#!/usr/bin/perl -w # overlap - print overlap between test pairs # # <@LICENSE> # Licensed to the Apache Software Foundation (ASF) under one or more # contributor license agreements. See the NOTICE file distributed with # this work for additional information regarding copyright ownership. # The ASF licenses this file to you under the Apache License, Version 2.0 # (the "License"); you may not use this file except in compliance with # the License. You may obtain a copy of the License at: # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # use vars qw($opt_a $opt_h $opt_t); use Getopt::Std; getopts("aht"); my $prog = $0; $prog =~ s@.*/@@; sub usage { my $status = shift; my $out = $status ? STDERR : STDOUT; print $out < $pair{$a} } keys %pair) { my ($a, $b) = split(/ /, $k); my $a_pct = $pair{$k} / $solo{$a}; my $b_pct = $pair{$k} / $solo{$b}; if ($opt_a) { printf "%d\t%.3f\t%.3f\t%s,%s\n", $pair{$k},$a_pct,$b_pct,$a,$b; printf "%d\t%.3f\t%.3f\t%s,%s\n", $pair{$k},$b_pct,$a_pct,$b,$a; } else { if (($a_pct > $b_pct) || ($a_pct == $b_pct && $a lt $b)) { printf "%d\t%.3f\t%.3f\t%s,%s\n", $pair{$k},$a_pct,$b_pct,$a,$b; } else { printf "%d\t%.3f\t%.3f\t%s,%s\n", $pair{$k},$b_pct,$a_pct,$b,$a; } } } sub read_file { my ($input) = @_; open(FILE, $input) || die "open failed: $input"; my $line = 0; while() { next if /^#/; if (/^[Y.]\s+-?\d+\s+\S+\s+(\S+)/) { my @tests = split(/,/, $1); @tests = grep { !/^T_/ } @tests if $opt_t; my $i = 0; for my $a (@tests) { $solo{$a}++; $pair{"$a $_"}++ for @tests[(++$i) .. $#tests]; } } else { die "$prog: error in input format in $input\n"; } } close(FILE); }