderMention_Type DisjoinCondition DocTimeRelAnnotator DocumentClassification DocumentClassification_Type DocumentID DocumentID DocumentID_Type DocumentID_Type DocumentIDAnnotationUtil DocumentIdPrinterAnalysisEngine DocumentMetaData DocumentSection DosageCondition DosageElement DosagesAnnotation DosagesAnnotation_Type DosagesFSM DosageToken DrugChangeStatusAnnotation DrugChangeStatusAnnotation_Type DrugChangeStatusCondition DrugChangeStatusElement DrugChangeStatusFSM DrugChangeStatusToken DrugLookupWindowAnnotation DrugLookupWindowAnnotation_Type DrugMention DrugMentionAnnotation DrugMentionAnnotation_Type DrugMentionAnnotator DrugModel DTDloader DurationAnnotation DurationAnnotation_Type DurationElement DurationFSM DurationToken DxContextAnalyzerImpl DxContextHitConsumerImpl DxIndicatorFSM EditDistance Element Element_Type ElementRelation ElementRelation_Type EndOfSentenceScannerImpl Entity Entity_Type EntityMention EntityMention_Type EntityMentionPairRelationExtractorAnnotator EntitySpanFeatureExtractor EnvironmentVariable EolToken Evaluation_ImplBase Evaluation_ImplBase.CopyFromGold Evaluation_ImplBase.CopyNPChunksToLookupWindowAnnotations Evaluation_ImplBase.EntityMentionRemover Evaluation_ImplBase.Options Evaluation_ImplBase.SegmentsFromBracketedSectionTagsAnnotator Evaluation_ImplBase.XMIReader Evaluation_ImplBase.XMIWriter EvaluationOfAnnotationSpans_ImplBase EvaluationOfClearTKEventSpans EvaluationOfClearTKTimeSpans EvaluationOfEventProperties EvaluationOfEventProperties.ClearEventProperties EvaluationOfEventSpans EvaluationOfEventSpans.Options EvaluationOfTemporalRelations EvaluationOfTemporalRelations.RemoveCrossSentenceRelations EvaluationOfTemporalRelations.RemoveNonTLINKRelations EvaluationOfTemporalRelations.RemoveRelations EvaluationOfTimeSpans Event Event_Type EventAnnotator EventContextAnalysisConsumer EventContextAnalysisPipeline EventContextAnalysisPipeline.Options EventMention EventMention_Type EventProperties EventProperties_Type EventTimeFlatTreeFeatureExtractor EventTimeRelationAnnotator ExtractionPrepAnnotator FeatureSelection FeatureVector FieldConstraint FieldConstraintImpl FileLocator FileResource FileResourceImpl FilesInDirectoryCasConsumer FilesInDirectoryCollectionCyclicalReads FilesInDirectoryCollectionReader FilterAnnotator FilterException FirstTokenPermLookupInitializerImpl FirstTokenPermutationImpl FlatTreeFeatureExtractor FormAnnotation FormAnnotation_Type FormCondition FormElement FormFSM FormToken FractionAnnotation FractionAnnotation_Type FractionCondition FractionFSM FractionStrengthAnnotation FractionStrengthAnnotation_Type FractionStrengthCondition FractionStrengthFSM FractionStrengthToken FractionToken FractionToken FragmentUtils FrequencyAnnotation FrequencyAnnotation_Type FrequencyElement FrequencyFSM FrequencyToken FrequencyUnitAnnotation FrequencyUnitAnnotation_Type FrequencyUnitCondition FrequencyUnitElement FrequencyUnitFSM FrequencyUnitToken FSIteratorToList FSM FSUtil GenerateTrainingData GenericAttributeAnalysisEngine GenericAttributeClassifier GenericCleartkAnalysisEngine GenericFeaturesExtractor GenericMetaDataHitImpl GenericModifier GenericModifier_Type GoldAnnotationAnalysisPipeline GoldAnnotationAnalysisPipeline.Options GoldAnnotationStatsCalculator GoldEntityAndAttributeReader GoldEntityAndAttributeReaderPipeline GoldEntityAndAttributeReaderPipelineForSeedCorpus GoldEntityAndRelationReader GoldEntityAndRelationReaderPipeline GoldEntityReader GoldStandardLabeler Heading Heading_Type HistoryAttributeClassifier HistoryCleartkAnalysisEngine HistoryFeaturesExtractor HistoryOfModifier HistoryOfModifier_Type HobbsTreeNavigator HourMinuteCondition HtmlTableCasConsumer HyphenatedDrugFSM HyphenatedDrugToken HyphenatedPTB HyphenTextModifierImpl HyphenTextModifierImplTests I2B2Challenge2010CollectionReader IdentifiedAnnotation IdentifiedAnnotation_Type IdentifiedAnnotationFeatureExtractor IdentifiedAnnotationFeatureExtractor.StringToDoublesProcessor IllnessDxIndicator IndentStartState InstallPearSilently InstallPearSilently.RunInstallation InstallPipelineFromPears IntegerCondition IntegerRange IntegerRangeCondition IntegerToken IntegerTokenAdapter IntegerTokenAdapter IntegerValueCondition INTJ INTJ_Type JCasUtil JCasUtil JdbcCollectionReader JdbcConnectionResource JdbcConnectionResourceImpl JdbcDictionaryImpl KAlphaType Kernel KernelMatrixCompositor KnowtatorAnnotation KnowtatorAnnotation.Span KnowtatorXMLParser KuRuleBasedClassifierAnnotator Lab Lab_Type LabDeltaFlag LabDeltaFlag_Type LabDeltaFlagModifier LabDeltaFlagModifier_Type LabEstimatedModifier LabEstimatedModifier_Type LabInterpretationModifier LabInterpretationModifier_Type LabMention LabMention_Type LabReferenceRange LabReferenceRange_Type LabReferenceRangeModifier LabReferenceRangeModifier_Type LabValue LabValue_Type LabValueModifier LabValueModifier_Type Lemma Lemma_Type LinearKernel LinearKernelMatrixWriter LinesFromFileCollectionReader LinesFromFileStringsResourceImpl List List_Type ListFactory LocationOf LocationOf_Type LocationOfTextRelation LocationOfTextRelation_Type LookupAlgorithm LookupAnnotation LookupAnnotationToJCasAdapter LookupAnnotationToTokAdapter LookupConsumer LookupHit LookupInitializer LookupParseUtilities LookupParseUtilitiesRefactor LookupSpec LookupToken LookupTokenComparator LookupWindowAnnotation LookupWindowAnnotation_Type LST LST_Type LuceneDictionaryImpl LuceneDocumentMetaDataHitImpl LuceneIndexReaderResource LuceneIndexReaderResourceImpl LvgAnnotator LvgBaseTokenAnnotator LvgCmdApiResource LvgCmdApiResourceImpl ManagesTreatsTextRelation ManagesTreatsTextRelation_Type ManifestationOf ManifestationOf_Type ManifestationOfTextRelation ManifestationOfTextRelation_Type Mapper Markable Markable_Type MarkableDepUtils MarkablePair MarkablePair_Type MarkablePairSet MarkablePairSet_Type MarkableProb MarkableTreeUtils MatType MaxentModelResource MaxentParserWrapper MeasurementAnnotation MeasurementAnnotation_Type MeasurementFSM MeasurementToken Medication Medication_Type MedicationAllergyModifier MedicationAllergyModifier_Type MedicationDosage MedicationDosage_Type MedicationDosageModifier MedicationDosageModifier_Type MedicationDuration MedicationDuration_Type MedicationDurationModifier MedicationDurationModifier_Type MedicationEventMention MedicationEventMention_Type MedicationForm MedicationForm_Type MedicationFormModifier MedicationFormModifier_Type MedicationFrequency MedicationFrequency_Type MedicationFrequencyModifier MedicationFrequencyModifier_Type MedicationMention MedicationMention_Type MedicationRoute MedicationRoute_Type MedicationRouteModifier MedicationRouteModifier_Type MedicationStatusChange MedicationStatusChange_Type MedicationStatusChangeModifier MedicationStatusChangeModifier_Type MedicationStrength MedicationStrength_Type MedicationStrengthModifier MedicationStrengthModifier_Type Metadata Metadata_Type MetaDataHit MetaDataHitComparator MetaDataHitConst MetaDataPostLookupFilterImpl MipacqMarkableCreator MipacqMarkableExpander MipacqMarkablePairGenerator MipacqSvmChainCreator Modifier Modifier_Type ModifierExtractorAnnotator ModifierExtractorEvaluation ModifierExtractorEvaluation.OnlyGoldModifiers ModifierExtractorEvaluation.Options MutualInformationFeatureSelection MutualInformationFeatureSelection.CombineScoreMethod MutualInformationFeatureSelection.MutualInformationStats NamedEntityContextAnalyzer NamedEntityContextAnalyzer NamedEntityContextHitConsumer NamedEntityFeaturesExtractor NamedEntityFeaturesExtractorTest NamedEntityLookupConsumerImpl NamedState NegateCondition NegationAnnotatorTests NegationContextAnalyzer NegationContextAnalyzer NegationContextHitConsumer NegationFSM NegationFSM NegationIndicator NegativeContextAnalyzerImpl NegativeContextHitConsumerImpl NegContextInitializerImpl NegDxIndicatorFSM NegIndicatorFSM NEMarkable NEMarkable_Type NewlineToken NewlineToken_Type NewlineTokenAdapter NominalAttributeValue NominalAttributeValue_Type NonIndicator NonIndicatorFSM NonSmokerNamedEntityAnnotation NonSmokerNamedEntityAnnotation_Type NonSmokerNamedEntityLookupConsumerImpl NonTerminalConsumer NonTerminalEndState NormalizedFilesInDirectoryCasConsumer NP NP_Type NullAnnotator NumberCondition NumberToken NumberTokenAdapter NumberTokenAdapter NumericAttributeValue NumericAttributeValue_Type NumToken NumToken_Type O O_Type ODIEVectorFileWriter OffsetComparator OntologyConcept OntologyConcept_Type OpenNLPPOSCollectionReader OpenNLPPOSCollectionReaderTests OrangeBookFilterConsumerImpl OverlapAnnotator OverlapAnnotator.Action PADConsumerImpl PADHit PADHit_Type PADHitAnnotator PADLocation PADLocation_Type PADLocationConsumerImpl PADOffSetsRecord PADTerm PADTerm_Type PADTermConsumerImpl Pair Pair Pair_Type Pair_Type PairAttributeCalculator Pairs Pairs_Type PairType Paragraph Paragraph_Type ParamUtil ParentPtrTree ParserEvaluationAnnotator ParserTreeWriterConsumer ParserWrapper PartOfSpeechFeaturesExtractor PatientLevelSmokingStatus PatternMatch PcsClassifierAnnotator_libsvm PermutationUtil PersonTitleAnnotation PersonTitleAnnotation_Type PersonTitleFSM PersonTitleToken PETFeatureExtractor PhraseBuilder PhraseChunkingExtractor PhraseTypeChunkCreator PolarityCleartkAnalysisEngine PolarityModifier PolarityModifier_Type PolyKernel POSTagger POSTaggerTests PostLookupFilter PostLookupFilterGroupImpl PP PP_Type Predicate Predicate_Type PredicateArgumentExtractor PreLookupFilter PrepositionFeatureExtractor PreprocessAndWriteXmi PreprocessAndWriteXmi PreprocessAndWriteXmi.CopyDocumentTextToGoldView PreprocessAndWriteXmi.DocumentIDAnnotator PreprocessAndWriteXmi.Options PreprocessAndWriteXmi.Options PreprocessAndWriteXmi.SerializeDocumentToXMI PreprocessAndWriteXmi.SerializeDocumentToXMI PreProcessor PrintRelations PrintRelations.Options PrintRelationStatistics PrintRelationStatistics.Options ProbabilityDistribution ProbabilityDistribution_Type Procedure Procedure_Type ProcedureDevice ProcedureDevice_Type ProcedureDeviceModifier ProcedureDeviceModifier_Type ProcedureMention ProcedureMention_Type ProcedureMethod ProcedureMethod_Type ProcedureMethodModifier ProcedureMethodModifier_Type PronounMarkable PronounMarkable_Type PRT PRT_Type PSESentence PSESentence_Type PSESentenceAnnotator PSESentenceFeature PSESentenceFeature_Type PunctuationFeatureExtractor PunctuationToken PunctuationToken PunctuationToken_Type PunctuationTokenAdapter PunctuationTokenAdapter PunctuationValueCondition RadialogyTermLookup RadiologyRecordsCollectionReader RangeAnnotation RangeAnnotation_Type RangeCondition RangeDosageCondition RangeFSM RangeStrengthAnnotation RangeStrengthAnnotation_Type RangeStrengthCondition RangeStrengthFSM RangeStrengthToken RangeToken RangeToken RBFKernel RecordResolutionCasConsumer RecordSentence RecordSentence_Type RegressionPipelineTest Relation Relation_Type RelationAnnotationAnalysis RelationAnnotationAnalysis.Options RelationArgument RelationArgument_Type RelationExtractorAnnotator RelationExtractorAnnotator.IdentifiedAnnotationPair RelationExtractorAnnotatorsTest RelationExtractorConsumer RelationExtractorEvaluation RelationExtractorEvaluation.HashableArguments RelationExtractorEvaluation.Options RelationExtractorEvaluation.ParameterSettings RelationExtractorEvaluation.RemoveCTakesMentionsAndCopyGoldRelations RelationExtractorEvaluation.RemoveOtherRelations RelationExtractorEvaluation.RemoveSmallerEntityMentions RelationExtractorEvaluation.ReplaceCTakesMentionsWithGoldMentions RelationExtractorPipeline RelationExtractorPipeline.Options RelationExtractorPipelineSingleCas RelationExtractorTrain RelationExtractorTrain.Options RelationFeaturesExtractor RelationInfo RelationInfo ResolutionAnnotator ResultOf ResultOf_Type ResultOfTextRelation ResultOfTextRelation_Type RomanNumeralAnnotation RomanNumeralAnnotation_Type RomanNumeralCondition RomanNumeralFSM RomanNumeralToken RouteAnnotation RouteAnnotation_Type RouteCondition RouteElement RouteFSM RouteToken RowFillerThread RunCorpusDiagnostics RunCorpusDiagnostics.Options RunZoner SBAR SBAR_Type SearchResult SectionSegmentAnnotator Segment Segment_Type SegmentMetaData SemanticArgument SemanticArgument_Type SemanticRoleRelation SemanticRoleRelation_Type Sentence Sentence_Type SentenceAdjuster SentenceDetector SentenceDetectorCtakes SentenceSpan SESentence SESentence_Type SESentenceClassifierAnnotator SESentenceFeatureAnnotator SetValuePostLookupFilterImpl SEUtil Severity Severity_Type SeverityModifier SeverityModifier_Type SharpCorpusSplit SharpCorpusSplit.Subcorpus SHARPKnowtatorXMLDefaults SHARPKnowtatorXMLReader SideEffectAnnotation SideEffectAnnotation_Type SideEffectAnnotator SideEffectCasConsumer SideEffectSentenceCasConsumer SignSymptom SignSymptom_Type SignSymptomMention SignSymptomMention_Type SimpleSegmentAnnotator SimpleSegmentAnnotatorTests SimpleSegmentWithTagsAnnotator SimpleTree SingleDocumentProcessorCtakes SmokerNamedEntityAnnotation SmokerNamedEntityAnnotation_Type SmokerNamedEntityLookupConsumerImpl SmokingDocumentClassification SmokingDocumentClassification_Type SMOTEplus SourceData SourceData_Type Span Span Span SpanAlignment SpanOffsetComparator Splitter SRLUtility StanfordDependency StanfordDependency_Type StartDateElement Stats StatusAnnotatorTests StatusContextAnalyzer StatusContextHitConsumer StatusIndicator StatusIndicatorFSM StatusIndicatorFSM StrengthAnnotation StrengthAnnotation_Type StrengthCondition StrengthElement StrengthFSM StrengthToken StrengthUnitAnnotation StrengthUnitAnnotation_Type StrengthUnitCombinedCondition StrengthUnitCombinedToken StrengthUnitCondition StrengthUnitElement StrengthUnitFSM StrengthUnitToken StringAttributeValue StringAttributeValue_Type StringIntegerMapResource StringIntegerMapResourceImpl StringMapResource StringMapResourceImpl StringPreLookupFilterImpl StringsResource StringTable StringTableDictionaryImpl StringTableFactory StringTableRow StringTableRowMetaDataHitImpl SubjectAttributeAnalysisEngine SubjectAttributeClassifier SubjectCleartkAnalysisEngine SubjectFeaturesExtractor SubjectModifier SubjectModifier_Type SubSection SubSection_Type SubSectionAnnotation SubSectionAnnotation_Type SubSectionAnnotator SubSectionIndicator SubSectionIndicator SubSectionIndicatorFSM SubSectionPadIdFSM Subzone Subzone_Type SuffixFrequencyFSM SuffixFrequencyToken SuffixMaxentModelResourceImpl SuffixStrengthAnnotation SuffixStrengthAnnotation_Type SuffixStrengthFSM SuffixStrengthToken SurroundingExtractor SvmUtils SvmVectorCreator SymbolToken SymbolToken SymbolToken_Type SymbolTokenAdapter SymbolValueCondition SyntaxAttributeCalculator SystemTemporalRelationPrinter TagDictionaryCreator TagDictionaryCreatorTests TemporalEntityAnnotator_ImplBase TemporalPathExtractor TemporalPETExtractor TemporalRelation TemporalRelation_Type TemporalTextRelation TemporalTextRelation_Type TerminalTreebankNode TerminalTreebankNode_Type Test TestClearNLPAnalysisEngines TestClearNLPAnalysisEngines.DumpClearNLPOutputAE TestClearNLPAnalysisEngines.Options TestCosineSimilarity TestDriver TestUtil TextMatch TextMentionElement TextModification TextModifier TextSetCondition TextToken TextTokenAdapter TextValueCondition ThreadDelegator ThreadedDictionaryLookupAnnotator ThreadedUmlsDictionaryLookupAnnotator THYMEData THYMEKnowtatorXMLReader Time Time_Type TimeAnnotation TimeAnnotation_Type TimeAnnotator TimeCondition TimeFSM TimeMention TimeMention_Type TimeToken Token TokenConverter TokenConverter TokenFeaturesExtractor TokenFreqCasConsumer Tokenizer TokenizerAnnotator TokenizerAnnotatorPTB TokenizerAnnotatorPTBTests TokenizerHelper TokenizerPTB TokenOffsetsCasConsumer TopTreebankNode TopTreebankNode_Type TrainAssertionModel TreebankNode TreebankNode_Type TreeExtractor TreeFeatureConsumer TreeFragmentFeatureExtractor TreeKernel TreeKernelTrainer TreeUtils TruncateCollectionFilterImpl TruthValue UCP UCP_Type UmlsConcept UmlsConcept_Type UmlsDictionaryLookupAnnotator UMLSRelation UMLSRelation_Type UmlsToSnomedConsumerImpl UmlsToSnomedDbConsumerImpl UmlsToSnomedLuceneConsumerImpl UncertaintyCleartkAnalysisEngine UncertaintyModifier UncertaintyModifier_Type UncertaintyWordWindowExtractor UnknownSmokerNamedEntityAnnotation UnknownSmokerNamedEntityAnnotation_Type UnknownSmokerNamedEntityLookupConsumerImpl Utility Utils VariantPhraseBuilderImpl VP VP_Type WikiIndex WordNetFeatureExtractor WordNetUtils WordSetCondition WordToken WordToken WordToken_Type WordTokenAdapter WordTokenAdapter WordValueCondition WriteClearNLPDescriptors WriteClearNLPDescriptors.Options XcasAnnotation XcasDiff XcasFile XcasProcessor XmiCollectionReaderCtakes XmiCollectionReaderCtakes XMIReader XMIReader XMIReader XMIReader XmiWriterCasConsumerCtakes XMLReader XMLReader Zone Zone_Type ZoneAnnotator