org.apache.uima.java
true
edu.mayo.bmi.uima.sideeffect.ae.SideEffectAnnotator
side effect annotator
Rule-based side effect annotator
Mayo Clinic
sectionsToIgnore
section(s) not used for searching side effect
String
true
false
hasPatternOfDrugCauseVerbPse
list of CauseVerb used in this rule
String
true
true
hasPatternOfPseDueToDrug
list of DueTo words used in this rule
String
true
true
hasPatternOfDrugDueToPse
list of DueTo words used in this rule
String
true
true
hasPatternOfDiscontDrugBecausePse
list of Discont verbs used in this rule
String
true
true
sideEffectWord
list of sideEffectWord used in the rules of hasWordOfSideEffect and hasSideEffectAsPse
String
true
true
hasPatternOfNotePseWithDrug
list of Note verbs used in this rule
String
true
true
hasPatternOfDrugMadePse
list of Made verbs used in this rule
String
true
true
hasPatternOfPseAfterDrug
list of After words used in this rule
String
true
true
sectionsToIgnore
20101
20106
20109
20110
20111
20114
20117
20121
20123
20126
20127
20129
20130
20136
20138
hasPatternOfDrugCauseVerbPse
caused
induced
resulted
yielded
causing
inducing
resulting
yielding
hasPatternOfPseDueToDrug
due to
secondary to
because of
associated with
induced by
attributed to
hasPatternOfDrugDueToPse
due to
secondary to
because of
associates with
associate with
account for
accounts for
sideEffectWord
side effect
side effects
reaction
reactions
hasPatternOfNotePseWithDrug
noted
developed
reported
described
hasPatternOfDrugMadePse
made
hasPatternOfDiscontDrugBecausePse
discontinued
tapered
decreased
stopped
hasPatternOfPseAfterDrug
after taking
after starting
true
true
false
sideEffectTable
edu.mayo.bmi.uima.core.resource.FileResourceImpl
false
sideEffectDic
dictionary of drug side effect
file:sideeffectresources/lookup/sideEffect_dictionary.txt
edu.mayo.bmi.uima.core.resource.FileResourceImpl
sideEffectTable
sideEffectDic